Suncus etruscus (white-toothed pygmy shrew): 126022334
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Entry
126022334 CDS
T09902
Symbol
DCP1B
Name
(RefSeq) mRNA-decapping enzyme 1B
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126022334 (DCP1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126022334 (DCP1B)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126022334 (DCP1B)
mRNA degradation factors
5'-3' decay
Decapping complex
126022334 (DCP1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
DUF3648
Motif
Other DBs
NCBI-GeneID:
126022334
NCBI-ProteinID:
XP_049639171
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All DBs
Position
11:complement(106930317..106988878)
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AA seq
601 aa
AA seq
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MAAVVQGRDISLAALRRHDPYIQRIVDVASQVALYTFGHRAHEWEKTDVEGTLFVYTRSA
SPKHGFTIMNRLSMENRTEPITKDLDFQLQDPFLLYRNARLSIHGIWFYDKEECQRIAEL
MKNLTQYEQLKACQSAPAGTSPVIISSGEGKEVDILRMLTKAKDEYTKCKTCSEPKQITS
SSAIYDNPNLIKPIPVKPRENQQHRIPQCSQTFASEPQHLSLTALFGKQDKAMCQETMEC
PQTHHHHHHHHPQEKLLVKQGVARALSYEEPGRQSPHIEKQLCPAIQKLMVRSADLHPLS
ELPGNRPYKNGSTHCTLESVSGSFQPEFPRPFGTSQLHGSSRTQNLMEKLCGTPGAPTRH
EPGTLAPSTFSRTLSTASHAAPEKAPKQPQLVCLDGALPPPLLEQPRVPGKAQLPLPRQT
LPISCPQISSSGVISPQELLRKLQMVQQEQQLHAPPRPALAAKFPVATHASRAGKPLDCW
IHQAAGPQKQTPLSQVISPQCIPAPAAAPLLMSPLVFTQTTSIPLKERHNGLLPLGSDET
VAAPTGLLLPLQSPVPSSSSLTKRQLQEALLYLIQNDDNFLNIIYEAYLFSMTQAAMKKT
T
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgtggtccaggggcgcgacatcagcctggcggccctgcggcgccacgacccc
tacatccagcgcatcgtggacgtggccagccaggtggccctgtacacgttcggccaccgg
gcccatgagtgggagaaaactgatgtcgaaggaactttatttgtttatacaaggtctgct
tctccaaagcatggattcaccattatgaataggctgagcatggaaaatagaacagagccc
attaccaaagatctggatttccagctccaggatcctttccttctctacaggaacgccaga
ttatccatccatggaatttggttttatgataaggaagaatgccaaagaattgcagagctt
atgaaaaacttgacccagtacgagcagttgaaagcctgccagagcgccccagcaggaacc
tccccggtgatcatcagctcgggagagggcaaggaagtggatatcttgcggatgctcacc
aaggccaaagatgagtacaccaagtgtaaaacctgttccgaaccaaaacagataaccagt
tcatctgccatttatgacaaccccaatctcatcaagccgattccagtcaagccccgtgaa
aaccagcagcatcgcatacctcagtgcagccagacctttgcctctgaaccccaacacttg
tccttgacagctctctttgggaagcaggacaaagctatgtgtcaggaaactatggagtgt
ccccagacgcaccaccaccatcaccaccaccacccccaagagaagcttctggtgaagcag
ggggtggcccgggccctgtcctacgaggagccaggaagacaatcaccccacatcgaaaag
cagctctgtccggccattcagaaactcatggtcaggagtgcagacctccacccgttgtct
gagctccccggaaaccggccctacaaaaatggcagcacccattgtactctggaatctgtc
tccggctcttttcagccagagtttccccggccctttgggacttcccagttgcatggctct
tccagaactcagaacctgatggagaagctgtgcggcaccccaggggcacccactaggcac
gagcctggcacactggcaccctccaccttcagcagaactctctccactgcctcgcatgcg
gctccagaaaaggccccgaagcagccacagctggtctgtctcgatggcgccctcccaccg
ccactgctcgagcagcctcgggtccctgggaaagcacagctcccgctcccgagacagact
ctccccatctcctgccctcagatcagcagctctggagtgatctctcctcaagagctgcta
agaaagctgcagatggtgcagcaggagcagcagcttcatgcgcctccccggccggccttg
gcggccaagtttcccgtggccacccacgcctcgagagcagggaaacccttggactgctgg
atccaccaggcagccggccctcaaaagcagacgcctctttctcaggtcatttcaccccag
tgcatccctgctccggcggcagctcctctgctcatgtcccccctggtgttcacacagacc
acctccatccccctgaaggagaggcacaatgggctcttgcccctggggagtgatgaaaca
gtggctgctcccaccggcctcctgctgcctctgcagagcccagtccccagcagcagctcc
cttaccaagcgccaacttcaggaagctctactgtacctcattcagaatgatgacaacttc
ttaaatataatctacgaagcttatctcttcagcatgacacaagctgccatgaagaagacc
acgtga
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