Suncus etruscus (white-toothed pygmy shrew): 126022167
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Entry
126022167 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin-like modifier-activating enzyme 1
KO
K03178
ubiquitin-activating enzyme E1 [EC:
6.2.1.45
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
setr05012
Parkinson disease
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126022167
09160 Human Diseases
09164 Neurodegenerative disease
05012 Parkinson disease
126022167
05022 Pathways of neurodegeneration - multiple diseases
126022167
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126022167
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126022167
Enzymes [BR:
setr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.45 E1 ubiquitin-activating enzyme
126022167
Ubiquitin system [BR:
setr04121
]
Ubiquitin-activating enzymes (E1)
Ubiquitin activating enzyme
126022167
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
126022167
Exosomal proteins of other body fluids (saliva and urine)
126022167
Exosomal proteins of colorectal cancer cells
126022167
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_E1_SCCH
ThiF
E1_UFD
E1_FCCH
E1_4HB
BilD_C
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
126022167
NCBI-ProteinID:
XP_049638970
LinkDB
All DBs
Position
11:87408179..87509234
Genome browser
AA seq
1134 aa
AA seq
DB search
MARIHFPSAANFSRTLCTFNLKRCTQRGFSCQERLAKRSSSAKKRQKLRKLTVVVWSSES
GSFGSSPVGRRSFRPAXSSSLSKIRCMSGPDPKPGSNCSPAHSVLSEVSSVPTNGMARNG
SEADIDEGLYSRQLYVLGHEAMKRLQTSSVLVSGLRGLGVEIAKNLILGGVKAVTLHDQG
VAQWADLSSQFYLREEDIGKNRAEVSQPRLAELNSYVPVSAYTGPLVEDFLSNFQVVVLT
NTPLENQLRIGEFCHSRGLKLVVADTRGLFGQLFCDFGEEMILTDVNGEQPLSAMVSMVT
KESPGVVTCLDEARHGFESGDLVSFSEVQGMIELNGSPPMEIKVLGPYTFSICDTSNFSD
YIRGGIVSQVKVPKKISFKSLLASLAEPDFVMTDFAKCCRPVQLHIGFQALHYFCAQHGR
LPRPRNEQDATQLVALAQAVNARATLGVHQNSLDEDLIRQLSYVAAGDLAPINAFIGGLA
AQEVMKACSGKFMPIMQWLYFDALECLPEDKAALTEEKCLPRQNRYDGQVAVFGSDLQEK
LSKQKYFLVGAGAIGCELLKNFAMIGLGCGEGGEIIVTDMDTIEKSNLNRQFLFRPWDVT
KLKSDIAVAAVQQMNPHIRVTSHQNRVGPDTEQIYDDDFFQNLDGVTNALDNVDARMYMD
RRCVYYRKPLLESGTLGTKGNVQVVIPFLTESYSSSQDPPEKSIPICTLKNFPNAIEHTL
QWARDEFEGLFKQPAENVNQYLTDPKFLERTLRLTGTQPLEVLEALQRSLLLQRPQSWAD
CVIWACHHWHTQYSHNIQQLLHNFPPYQLTSSGAPFWSGPKRCPHPLTFDVSNPLHLDYV
MAAANLFAQTYGLAGSQDRAAVAILLQTVQIPEFTPKSGLKIHVSDQELQSANASVDDSH
LEELKATLTSPEKLPGFKMYPIDFEKDDDSNFHMDFIVAASNLRAENYDIPPADRHKSKL
IAGKIIPAIATTTAAVVGLVCLELYKVVQGHRQLVSYKNGFLNLALPFFGFSEPLAAPRH
QFYNQEWTLWDRFEVQGLQPNGEEMTLRQFLDYFKTEHKLEITMLSQGVSMLYSFFMPAA
KLKERLDQSVTEIMSRVSKRKLGRHVRALVLELCCNDETGEDVEVPYVRYTIHR
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atggccaggattcactttccatctgctgcaaattttagtcgtaccttatgcactttcaat
cttaagcggtgcactcaacgcggatttagttgtcaagaaagactagcaaaacgaagttct
tcagcaaaaaagagacaaaaattaagaaagctgaccgtggtggtttggtcttccgagtct
ggaagcttcggctcttctccagtaggaaggcgaagcttccgccccgccnncagctcgtcg
ctgtctaaaatacgttgcatgtccgggcctgatccaaagccgggttctaactgctcccct
gcccattctgtgttgtccgaagtatcttcagtaccaaccaacggaatggcgaggaacggc
agtgaagccgacatagatgaaggtctctactcccggcaactgtatgtgttgggccatgag
gccatgaaaaggctgcagacatccagcgtactggtctcaggcttgcggggcctaggtgtg
gagatcgccaagaacctcatccttggtggggtcaaggcagtcaccctacacgaccaaggc
gtcgctcagtgggctgacctctcctctcagttctacctacgggaggaggacattggtaaa
aaccgtgctgaggtctcccagccccgccttgctgaactcaacagttatgtacctgtcagt
gcctacactgggcccttggtggaggacttccttagtaattttcaggttgtggtcctcacc
aatacccctctggagaatcagctacgaattggggagttctgtcatagccgaggcctcaag
ctggtggtggcagacaccaggggcctatttggacagctcttctgtgactttggagaggaa
atgatcctcacagatgtcaacggagagcagcctctcagtgccatggtttctatggttacc
aaggagagccctggtgtggttacctgcctggatgaagcccgacatgggtttgaaagtggt
gacttggtctccttttcagaagtacagggcatgatcgagcttaacggaagtccgcccatg
gaaattaaagttttgggtccctatacgtttagcatctgtgacacttctaacttctctgac
tatatccgcggaggcattgtcagtcaggtcaaagtacccaagaagatcagctttaagtct
ttgctggcctcactggcagaacctgattttgtgatgacagattttgctaagtgctgtcgc
cctgtgcagctgcacattggcttccaggccttacactacttctgtgctcagcatggccgg
ctacctcgacctcgcaatgagcaggatgccactcagcttgtggccctggcacaggcggtg
aatgctcgagccactctaggagtacaccaaaatagcctggatgaagatcttatccggcag
ttgtcctatgtggctgctggggatctagcccccataaatgctttcatagggggcttggct
gcccaggaggtcatgaaggcctgctccgggaagtttatgcccatcatgcagtggctatat
tttgatgcccttgagtgtcttcctgaagataaagcggccctcacagaggaaaagtgtctc
ccacgccagaaccgttatgatggacaggtagctgtctttggctcagaccttcaagaaaag
ttaagcaagcagaagtactttttggtcggtgcaggagccattggctgtgagctgctcaag
aattttgccatgattgggttgggctgtggggagggcggtgaaattattgtcacagacatg
gacaccatcgagaagtcaaatctgaatagacaatttctgttccgtccctgggatgttacg
aagttaaagtctgatatagctgtggctgctgtgcaacagatgaacccccacattcgagtg
acaagccaccagaaccgtgtgggccctgatacagagcagatctatgatgatgatttcttc
caaaacctggatggagtgactaatgccttggacaatgtggatgcccggatgtacatggat
cgccgctgtgtgtactatcgtaagccactactagagtcaggcactctgggcaccaagggc
aatgtacaggtggtgatccccttcctgacagagtcatacagctctagccaggacccacct
gaaaagtccatccccatctgcaccctgaagaacttcccaaatgccatcgaacacaccctg
cagtgggctcgggatgagtttgaaggcctcttcaagcagcctgcagaaaatgtaaaccag
tatctcacagaccccaagtttttggagagaacactgcgtttgacaggcacccaacctctg
gaggtgctggaggcactgcaacgcagcctgctgctgcagcggccacagtcttgggctgat
tgtgtcatctgggcctgccaccactggcacacccagtactctcacaacatccaacagctg
ttgcacaacttccctccttaccagctcacaagttctggagcccctttctggtctgggccc
aaacgctgtccacacccacttacctttgatgtcagcaatccactgcatctggactatgtg
atggctgctgccaatctctttgcccagacctatgggctggcaggctctcaggaccgtgct
gctgtggccatcctcctccagactgtgcagattccagagttcacccccaagtctggcctc
aagatccatgtctcagaccaagagctgcaaagtgccaatgcctctgttgacgacagtcat
ctagaggaactcaaggctacactgaccagcccagaaaagctgcctggattcaagatgtac
cccatcgattttgagaaggatgatgatagcaatttccatatggattttattgtggctgca
tctaacctccgggctgagaactatgacattccccctgcagacaggcacaagagcaaatta
attgctgggaagatcattccagccattgccaccaccacagcagctgtggttggccttgta
tgtctggagttgtacaaagtggtacaggggcaccgacagctcgtctcctataagaatggt
tttctcaatttagcccttccattttttggattctctgaaccccttgctgcacctcgtcac
cagttctataaccaagaatggacattgtgggatcgctttgaggtacaggggctacagcct
aatggtgaagagatgaccctcagacagttccttgactactttaagacagagcataagttg
gagatcaccatgctgtcccagggggtatctatgctctactctttcttcatgccagctgca
aagctcaaggaacggttggatcagtcagtgacagagatcatgagccgtgtgtcaaagcga
aagttggggcgccatgtgagggcgctggtgcttgagctgtgctgcaacgatgagaccggc
gaggatgtcgaggtcccctatgtacgttacaccatccaccgataa
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integrated database retrieval system
