Suncus etruscus (white-toothed pygmy shrew): 126022392
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Entry
126022392 CDS
T09902
Symbol
EFL1
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor-like GTPase 1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
126022392 (EFL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
setr03009
]
126022392 (EFL1)
Ribosome biogenesis [BR:
setr03009
]
Eukaryotic type
Pre-60S particles
GTPases
126022392 (EFL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
Phlebo_G2_C
Tet_JBP
Motif
Other DBs
NCBI-GeneID:
126022392
NCBI-ProteinID:
XP_049639236
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All DBs
Position
11:10083098..10119961
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AA seq
1129 aa
AA seq
DB search
MVLAAVERVVRLQREPARIRNICVLAHVDHGKTTLVDCLISSNGIISSRLAGKLRYMDSR
EDEQVRGITMKSSAISLHYTDSREEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPLEAYSHLKNILEQINALTGTL
FTSKVLEERAERESESQVIANSEQGMQVYDWSTGLEDTDDSHLYFSPDQGNVVFASAIDG
WGFGIEHFANIYSKKIGIRKEVLLKTLWGDYYINMKAKKIMKVDQAKGKKPLFVQLILEN
LWSLYDAVLKKDVEKIDKIVTSLGLKMGAREARHSDPRVQINAICSQWLPVSRAVLAMVC
QKLPSPLEITAERVERLMCPGSQPFDTLPSETQALKAAFMKCGSEDTDPVIIFVSKMFAV
DAKALPQNKPRPLTQEELAQRRARARQRNAEKLAAVQGKATSEANLEGHTPETSPQGEEP
EVKEQQLESLTPKAVTQEENSQEEFFIAFARVFSGVARKGKKIFVLGPKYSPIEFLQRVR
PVWSPEGFSASFEDLPTVPHMSCCTLENLYLLMGRELEDLEEVPPGNVLGIGGLQDLVLK
SATLCSMPCCPPFIPLSFEAAPIVRVAVEPKHPSDMPHLVRGMKLLNQADPCVQILIQET
GEHVLVTAGEVHLQRCLDDLKERFAKIDISVSEPIIPFRETITKPPKVDMVNEEIGRQQK
VAVIHQTKEEQNKVPDGVQVDPDGLVTIATPNKLAVLSVRALPLPEEVTQILEESSDLIR
SMEQWTSSLNEGKNLPQMDQKTQEKMGEFKRKLEQHLTGRKWRNTVDQIWSFGPRKCGPN
ILVNRSMDFASSVWTGLSSVSSQETRSYRDLSNSVVSGFQLATLSGPMCEEPLMGVCFVL
EKWDLSKFKEQGASEAQRPECGPTEEGLQGGASTNYEPMNNCTSGAVEKRPAPRGESSLP
DCYGPFSGQLIATMKEACRYALQAKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVL
QEEMKEGTDMFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEVIPSDPFWVPTTE
EEYLHFGEKADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggctgccgtggagcgcgtggtgcggctgcagagggagccggcgcggatccgc
aacatctgcgtgttggcgcacgtggaccacggaaaaactactctggttgactgtctcata
tctagcaatgggatcatttccagccggttggcaggcaagttgcggtacatggacagcaga
gaagacgagcaggtccgaggcatcaccatgaaatccagcgccatctccctgcattacaca
gacagcagagaggaatacctcatcaatctgatagactccccggggcacgtcgatttctcc
tctgaggtttccaccgctgtgcgcatctgtgatggctgcattattgtggtggatgcagtg
gaaggagtatgcccacagacacaggcagttctgcggcaagcttggctcgaaaacatacgc
ccagtcctagtgattaataaaattgatcgcttgatagtagagctgaagttcaccccactt
gaggcctattctcacctcaagaatattttagaacagataaatgcactcacaggaactctt
tttacttctaaagtcctagaagagagagcagagagagagtctgaatcccaagtgatcgca
aactctgagcaaggcatgcaggtgtatgactggagcaccggcttggaagacacggatgac
tctcacctttacttttctcctgatcagggcaatgtggtgtttgcaagtgccattgatggc
tggggctttggaatcgagcactttgccaacatctacagtaagaaaatcggcatcagaaag
gaagttcttctgaaaaccttgtggggagattattatataaacatgaaggctaagaagatc
atgaaggtggaccaggcaaaaggaaagaaacctttgtttgtacagttgatcctggaaaat
ctatggagtttgtatgatgctgttttgaaaaaagacgtagagaagatcgacaagatcgtg
acctccttaggactgaaaatgggagctcgagaggcacgccactcagacccgagggtccag
atcaatgccatctgcagccagtggctgcctgtgtcccgagctgtgcttgctatggtgtgc
cagaagcttcccagtcccctggagatcacagccgagagagtggagagactgatgtgtccc
ggctcccagcccttcgacactttgccttccgagacccaggcactgaaagcagcttttatg
aaatgtggaagtgaagataccgatccggttattatcttcgtttccaagatgtttgcggtg
gatgctaaagcacttcctcagaacaagcccaggcccctcacgcaagaagaacttgcacag
cggcgggcccgtgcccggcagcggaacgcagaaaagctggcagctgtgcagggtaaggcc
acctcagaagccaacctggaggggcacaccccggaaaccagtcctcagggagaagagcca
gaagttaaagagcagcagttagagagtctcacccccaaagctgtgacccaggaagaaaac
agccaagaagagttcttcattgcctttgctcgtgtcttcagtggtgtggctcgaaaagga
aagaaaatatttgtcttgggaccaaaatacagtcctattgagtttctacagagggtaaga
cctgtatggtccccggaaggcttctcagcttcgttcgaggacctgcccactgtgccccac
atgtcctgctgcactctggagaacctgtatctactgatgggccgtgagctagaggacctg
gaagaggtgcctccggggaatgtacttggaataggaggcctccaggatttggtgctaaag
tcggcaactctctgcagcatgccctgctgtcccccattcatcccgctcagctttgaggcg
gcccccatcgtcagggttgctgtggagcccaagcacccaagtgatatgcctcatcttgtc
agaggcatgaagctgctgaaccaggcggacccctgcgtccagattctcatccaggagaca
ggcgagcatgtcctagtcacagcaggcgaggtgcacctccaacgatgcttggatgaccta
aaagaaaggtttgccaagattgatatcagtgtatctgaacccatcatcccattcagagaa
acaattacaaagccccccaaagtggacatggtcaatgaagaaataggccggcagcagaaa
gttgcagtcatccaccaaacaaaggaagaacagaacaaagtccccgatggcgtccaggtc
gaccctgatggcctcgtcaccatcgccactcccaacaaacttgccgtgctcagcgtccga
gccctgccccttccagaagaagtcacccagattctagaagaaagcagtgacctgatccgt
tccatggagcagtggacgtcctcgttgaatgagggcaaaaatttgccacagatggaccag
aagacccaagagaaaatgggggaattcaaaagaaaactggagcagcaccttacggggaga
aagtggaggaacactgttgaccagatctggtctttcggcccaaggaaatgtggacccaac
atcctggtgaacaggagcatggacttcgccagctccgtgtggactggcctgtcaagtgta
tcttcccaggaaacccggagctaccgggaccttagcaacagtgttgtgagtggcttccaa
ctggccactctctcaggccccatgtgcgaggagccactcatgggtgtctgttttgttcta
gaaaaatgggatctgagtaagttcaaggagcagggagccagtgaggcacagagaccagaa
tgtggtcccacggaagaaggactacagggaggtgccagcacgaactatgagccgatgaac
aactgcacttcaggagcggttgaaaagaggccagccccaaggggagaatcctccctccca
gactgttatgggcccttctcagggcagcttattgccaccatgaaggaggcctgtcgctat
gcccttcaggcaaaaccacagcgtctcatggcagccatgtacacctgtgacatcatggct
acgggcgacgtgctgggccgggtgtatgccgtgctgtccaagagagagggccgcgtgctg
caggaggagatgaaggagggcacggacatgttcatcatcaaggccgttctgcctgttgcc
gagagcttcggctttgccgatgagatccgtaagaggaccagcgggttagctagcccgcag
ctggtgtttagccactgggaggtcatcccgagtgaccccttctgggtgccgacaactgaa
gaggagtatttgcacttcggggagaaggcagattcagagaaccaggcccggaagtacatg
aacgccgttcggaagcggaaggggctgtatgtggaagagaagatcgtggagcatgcagag
aagcagaggaccctcagcaagaacaagtag
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