Suncus etruscus (white-toothed pygmy shrew): 126022361
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Entry
126022361 CDS
T09902
Symbol
ACAN
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
setr00535
]
126022361 (ACAN)
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126022361 (ACAN)
04091 Lectins [BR:
setr04091
]
126022361 (ACAN)
Proteoglycans [BR:
setr00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
126022361 (ACAN)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
126022361 (ACAN)
Lectins [BR:
setr04091
]
C-Type lectins
Lecticans
126022361 (ACAN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
EGF
V-set
Sushi
EGF_TEN
hEGF
EGF_3
UL45
EGF_CA
I-set
EGF_2
Motif
Other DBs
NCBI-GeneID:
126022361
NCBI-ProteinID:
XP_049639201
LinkDB
All DBs
Position
11:complement(8975791..9009018)
Genome browser
AA seq
1977 aa
AA seq
DB search
MTTLLLLLATLRVAATTETMQAPAPDNSLSVSIPEPSPLQAPLGSTITIPCYFIDPVLPV
TTAPATAPLSPRIKWSRVAKDSEVVLLVATEGQVRVSSAYQDRASLPNYPAIPSDVTLEL
QQLRTNDSGVYRCEVVHGIEDSRATLEVLVKGIVFHYRAISTRYTLDFDRAQRACLQNSA
IIASPEQLQAAYEDGFHQCDAGWLADQTVRYPIHTPREGCYGDKDEFPGVRTYGIRDTNE
TYDVYCFAEDMEGEVFYATSPDKFTFQEAASECQRLGARLATTGQLYLAWQAGMDQCSAG
WLADRSVRYPISKARPNCGGNTLGVRTVYLHDNQTGYPEPWSRYDAICYTGEDFVDIPEN
FFGAGGEDITIHTVTWPDLELPLAPRNITEGEARGNVILTAKPIFEAQSTMPGSEDAFTF
IPPDFHGSETETRETPAPWDHAEEPTPRPGSITSFTSQDLVVQVTAAPGAMEVPGQPRLT
TGVVFHYRPGSTRYSLTFEEAQQACLSTGAVMASPEQLQAAYEAGYEQCDAGWLQDQTVR
YPIVSPRTPCVGDKDSSPGVRTYGVRPTSETYDVYCYVDRLEGEVFFTTRPELFTFQEAL
DACAGHQATLATTGQLYAAWSRGLDKCHAGWLADGALRYPIVTPRPSCGGDRPGVRTVYL
HNNQTGLPDPLSRHHAFCFRGTTATASPGERRDTPPPPPAQEDLLMTQVAPGVAARPPGE
TVTITPEPDTPTEWESVYTPSSLSPQPGLAPMWPPTDMDTKESTEGPSVSPGPSEKPSTL
FPLGPSGTQQPGTEETSGDLVGSGDASGYLDSKGQPSGGSGLSSGDLSPTVPPAGGSGLP
EESGSASGDGDRIVGSSVPDTGMFPSGGKDREPPASGGREPSGLPSGELPEVSASGGQEF
SGLPSGEVPDVSASGGQEFSELPSGEVPDVSASGGQEFSGFPSGEVPEVSTSGGEELSRL
PSGEVPEVSASGGQEFSELPSGEIPDVSTSGGEELSGIPSKEFPEVSLSGGGELSGLPSG
DVPEVSASGGQDLSGIPSGEIPEVFLSGGGELSRLPSGEVPEVSASGGEELSRIPSKEFP
EVSLSGGGELSGLASGEVPEVSASGKESLEMSASGLEELSGLSSGKGDFGGLGRLPPGLR
GEYSGVEPGSGMSSGLPEISGLPSGIPTVSLVDSTLVEVFTATTAAELEGRGTLGVSGAG
HVSGFPWAEEQDVSGEGSGSSSGLVMMLGIPLETSGMPDLSGEASGISTGSTESSGITGL
SEGISGIPDISGDPGTPSGAASGSGDSLGITFVDTSLVEVTPTTFKEEEGLGSTELSGFP
SGETELASASGTMDGSGQAPGITVPWAPSSQPTELQGLPSSETEASGDISGAEMASGDLS
GLPKISLVNRTLVVSGTLAPTAQEAEGSSGTWELSGVSSGSWDVSGFQPSRAPPSSPPFS
GDFPSPTVDISGDSSAATSTSGDTEGLPDVTLITSEFLEGVTSPTLPQELGQRTPATHIP
PVLGSSGEGSGSGDTDKKTLESETESSVVLEFSKETLTYPSSQTGTSASPEASGEHSGSL
DLGEAPSSFPEAYPGVSGEDLAASEVSGETVLPTEASPKGPETSGWSLEPPTASGDRTEG
SSSGLDIVISTQASESEWVPPSQPPAEALEEIETSGTEHSGEETQAAAAPSPASPEDTDD
DDEAETTSADPPRSCAEVHCGAGTCQETEGRVVCLCPEGHTGEHCDGDIDECFSNPCRNG
ATCVDAPAAFTCLCLPSYRGDRCETDQDLCDEGWTKFQGHCYRHVPERATWADAEGHCRA
LDAHLSSIVTPEEQEFVNSNAQDYQWIGLNDRTIEGDFRWSDGHSLQFENWRPNQPDNFF
ATGEDCVVMIWHEKGEWNDVPCNYHLPFTCKKGTVACGQPPAVEHARPLGRPKARYEINT
VERYQCAPGFVQRHVPTIRCQPSGQWEQPRITCTDPAPYKQRRQERSPRRTLPGQAH
NT seq
5934 nt
NT seq
+upstream
nt +downstream
nt
atgaccactttacttctgctcttggccaccctgagggtcgctgccaccaccgagaccatg
caagcaccagcccctgacaactccctgagcgtcagcatccccgagccgtcccctctgcag
gctccgctgggcagtaccatcaccatcccctgttacttcattgaccctgtgcttcccgtc
actactgcacctgccactgccccactcagcccaaggatcaagtggagccgcgtagccaag
gacagcgaggtggtgctgctcgtggccacagaggggcaggtgcgggtcagcagcgcctac
caggaccgggcgtccctccccaactatccggccatccccagcgacgtcactttggagctg
cagcagctccgcaccaatgactcgggtgtctaccgctgcgaggtggtccacggcattgag
gacagtcgggctacgctggaagtgctggtgaaaggcatcgtgttccactatagagccatc
tccacccgatacactcttgacttcgaccgtgcgcagcgagcctgcttgcagaacagtgcc
atcattgccagccctgagcagctgcaggctgcgtacgaggacggattccaccagtgcgat
gctggctggctggctgaccagacagtacggtaccccatccacaccccacgggaaggctgc
tatggagacaaggacgagttcccgggcgtgagaacctacgggatccgcgacaccaacgag
acctatgatgtctactgctttgccgaggacatggagggcgaggtcttctatgccacatcc
ccggacaagttcactttccaggaggctgcctctgagtgccagaggctgggtgcccggctg
gccaccacgggccagctctacctggcctggcaggcgggcatggaccagtgcagtgctggc
tggctagccgaccgcagcgtgcgctacccgatttccaaggcgaggcccaactgcggcggg
aacacgctgggcgtgaggacagtgtacttgcacgacaatcagaccggctaccccgagccc
tggtcccgctatgacgccatctgctacacaggagaagacttcgtggacatcccagaaaat
ttctttggggcaggcggtgaggacattaccatccacacagtcacctggcccgatctggag
ctgccactggccccacggaacatcaccgagggtgaggctcggggcaacgtgatcctcaca
gccaagcccatcttcgaagcccagtctacgatgcccgggtcagaagatgccttcaccttt
atcccacccgactttcacgggagcgagacggaaaccagggagacccctgcgccctgggac
catgccgaggagcccacgcctcgtcctggctccatcacctccttcaccagccaggacctg
gtggtgcaggtgaccgcagcaccgggagccatggaagtaccagggcagccgcgactgacc
acaggggtcgtgtttcactaccgcccgggctccacccgctactcgctgaccttcgaggag
gcgcagcaggcctgcctgagcaccggggctgtcatggcctctccggagcagctgcaggca
gcctacgaggctggctacgaacagtgtgacgcgggctggctgcaggatcagactgtcagg
taccccattgtgagtccccggaccccctgtgtcggggacaaggacagcagcccaggggtg
cggacctatggcgtgcgccccacgtccgagacgtacgacgtttactgctacgtggaccgg
ctggagggggaagttttcttcaccactcgcccggagctgttcaccttccaggaggcgctg
gacgcgtgtgcgggccaccaggccacactggccaccacgggccagctgtacgccgcctgg
agccgtggcctggacaagtgccatgcgggctggctggcagacggcgccctgcgctacccc
atcgtgaccccgcggccgtcctgtggtggggacaggccgggtgtacgcactgtgtaccta
cacaacaaccagacgggcctccctgacccactctcccggcaccacgccttctgcttccga
ggtacgacggcaacggccagcccaggagaaagaagggacacccctccgccacccccggcc
caggaggacctgctgatgactcaagtggcccctggcgtggccgcacgccccccgggggag
acagtgaccatcaccccagagcccgacaccccgacggagtgggagtctgtctacaccccc
tccagtctgtccccacagccagggctcgctcccatgtggcctcccacagacatggacaca
aaggagagcactgaaggcccgtctgtgtcccccggaccctctgagaagccgtcgactcta
ttccctctggggcccagtgggacccagcagccaggcactgaggaaacatctggggacctc
gtaggcagtggagatgcttccggctacctggactccaaggggcagccctcaggagggagt
ggactgtcttcaggagacctgagtcccaccgtcccccctgctgggggttcaggcctgccc
gaggaaagtgggtcagcctctggggatggagacagaattgtggggtccagtgttcctgac
actggaatgtttccctcagggggcaaggatagagagcctcctgcctctgggggaagggag
cccagtggacttccttctggagaacttccagaagtttctgcctctggaggacaggaattc
agcggacttccttctggagaagttccagatgtttctgcctctggaggacaagaattcagt
gaacttccttctggagaagttccagatgtttctgcctctggaggacaggagttcagtggt
tttccttctggagaagttccagaagtttccacctctgggggagaagagctcagcagactt
ccttctggagaagttccagaagtttccgcctctggaggacaggagtttagcgaacttcct
tctggagaaattccagatgtttctacctctgggggagaggaactcagtggaattccttct
aaagaatttccagaagtttctctctctggaggaggggagctcagcggacttccttctgga
gacgttccagaagtctctgcctctggaggacaggatctcagtggaattccttctggagaa
attccagaagtttttctctctggaggaggggaactcagcagactgccttctggagaagtt
ccagaagtgtccgcctctggaggagaggagctcagtagaattccttcgaaagaatttcca
gaagtttctctctctggaggaggagagctcagtggacttgcttctggagaagttccagaa
gtttctgcttctggaaaggagagcctggaaatgtctgcatctgggcttgaggaactcagc
gggctgtcctcagggaagggagactttgggggcttgggcaggctgcccccgggactcaga
ggtgagtattctggggtagagcctgggagcggcatgtcctccggcctgcctgagatcagc
ggccttccttcagggattcccacagtctccctggtggactccacactggttgaggtgttc
acagccaccacggcagctgagctggagggccgggggaccctgggggtcagtggtgccggt
cacgtctcggggttcccatgggcagaggagcaggatgttagtggggaggggagcggatcc
tcttctggtttggtgatgatgttggggattcctctggaaacatctggaatgcccgatctc
agcggagaagcttctggaatttctacaggcagcaccgaatcatctggcataactggcctg
agtgagggcatatcggggatccccgatatcagcggggatcctgggaccccttcgggagcg
gcgagtggcagtggagactccttgggcatcacctttgtggacacaagcttggtggaagtg
accccaaccacattcaaagaagaggaaggtttggggtccacggagctcagtggcttccca
tcgggggagacagagctggctagtgcttcgggcaccatggatggcagtggacaagctcct
ggcatcacagtgccctgggcaccgagttcgcagcccacagaactccaggggctgccgagt
agtgagacagaggccagtggagacatctctggggctgagatggccagtggggacctctca
gggctccccaagatctcccttgtgaacagaactttggtggtttctgggaccctggctcct
actgcccaggaagccgaagggtcttcgggcacctgggaactcagcggggtctcgtcgggg
tcctgggacgtaagtggattccagcccagcagggcacccccaagttccccacctttcagt
ggagacttccccagccccacagtagatatcagcggggacagttcggcggccaccagcacc
agtggggacactgaggggctcccggatgtgacgctcatcacctctgagttcctggaggga
gtcacaagccccacgctaccgcaggaactgggtcagagaacccctgcaacacacattccc
cctgtactggggtccagcggggaaggatcagggtctggggacacggacaagaaaactctg
gagtccgagacagaaagctcggtggtgctggaattcagcaaagagacactcacttaccct
tcctcccaaacggggacatcagccagccccgaggccagtggagaacactcggggtccctt
gatttgggcgaagccccctcttccttcccagaagcctacccgggggtatccggggaggac
ttggcggcctccgaggtgagtggagagacggtgctgcccacggaagcctcccccaagggt
cctgaaacatcgggctggagtctggagccccctacagcttctggagacaggacagagggt
tctagctcagggctggacatcgtcatctccacacaggcctctgagtctgagtgggtcccg
ccaagccagccccccgcagaggcactggaagaaattgagacatccggaacagagcattcg
ggagaagagacccaagcagcggccgcacctagcccggcttctccagaagacaccgatgac
gacgatgaggcagaaaccacctctgcagatccccccaggtcctgtgccgaggttcactgt
ggagctgggacctgccaggagacagagggacgcgtcgtgtgcctgtgccccgagggtcac
accggtgagcactgtgatggagacattgatgagtgcttctcaaatccttgccggaatgga
gccacctgcgtggacgcgcccgccgcttttacatgcttatgccttcccagctaccgaggg
gaccggtgcgagacggatcaggacctgtgtgatgagggctggaccaagttccaaggtcat
tgctaccgccatgtgcccgagcgtgccacatgggcagatgccgagggccactgccgtgcc
ctggacgcgcatttgagcagcatcgtcacccccgaggagcaggagttcgtcaacagcaac
gctcaggactaccagtggatcggcctgaatgatcggaccatcgaaggggatttccgctgg
tctgacgggcactccttgcaattcgagaactggcgccccaaccagcctgacaatttcttt
gccacgggcgaggactgcgtggttatgatctggcacgagaagggcgaatggaacgatgtg
ccgtgcaactaccacctgccattcacctgcaaaaagggcacagtggcctgcggacagccc
cccgcggtggagcacgcccggcctttgggacgccccaaagcacgctacgagatcaacaca
gtggagcggtaccagtgtgccccaggcttcgtacagcgtcatgtgcccaccatccgctgc
cagcccagcggccagtgggagcagccacggatcacctgcactgaccctgccccctacaag
cagagacgccaggaacgcagccctcggaggacactgccaggccaggcacactga
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