KEGG   Suncus etruscus (white-toothed pygmy shrew): 126022108
Entry
126022108         CDS       T09902                                 
Name
(RefSeq) tubulin alpha-1C chain-like
  KO
K07374  tubulin alpha
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145  Phagosome
setr04210  Apoptosis
setr04530  Tight junction
setr04540  Gap junction
setr04814  Motor proteins
setr05010  Alzheimer disease
setr05012  Parkinson disease
setr05014  Amyotrophic lateral sclerosis
setr05016  Huntington disease
setr05020  Prion disease
setr05022  Pathways of neurodegeneration - multiple diseases
setr05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:setr00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    126022108
  09143 Cell growth and death
   04210 Apoptosis
    126022108
  09144 Cellular community - eukaryotes
   04530 Tight junction
    126022108
   04540 Gap junction
    126022108
  09142 Cell motility
   04814 Motor proteins
    126022108
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    126022108
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    126022108
   05012 Parkinson disease
    126022108
   05014 Amyotrophic lateral sclerosis
    126022108
   05016 Huntington disease
    126022108
   05020 Prion disease
    126022108
   05022 Pathways of neurodegeneration - multiple diseases
    126022108
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setr03019]
    126022108
   03036 Chromosome and associated proteins [BR:setr03036]
    126022108
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:setr04812]
    126022108
   04147 Exosome [BR:setr04147]
    126022108
Messenger RNA biogenesis [BR:setr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     126022108
Chromosome and associated proteins [BR:setr03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     126022108
Cytoskeleton proteins [BR:setr04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    126022108
Exosome [BR:setr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   126022108
  Exosomal proteins of other body fluids (saliva and urine)
   126022108
  Exosomal proteins of colorectal cancer cells
   126022108
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 DUF7281
Other DBs
NCBI-GeneID: 126022108
NCBI-ProteinID: XP_049638916
LinkDB
Position
11:75166334..75203110
AA seq 534 aa
MPERFPRSPAGGAVPRAAHPLPRPAESHFRFLLRAGLALGSVGSGLVCASVLCNDGGDKG
ILDSISRCAPDDAPRNPRFLGSLPTQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQ
MLSDKTIRGGNDSFNTFFRETGTGKYVPRTVFVDLEPIVIDEIRTGTYCQLFHPEQLITG
KEDAANNYARGHYTIGKEIIDPVLDQIRKLADQCTGLQGFLVFRSFGGGTGSGFTSLLME
RLSVDYGKMSKLEFSVYPSPKVSTAVVEPYNSILTTHTTLEHSHCAFMVDNEAIFDICCR
NLDIERPTYKHLNRLISQVVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
KTKRSIQFVDWCPTGFKVGINYQPPTVVPGGNLAKVQRAVCMLSNTTAIAEAWARLNHKF
DLMYAKRAFIHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADSADGEDEDEEY
NT seq 1605 nt   +upstreamnt  +downstreamnt
atgcctgagcgcttccctcgttcgccagcaggcggagctgttccccgcgcagcccatccg
ctgccccgcccggccgaaagccacttccgcttcctcttgcgcgcggggctcgcgctgggc
tctgtcgggagtggccttgtttgtgcctctgtgctctgcaacgacggtggagataagggg
atcctggactctatttctcgctgcgctcccgatgacgcaccccgcaacccgcgctttctg
ggctccctccccacccagcgtgagtgcatctccatccacgttggccaggctggtgtccag
atcggcaatgcctgctgggagctctactgcctggaacacggcatccagcctgatggccag
atgctcagcgacaagaccatcaggggaggaaatgactccttcaacaccttcttccgtgaa
accggcactggcaaatatgtgcccaggactgtatttgtagacctggaacccatagtcatt
gatgaaattcgcactggcacctactgccagctcttccaccctgagcagctcatcacaggc
aaggaagatgctgccaataactatgctcgtgggcactacactattggcaaggagatcatt
gaccctgtcttggaccaaattcgtaaactagctgaccaatgcacaggtcttcagggcttc
ttggtgttccgcagctttggtgggggaaccggttctgggttcacttccctgctgatggaa
cgtctctctgtcgattatggcaagatgtccaagctcgagttctccgtatacccgtccccc
aaggtttccactgctgtggttgagccctacaactccatcctcaccacccacaccactctg
gagcactctcattgtgccttcatggtggacaatgaggccatctttgacatatgttgtagg
aatcttgatattgagcgcccgacctacaagcacctgaaccgccttattagccaggttgtg
tcctccatcaccgcttctctccgatttgatggcgccctgaatgttgacctgacagaattc
cagaccaacctggtgccctacccccgaattcatttccccctggccacatatgcccctgtc
atctctgctgagaaagcctaccatgagcagctttctgttgcagagatcaccaatgcatgc
tttgagccagccaaccagatggtgaaatgcgaccctcgccatggtaaatacatggcttgt
tgcctgttatatcgtggtgacgtggtccccaaagatgtcaatgctgccattgccaccatc
aagaccaagcgcagcatccagtttgtggactggtgtcccactggcttcaaggttggtatt
aattaccagcctcccactgtggttcctggtgggaacctggccaaggtccagcgagctgtg
tgcatgctgagcaacaccacagccattgctgaggcctgggctcgcctgaaccacaagttt
gatctgatgtatgccaagcgtgcctttattcactggtatgtgggtgagggcatggaggag
ggagagttctccgaagcccgtgaggacatggctgcccttgagaaggattacgaagaggtt
ggagcagacagtgctgatggggaggatgaagatgaagaatattaa

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