Suncus etruscus (white-toothed pygmy shrew): 126022264
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Entry
126022264 CDS
T09902
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03440
Homologous recombination
setr04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
126022264
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126022264
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126022264
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126022264
03036 Chromosome and associated proteins [BR:
setr03036
]
126022264
03400 DNA repair and recombination proteins [BR:
setr03400
]
126022264
Peptidases and inhibitors [BR:
setr01002
]
Metallo peptidases
Family M67
126022264
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
126022264
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
126022264
BRISC complex
126022264
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
126022264
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
126022264
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
126022264
NCBI-ProteinID:
XP_049639084
LinkDB
All DBs
Position
11:complement(41528611..41529519)
Genome browser
AA seq
294 aa
AA seq
DB search
MALQVMPAVQAVHLDSNAYLVCLSHALSTEKEEVMGLCIGEVNDDTSPQRSDAKFACIGS
ERHTVAEKVDTIKVIHIHSVIILRRSDKRKDRVEISPEQLSAASTEAERLAELTGRSMRV
VGWYHSHPHITVWPSHVDVRTQAMYQMMDQGFVGLIFSCFIEDKNTKTGRVLYTCFQSIQ
AQKSSEYERMEIPIHIVPHTTIGKVCLESAVELPKVLCQEEQDAYRRIHSLTHLDTVTKI
HNGSVFTKNLCSQMSAVSGPLLQWLEDRLEQNKEILQELQQEKEELLQELSSLE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggtgatgccagccgtgcaggcggttcacctggattccaacgcttacctc
gtctgcctcagccatgctctgagtaccgaaaaggaggaagtgatggggctgtgcatcggt
gaggtgaatgatgacaccagcccccaaaggagtgacgccaaatttgcatgcattggatct
gaacggcacacagttgctgaaaaggttgataccatcaaagtcattcacatccactctgtt
atcatcctgcgccgttctgacaagaggaaagaccgagtagaaatttctcctgagcagttg
tctgcagcctccacagaggcagagaggttggccgagcttacaggccgctccatgagagtg
gtgggctggtatcattcccaccctcacatcaccgtctggccttcccatgttgatgttcgc
acacaggccatgtatcaaatgatggatcaaggctttgtaggacttattttttcctgtttc
atagaagataaaaacacaaagactggcagggtactctacacttgctttcaatccatacag
gcccaaaagagctcagagtatgagagaatggaaatccctatccatatagtccctcacaca
accatcgggaaggtctgcctggaatcagcagtggagctgcccaaagtcctgtgccaggag
gaacaggacgcctacaggaggatccacagccttacacatctggacacagtcaccaagatc
cataatggttcagtattcacgaaaaacctctgcagtcagatgtcagctgtcagcgggcct
ctcctgcagtggttggaggacagactggaacaaaacaaagagattttgcaggaattgcag
caagaaaaggaggaacttttgcaagaactctcttctttggaataa
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