Suncus etruscus (white-toothed pygmy shrew): 126022098
Help
Entry
126022098 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: splicing factor 1-like
KO
K13095
splicing factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126022098
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
setr03041
]
126022098
Spliceosome [BR:
setr03041
]
Complex A
Other components
Complex A specific factors
126022098
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
zf-CCHC_5
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
126022098
NCBI-ProteinID:
XP_049638910
LinkDB
All DBs
Position
11:complement(65520387..65522110)
Genome browser
AA seq
474 aa
AA seq
DB search
MPTVIPPGLTPEQERAYIVQLQIEDLTRKLRTGDLGMPPNPEDRSPSPEPIYNSEGKRLN
TREFRTSKKLEEERHNLITEMVALNPDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGL
LIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKVGRKDGQMLPGENEPLHALVTANTMENV
KKAVEQIRNILKQGIETPEDQNDLRKMHLRELARLNGTLWEDDNRILRPWQSSETRSITN
TTVCTKCGGAGHIASDCKFQRPGDPQSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGP
ATTPLASAPRPAAPANNPPPPSLMSTTQSRPAWMNSSPSNSRPYXGMHGGGPGGPGGGPH
SFPHPLLSLTGGHGGHPMQHNPNGPLPPWMQPPPPPMNQDPHPPGHHGPPPIDQYLVGVY
RIKEKQQYGFHYPLAMAAKIPPCGSDGFPRPLVTLPGRQPQQRPWWTGWFGKAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcccacagttattcctcctggactcactccggaacaagagagagcttatatagtgcaa
ctgcagatagaagacctgactcgtaaactgcgcacaggagacctgggcatgccccctaac
cctgaggacaggtccccttcccctgagcccatctacaatagtgaggggaagcggctcaac
acccgagagtttcgtaccagcaaaaaactcgaggaggagcggcacaacctcatcacggaa
atggttgcactcaaccctgacttcaagccgcctgcagattacaaaccaccagcaacacgt
gtgagtgataaagtaatgattccacaagatgaatatccagaaatcaactttgtgggcttg
ctcattgggcccagagggaacaccttgaagaacatagagaaagaatgcaacgccaagatc
atgatccgggggaaagggtctgtgaaagaagggaaagtggggcgcaaagatggccagatg
ttgcctggggaaaatgagccacttcatgctctggttactgccaacaccatggagaatgtg
aagaaagcggtagaacagatcagaaacattctaaagcaggggattgagacccctgaggac
cagaatgacctccggaagatgcaccttcgggagttagctcgcttgaatgggaccctttgg
gaagacgataacaggatcttaagaccctggcaaagctcagagactcgcagcattaccaat
actacggtgtgcaccaagtgcggaggggccggccacattgcttccgactgtaaattccaa
aggcctggagacccccaatcagctcaggataaagcacggatggataaagaatatttgtcc
ctcatggctgaactgggggaagcacctgtcccagcatctgtgggctctacttctggccca
gcgaccacacctctggccagtgcacctcgacctgctgctcccgccaacaaccctcctcca
ccgtctctcatgtctaccactcagagccgccctgcttggatgaattccagtccttccaac
agtcgaccgtatnngggcatgcatggaggtggcccggggggtcctggaggtggcccgcac
agttttccacacccgttacttagcctgacaggtgggcacggtggacaccccatgcagcac
aacccgaatggaccactacctccatggatgcagccacctccgccaccgatgaaccaggac
ccccacccgcctgggcaccatggccctcctccaatagatcagtacctggttggggtctat
cgcatcaaggaaaagcagcagtatggcttccactacccccttgccatggcagcaaagatc
cctccctgcggcagcgatggctttccgcgcccattggtgacccttccaggcagacagcct
cagcagcgcccctggtggacaggatggttcggcaaagcagcctga
DBGET
integrated database retrieval system
