Suncus etruscus (white-toothed pygmy shrew): 126022488
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Entry
126022488 CDS
T09902
Symbol
AAAS
Name
(RefSeq) aladin
KO
K14320
aladin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126022488 (AAAS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126022488 (AAAS)
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126022488 (AAAS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_WDHD1_1st
ANAPC4_WD40
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR19_1st
PD40
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
126022488
NCBI-ProteinID:
XP_049639360
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All DBs
Position
11:complement(79778234..79793132)
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AA seq
541 aa
AA seq
DB search
MCSLGLFPPPPPRGQVTLYEHNNELVTGTSYESPPPDFRGQWINLPVLNLTKDPLKAPGR
LDHGTRTAFIHHREQVWKRCINIWCELGVFGVLNEIANSEEEVFKWVKMASSWAVSLCRW
ASSLHGSLFPHLSLRSEDLIAEFSQVTNWTSCSLRAFAWHPHTNKFAVALLDDSVRVYNA
NSTIVPFLKHRLQRNVAALAWKPLSASVLAVACQSCILIWTLDPTSLSTRPSSGCAQVLS
HFGHAPVTSLAWAPSGGWLLSASPVDAGILVWNVSTETCVPLPWFRGGGVTNLLWSPDGS
KVLATTPSSVFRVWEAQMWTCERWPTLAGRCQTGCWSPDGNRLLFTVLGEPLIYSLSFPE
FGEGKGRVGGAKSATIVADLSEMTIQTPNGEERIGGQAHSMVWDPSGERLAVLMKGNPRV
QEGTPVILLFRTRNSPVFELLPCGMIQGEPGAKAQLITFHPSFSKGALLTVGWSTGRIAH
IPLYFVNAQFPRFNPVLGRAQEPPAGGGGSVHDLPLFTETSPLDAPWDPHPSPDQGHSIS
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtgctccttggggttattccccccgccgccgccgaggggtcaagtcaccctctacgag
cacaataacgagctggtgacaggcactagctatgagagtcctccgcccgacttcaggggc
cagtggatcaatcttcctgtcctaaacctgaccaaagatcccctgaaggcccctgggaga
ctggaccatggcacgagaactgctttcatccatcatcgcgaacaagtgtggaaaagatgc
atcaacatttggtgtgagctgggtgtttttggggtgctgaatgaaattgcaaactcagag
gaggaggtgtttaagtgggtgaagatggcatccagctgggccgtgtcactctgtcgatgg
gcctcctccctccatggttccttgttcccccatctctctctcaggagtgaagatctcatt
gctgaattttcccaggtcacaaactggaccagctgctccttgcgggcctttgcgtggcac
ccccacaccaacaagtttgcagtggctctgctagatgactcagttcgtgtgtataatgcc
aacagcactatcgtcccttttctgaagcaccggttacagagaaatgtggctgctctggcc
tggaagcccctcagtgcctctgtattggctgtggcctgccagagctgcattctcatctgg
accctcgaccctacctcactgtcaacccggccttcttccggctgtgcccaggttctctct
cactttggtcatgcacctgttactagcctagcctgggcccccagtgggggatggctgctc
tcagcctcccctgtggatgctggtatcctggtatggaatgtatcaacagagacttgtgtt
ccccttccctggtttcggggaggaggggttaccaacctgctctggtccccagatggcagc
aaagtcctggctaccacaccttcttcggtcttccgagtctgggaggcccagatgtggaca
tgtgagcggtggcctactctcgcagggcgctgtcagactggctgctggagcccagatgga
aaccgtctactgttcactgtcttaggggaaccactgatttactccttgtctttcccagaa
tttggggaaggaaaggggcgtgttggaggcgccaaatcagcaacaattgtggcagatctg
tcagagatgacaattcagacaccaaatggagaggagaggattggaggacaggcccactcc
atggtctgggacccaagtggggagcgtctggctgtgctcatgaaaggaaacccacgggtc
caggagggtacgccagttatccttctctttcgcactcgaaacagccctgtgtttgagctg
ctgccttgtggcatgatccaaggggagccaggagccaaggcccagctcatcacgttccac
ccttccttcagcaaaggagctttgctcactgtgggctggtctacaggacggatagcccac
atcccactctactttgtcaatgctcagttcccacgttttaacccagttctaggccgagcc
caagagccccccgctggaggaggcggctcagtccatgatctgcccctttttacagagaca
tcccccttggatgccccttgggaccctcacccaagtcctgatcagggccactctatttcc
cactag
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