Suncus etruscus (white-toothed pygmy shrew): 126022398
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Entry
126022398 CDS
T09902
Symbol
CHD2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126022398 (CHD2)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126022398 (CHD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
CHDCT2
Motif
Other DBs
NCBI-GeneID:
126022398
NCBI-ProteinID:
XP_049639240
LinkDB
All DBs
Position
11:complement(7349044..7425302)
Genome browser
AA seq
1831 aa
AA seq
DB search
MMMRNKDKSQEEDSSLHSNASSHSASEEASGSDSGSPSESEAGSDAASGHCSDSNSSSES
SESPSESESESAGSKSQPALPEAKEKPTSKKERIADVKKMWEEYPDVYGVRRSNRSRQEP
SRFNIKEEASSGSDSGSPKGRGQRQLKKQEKWKQEPSEDEQDAGSSAESEPEQKKVKARR
PVPRRPVPKSRVKKPAKTQRGKKKKPESSDEDDEDDETPKRQTRRRAAKNVSYKEDDDFE
TDSDDLIEMTGEGVDEHQDNSETIEKVLDARIGRKGATGASTTVYAMEARGEPSTDCDTV
VEEGEMQFLVKWKGWSYIHSTWESEETLQQQKVKGLKKLENFKKKEDEIKQWLGKVSPED
VEYFNCQQELASELNKQYQIVERVIAMKTGKSTLGQTDFPAHSRKPSPSNEPEYLCKWMG
LPYSECSWEDQALIGRKFRSCIDGFHSRNNSKTIPTRECKALKQRPRFVALKKQPAYLGG
ESLELRDYQLEGLNWLAHSWCKSNSVILADEMGLGKTIQTISFLSYLFHQHQLYGPFLVV
VPLSTLTSWQREFEIWAPEINVVVYIGDLMSRNTIREYEWIHAQTKRLKFNVLITTYEIL
LKDKTVLGSINWAFLGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSL
LHFIMPEKFEFWEDFEEDHGKGRENGYQSLHKVLEPFLLRRVKKDVEKSLPAKVEQILRV
EMSALQKQYYKWILTRNYKALAKGTRGSTSGFLNIVMELKKCCNHCYLIRAPEDSDRESG
PEALSSLIRSSGKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDG
SIKGEIRKQALDHFNADGSEDFCFLLSTRAGGLGINLASADTVIIFDSDWNPQNDLQAQA
RAHRIGQKKQVNIYRLVTKGTVEEEIIERAKKKMVLDHLVIQRMDTTGRTVLENNSGRSN
SNPFNKEELTAILKFGAEDLFKELEGEESEPQEMDIDEILRLAETRENEVSTSATDELLS
QFKVANFATMEDEEELEERPHKDWDEIIPEEQRKKVEEEERQKELEEIYMLPRIRSSTKK
AQTNDSDSDTESKRQAQRSSASESETDDSDDDKKPKRRGRPRSVRKDLVEGFTDAEIRRF
IKAYKKFGLPLERLECIARDAELVDKSVADLKRLGELVHNSCVAAMQEYEEQLKENTSEG
KGPGKKRGPTIKISGVQVNVKSILQHEEEFEMLHKSIPTDPEEKKRYCLSCRVKAAHFDV
DWGVEDDSRLLLGIYEHGYGNWELIKSDPELRLTDKILPEESDKKPQGKQLQTRADYLLK
LLRKGLEKQGAPGGDEVQLKKRKPRVKKENKAPRPKEEGGEQPSPRHSDNPSEEGEVKDD
GLEKSPIKKKQKKKENKENKEKQLSSRKNKEGEKERKKAREKKEKPKGGDAKPASRSSRA
QGPVHITAGSEPVPIGEDEDDDLDQETFSICKERMRPVKKALKQLDKPDRGLSVQEQLEH
TRSCLLKIGDRIAECLKAYSDPEHVKLWRRNLWIFVSKFTEFDARKLHKLYKMAHKKRSQ
EEEEQKKKDDLLGGKKPFRPEASGSSRDSLMSQPHTPHNLHPQKPHLPPAHGPQPHGHPR
DNYNHPNKRHFSNSDRGDWQRERKFGYGGGGGGGGGGNPPWGSERYHQYEQHWYKERHYG
DHRHPDSHRSGYRPSSLSRKRPYEQYSSDRDHRGHRDYYDRHHHDSKRRRSDEFRPQNYH
QQDFRRLSDHRAPMGYHGQGPSDHYRSFHTDKLGGYKQPLPPLHPAVSDPRSPPSQKSPH
ESKSPLDHRPPLERSLEQKNNPDYNWNARKT
NT seq
5496 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgagaaataaggacaaaagccaagaggaagacagttcgctccacagcaatgct
tcgagccactcggcctcagaggaggcatcgggctcagattcggggagcccctcggagagc
gaggcgggcagcgatgcagccagtggccactgcagcgactccaacagcagctccgagtct
tccgagagtccgtcggaatctgagagtgagtctgcgggctccaagtcgcagccggctctc
cccgaagccaaagagaagcccacctcgaagaaggagcggatcgccgatgtgaagaagatg
tgggaagagtatcctgacgtgtacggggtccggcggtccaaccgaagccgacaagagccg
tcacgatttaacattaaggaggaggcgagtagcgggtccgacagtgggagtcccaaagga
agaggccagaggcagctgaaaaaacaagagaagtggaagcaggagccgtcagaagacgag
caggacgcaggttccagcgctgagagtgagcccgagcagaagaaagtgaaggcccgtagg
cctgtcccccgaagaccagtgcccaagtcccgtgtgaaaaagccagcaaagacccagcgt
gggaagaaaaaaaaaccagagtcttccgacgaggatgatgaagatgacgagactcccaag
aggcagactcgccggagggccgcgaaaaatgtcagttacaaggaagacgatgactttgag
accgactcggacgacctcattgaaatgactggggaaggtgttgatgaacaccaggataat
agtgaaaccatcgagaaggtcctggatgccaggatcggaaggaaaggagccaccggcgcc
tcgaccactgtgtacgcgatggaagcccgaggcgagcctagcactgactgcgacacggtc
gtggaggagggcgaaatgcagttcctcgtcaagtggaagggttggtcttatatccatagc
acgtgggagagtgaagaaaccttacagcagcagaaagtgaagggccttaaaaaactagag
aacttcaagaagaaagaggatgaaatcaagcaatggttagggaaagtgtctcctgaagat
gtggaatatttcaattgccaacaagagctggcttccgagttgaacaagcagtatcagata
gtagagagagtcatagctatgaagacgggtaaatccactctgggacagacggattttcca
gctcacagccggaagccatcgccgtccaacgagcccgagtacctctgcaagtggatggga
ctcccttactccgagtgcagctgggaggaccaggctctgatcgggcgtaaattccggagc
tgcatcgacgggttccacagccgcaacaactccaagaccatccctacccgtgagtgtaag
gccctgaagcagagaccccggtttgtggccctgaagaagcagccggcgtatctgggtggt
gagagcctggagctccgggactaccagctcgaaggcctcaactggctggcgcattcctgg
tgcaaaagcaacagcgtgatcctggctgatgaaatggggctgggcaagaccatccagacc
atctccttcctgtcctacctgttccaccagcaccagctctatggccccttccttgtagtc
gtgcccctgtccaccctcacctcctggcagagggagtttgagatctgggccccggagatc
aatgtcgtggtttacataggcgacctgatgagcagaaatacgatacgagaatatgagtgg
attcacgctcagaccaagagacttaagttcaacgtcctcatcaccacctacgagatcctc
ttgaaagataagactgtgctgggcagtattaactgggccttcctgggagtggacgaagca
caccggctgaagaatgatgattctctgttgtataagacgctgatcgactttaagtccaac
cacaggcttctgatcacggggaccccccttcagaactccctcaaggaactctggtcactg
ctgcactttattatgcccgaaaagttcgagttttgggaggacttcgaagaagaccatggg
aaagggcgagagaatggttatcagagtctccacaaggtgcttgaacccttcctcctgcgg
cgagtgaagaaggacgtggagaaatccctgcccgccaaggtggagcagatcctgcgggtg
gagatgtcagctctgcagaagcaatattacaagtggatcctgaccagaaactacaaggcc
cttgccaaggggacgcgcggcagcacctctgggttcctgaacattgtgatggagctgaag
aaatgctgtaatcactgctacctgatccgagcccctgaagacagtgaccgtgagagtggg
cccgaggcgctctcgtccctcatcaggagcagcgggaagctgattctcttggacaagctg
ctgaccaggctccgagaaaggggcaaccgcgtcctcatcttctcccagatggtgcggatg
ctagacatcctggccgagtacctgaccatcaagcactaccccttccagcgcctggacggt
tctatcaagggtgagatccggaaacaggctttggatcacttcaatgctgacggctcagag
gatttctgcttcctgctctccacaagggctggcggtctgggcatcaacctggcttcggca
gacacggtgatcatcttcgactcagactggaacccccaaaatgacctgcaggcacaagcc
cgtgcccacagaatcggccagaagaagcaggtgaatatctaccgcctggtcaccaagggc
actgtggaggaggagatcatcgagcgggccaagaagaagatggtgctggaccacctggtc
atccagcgcatggacaccacaggccggacagttctggaaaacaactcggggagatccaac
tcaaacccgttcaataaagaagagctgacggcgattctgaaattcggagcggaggatctc
ttcaaagaactggagggcgaggagtcggagccgcaggaaatggacattgatgagattctg
cgcttggccgagaccagagagaacgaggtttcaaccagtgctacagatgagcttttgtcg
cagttcaaggtggccaacttcgccacgatggaggacgaggaggagctggaggagcgccct
cacaaggactgggacgagatcatccccgaggagcagcggaagaaggtggaggaggaggag
cggcagaaggagctggaggagatctacatgctgccgcgcatccgcagctccaccaaaaag
gctcagaccaacgacagcgactcagacacagagtctaagaggcaggcacagaggtcatca
gcctcagagagcgagaccgacgactcggatgacgacaagaagcccaagcgcaggggccgc
cctcgcagcgtgcgcaaggacctggtggagggattcacggatgccgagatccgaaggttc
atcaaggcgtataagaagttcggtctccccctggaacggctggagtgcatcgcccgcgac
gctgagctggtggacaagtccgtggccgaccttaagcggcttggggagctggtgcacaat
agttgcgtggcagccatgcaggagtacgaagagcagctgaaggagaacacgagcgagggg
aaagggccaggcaagaagagaggccccacgatcaagatctcaggggtgcaggttaatgtg
aagtccatcctacagcacgaggaggagttcgagatgctgcacaagtcaatccccacagac
cctgaagagaagaagaggtactgcctgagctgccgggtcaaggctgcgcatttcgatgtg
gactggggcgtggaagacgactcgcgcctgctgttggggatctatgagcatggctacggc
aactgggaactcatcaagagtgaccccgagctcaggctcactgacaagatcctgcccgaa
gagtcagacaagaagccgcagggcaagcagctgcagacgcgtgccgactacctgctaaag
ttgctgcgcaagggtctggagaagcaaggggcgcccggtggggatgaggtgcagctcaag
aagaggaagcctcgggtgaagaaagaaaacaaggcaccccggccgaaggaggaggggggc
gaacagccctcccccagacactcggacaacccttcggaagagggcgaggtcaaggatgac
ggcctagagaagagccccatcaagaagaagcaaaagaagaaagagaacaaggaaaacaag
gagaagcagctgagttcgagaaagaacaaggaaggggaaaaggagaggaagaaggcgaga
gagaagaaagagaagcccaaaggtggagatgccaaacccgccagcaggtctagccgcgcc
caggggcctgtccacatcaccgcgggcagcgagcctgtccccattggggaagatgaggat
gacgacctggaccaggaaaccttcagcatttgcaaggagcggatgcggccggtgaagaag
gccctgaagcagctggacaagcccgaccgtggcctgagcgtgcaagagcagctggagcac
acccgcagctgcttgctcaagatcggggaccgcatcgctgagtgcctcaaggcctactcg
gacccggagcatgtgaagctgtggcggaggaacctgtggatttttgtctccaagttcacg
gagtttgatgctcggaaactgcacaagttgtacaagatggcgcataagaaaagatcccag
gaggaggaggagcagaagaagaaagacgacctgcttggaggcaagaaaccatttcggcct
gaagcgtctggctccagccgggactcgctgatgtctcagccccacaccccacacaacttg
cacccccagaagccccacctgccccctgcccatggcccgcagccgcacggacaccctcgt
gataactacaaccaccccaacaaacggcacttcagcaactcagatcggggtgactggcaa
cgtgagcggaagtttggctatggtggtggtggtggcggtggcggcggcgggaacccccca
tggggcagtgagcggtaccaccagtatgagcagcactggtacaaggagcgacactatgga
gatcaccggcaccccgactcccaccgctctggctaccggcccagcagcctgtcccgcaag
aggccctacgagcagtacagtagtgaccgcgaccaccggggacaccgggactactatgac
aggcaccatcatgactccaagcggagaagatcagacgagttccggccccagaattaccac
cagcaggatttccggcgcttgtctgaccaccgggctcctatgggctaccacggccagggc
ccctcggaccattaccgttccttccacacagacaaactggggggctacaagcagcccttg
cccccgctccaccccgccgtgtctgacccccgctccccgccctcgcagaagtcaccccac
gaatctaagtcccccctggaccacaggcctcccctggagcggtccctggagcagaagaac
aacccggattataactggaacgcccggaaaacttaa
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integrated database retrieval system
