Suncus etruscus (white-toothed pygmy shrew): 126022251
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Entry
126022251 CDS
T09902
Symbol
PRDM4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04722
Neurotrophin signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
126022251 (PRDM4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126022251 (PRDM4)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
126022251 (PRDM4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
Zn_ribbon_PRDM4
zf-C2H2
zf-C2H2_4
C2CH-3rd_BIRD-IDD
SET
zf-C2H2_16
zf-met
zf-C2H2_jaz
PyrI_C
Zn_ribbon_Com
Motif
Other DBs
NCBI-GeneID:
126022251
NCBI-ProteinID:
XP_049639069
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Position
11:39852658..39883954
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AA seq
800 aa
AA seq
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MPHRMNEMNLSPVGMEPLTSSSVSNALPVSGSHLGLAASPTHNTIPAPGLPVAIPNLGPS
LSSLPSALSLMLPMGIGDRGVMCGLPERNYTLPPPPYPHLESSYFRTILPGILSYLADRP
PPQYIHPNSINVDSNSALSIANNPSALDPYQSNGTVGLESGIVSIDSRAVNSHGTQSLHP
SDGHEVALDTTITMENVSRVTSPISTDGMAEELAMDGVAGEHPQIPSGTRSHEPLSVDSV
SSNLTADTVGHGGVLPMHGSGLELPVVMETDHIASRVSGISDNALSDSIHTVAMSTNSVS
VALSTSHNLASLESVSLHEVGLSLEPVAVSSISQEVAMGTGHVDVSSDSLSFVSPSLQME
DSNSNKENMATLFTIWCTLCDRAYPSDCPDHGPVTFVPDTPIESRARLSLPKQLALRQSI
LGADIGVWAAETIPVRTCFGPLIGQQSHSMEVAEWTDKAVNHIWKIYHNGVLEFCIITTD
ENECNWMMFVRKARNREEQNLVAYPHDGKIYFCTSQDIPPENELLFYYSRDYAQQMGVPE
HPDVHLCNCGKECNSYAEFKAHLTSHIHSHLPSQGHSGSHGPNHSKERKWKCSMCPQAFI
SPSKLHVHFMGHMGMKPHKCDFCSKAFSDPSNLRTHLKIHTGQKNYRCALCDKSFTQKAH
LESHMVIHTGEKNLKCDYCDKLFMRRQDLKQHVLIHTQERQIKCPKCDKLFLRTNHLKKH
LNSHEGKRDYVCEKCTKAYLTKYHLTRHLKTCKGPTSSSSAQEEEEEEDSEEEELADSVG
TEDCQINSAVYGDEPLSAHK
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgcctcacaggatgaatgaaatgaacctgagcccagtggggatggagccactgacttcg
tcctctgtgagcaatgccttgccagtgtcaggaagccacctgggcttggctgcctccccc
acgcacaataccatccctgctccaggcctgccagtggcaattccaaacttgggtccctcc
ctgagctctctgccttctgctttgtctctaatgctcccaatgggcattggggatcgagga
gtgatgtgtggattacctgaaagaaactataccctacctccaccaccttacccccacctg
gagagcagttacttcagaaccatcctacctggcattttatcttatttagctgatcgacca
cctcctcagtatatccatcccaactcaataaatgttgacagtaattcagcactatctatc
gccaataacccatcggctcttgatccttatcaatccaatggaacagtgggattagaatca
ggcatcgtttcaattgactctcgcgctgtgaactcacatggcactcaaagtcttcatcct
agtgatggccacgaggtggccttggacaccactattactatggagaatgtctcacgggtt
actagcccgatctccaccgatggcatggcagaagagcttgcgatggacggtgtggcaggg
gaacacccccagatccccagtggtactcggagtcatgagccactctctgtggattctgtg
agcagcaacctcacggcggatactgtgggccacggcggggtactccccatgcacgggagt
ggcttggaactgcctgtagtgatggagacagaccacattgctagccgtgtcagtggcata
tctgacaatgccctcagcgactcgatccacaccgtggccatgagcaccaactctgtaagc
gtggcactctctacctcacacaacctcgcctccctagagtctgtttcccttcatgaagtg
ggcctcagcctagaacctgtggctgtgtcctccatcagccaggaggttgctatggggaca
ggtcatgtagatgtgtcttcagacagtctgtcttttgtgtcaccttcactgcaaatggaa
gactccaattcaaacaaggaaaacatggcaaccttgtttacaatttggtgtactttgtgt
gaccgagcctatccatctgattgccccgaccatggaccagtgacttttgttcctgatact
ccaatagagagcagagcaaggctttccctcccaaaacagctcgctctccgccagtcaatc
ctaggagcagacattggtgtttgggctgcagaaaccattccagtacggacttgctttggt
cctctcattggccagcagagtcactccatggaagtagcagaatggacagacaaggccgtc
aatcatatctggaagatataccacaatggtgttctagaattctgcatcattacaactgat
gaaaatgaatgtaattggatgatgtttgtgcgcaaagccaggaaccgggaagaacagaat
ttggtggcttatccccatgatggaaaaatttatttctgcacttcacaagatattcctcct
gaaaatgagctgctcttttattatagccgagattatgcacaacagatgggtgttcctgaa
cacccagatgtgcacctttgtaactgtggcaaggaatgcaattcctatgcagaatttaaa
gcccatctgacgagccacatccatagccatcttcctagccagggccacagcggcagccat
gggcccaaccacagcaaagaaaggaaatggaagtgttctatgtgcccacaggcatttatc
tctccatctaaactgcatgtccactttatgggccacatgggcatgaagccccacaagtgt
gatttttgtagcaaggcctttagtgatcccagcaacctgcggacccacctcaagatccac
acgggtcagaagaactacaggtgtgcattgtgcgataagtctttcacccagaaggctcat
ctggagtcccacatggtcatccatacgggtgagaagaacctcaagtgtgattactgtgac
aagctgttcatgcggaggcaagatctcaagcagcatgtgctcatccacacgcaagaacgc
cagatcaagtgtcccaagtgtgataaactgttcttgagaacaaatcacttaaagaaacac
ctcaattcacatgaaggaaaacgggactatgtatgtgagaaatgtacaaaggcctatctt
accaaatatcatctcactcgtcatctgaaaacttgcaaaggacccacttctagttcctca
gcacaggaggaagaggaagaggaggactctgaagaggaagagttagcagactctgtggga
acagaagactgtcagataaacagtgctgtgtatggagatgagcctctctctgcacataaa
taa
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