Suncus etruscus (white-toothed pygmy shrew): 126022764
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Entry
126022764 CDS
T09902
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03082
ATP-dependent chromatin remodeling
setr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126022764 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126022764 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126022764 (ARID2)
03021 Transcription machinery [BR:
setr03021
]
126022764 (ARID2)
03036 Chromosome and associated proteins [BR:
setr03036
]
126022764 (ARID2)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
ARID
126022764 (ARID2)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126022764 (ARID2)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
126022764 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
126022764
NCBI-ProteinID:
XP_049639716
LinkDB
All DBs
Position
11:16088716..16225110
Genome browser
AA seq
1834 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGRELDLHSLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDSEVRDLISDRNKSQEGSSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKKVEDSSNNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTSVVRVDAVPDISSSPSPAGIPHGAQTVGNHFQRTPVTNQSS
AMTATQMSFPIQGVHTVAQTVSRIPPNPSLHTHQQQNAPMTVIQNKTPIPCEVVKATVIQ
NSVPQTAVPVSIASQTSLVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVPGQIPS
GTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSTGSQPQDT
VIIAPPQYVTTSASNIVSATSVQNFQVAAGQMVTIAGVPSPQPSRVGFQNIAPKPLPSQQ
VSSTVVQQPIPQPQQPTQQSVVIVSQPAQQGQTYTPAIHQIVLANPAALPTGQTVQLTGQ
PSITPSSSPSPVPATNNQLPTAMPSSSTSQSQGPPPTVSQMLSVKRQQQQQQQQQHSPAS
QPQQVQVQVQQPQVQMQQVQPQQTNTGVAQPASGESSLIKQLLLPKRGPSTPGGKLILPA
PQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQTPAQQLLVGQQNVQLVQSAMPSTGGVQ
TVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNTTQLIAPAGI
NMSGTQAGVGLQVQTLPAPQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHER
KIEVMENPSCRRGAMSTSNGDTKENEIQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCSL
FSNGPLLELGENGASGKQNSEQVDMQDIKNDLKKPLVNGICDFDKGDGSHLSKNIPNHKT
SNHVGNGEISPVEPQGTLDATQQDTAKGDQLERISNGPVLTLGGSSSVSSLQEASSTVPQ
QLSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTSSVIQGHQIIAVPPRSGSRVSHSPAL
SSDRSTNGTAECKSIKRPAEDNDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPTYIQNVLPQNTPMTPSPAVQVQNQPNSSQPPFSPSSQH
ADPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRFS
FITHLQDKHCSKDALLAGLKQDEPGQAGNQKSSTKQPAVGGTSSTPRAQKAIVNHPSAAL
MALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVLA
ISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactggctttcctg
gacgagctgcggcagttccaccacagccgagggtcgccttttaaaaaaatccccgcggtg
ggtggccgagagctggatctccacagtctctacaccagagtgactactttaggcggcttc
gcgaaggtttcagagaagaatcagtggggagaaattgtagaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gaaaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggttatctatggatttcaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggattttgcaattaatgtatgc
actctcctgtcaaatgaaagcaaacacgtcatgcaacttgaaaaagatcctaaaatcatc
actttattacttgctaatgctggggtatttgatgacaccttaggatcattttctactgta
tttggagaagaatggaaggagaagaccgatagagattttgttaagttttggaaagacatt
gttgatgacagtgaagtacgtgaccttatttctgatagaaacaagtctcaagaaggttca
tcaggagagtggatttgggagtcattatttcatccaccccgaaaactgggcattaatgat
attgaaggacaacgggtacttcagatcgcagtgattttgcgaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgcacttgtcttcgtttccttttactttctgcg
catagtcattttatttctctgaggcaattaggccttgacacattaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaaccactcatctgatgtttcatactgttaca
aaatgtttaatgtccagggatagatttttaaagatgagaggaatggaaattttgggaaat
ctttgcaaagctgaagataatggtgttttgatttgtgaatatgttgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacacttgag
gtgctatatatgctaacagaaatgggagatgtggcttgcacaaaaattgcaaaagtagaa
aagagtatagacatgttagtgtgtctcgtttctatggatattcagatgtttggtcctgat
gctctagctgcagtaaaactcgttgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctatagaacaagtccaaacccagacccatgtagcatcagccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcatttcgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctctcaacctgcagtaaattagctcgtggtgga
attttaacatcaactggattttataaatgtcttagaacagtctttcccaatcatacagtg
aagaaagtggaggattctagtaataacgggcaggcgcatattcatgtagtaggagtaaaa
cggagggccataccacttcctattcagatgtattatcagcaacaaccagtttctacttct
gtcgttcgtgttgatgctgttcctgatatttcttcgagtccttcacctgcaggtattcct
catggagcacaaactgtaggaaaccattttcagagaactcctgttaccaaccagtcttca
gctatgactgcaacacagatgtcttttccaatacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatccttcacttcatacccaccagcagcaaaatgctccaatg
actgtcatccagaacaaaactccaattccttgtgaagttgttaaagctacagtaatccag
aattctgtaccccagactgcagttcctgttagtattgcctcacagacttctcttgttcag
aatcatagtacagggccacaacctgttacggttgtaaattcccagacattgcttcaccat
ccatctgtaattccacagcagtcaccattacatacagtggtaccaggacagataccttct
ggcactcctgttacagtgattcaacaagctgtcccacagagtcatatatttggcagagta
cagaacatacctgcatgtacttcgacagtttcacagggtcagcagttaatcaccacatca
ccgcaacctgtgcaaacttcatctcaacaaacatcaactgggagccagccccaagacact
gttatcatagcacctccacagtatgttacaacttctgcatccaatattgtctcagcaact
tcagtacagaactttcaggtagctgcaggacaaatggttaccattgctggtgtcccaagt
ccacaaccttcaagggttgggtttcagaacattgcacccaaacctctcccttctcaacaa
gtttcatcaacagtggtacaacagcctatcccacaaccacaacagccaactcaacagagt
gtagtaattgtaagccaaccagcccaacaaggtcaaacttacacaccagccattcaccaa
attgttcttgctaatccagcagctcttccaactggtcagacagttcagctaactggacaa
ccaagcataactccatcgtcctcaccgtcacctgtcccagctacaaataaccaactccct
actgccatgccatcatcttccacctcccagtcacaaggaccacctcctactgtcagtcaa
atgctctctgtgaaaaggcaacagcagcagcaacagcagcagcagcattcaccagcatcc
caaccgcaacaggtacaggtacaagttcagcagccacaagtacagatgcaacaagtacaa
ccacagcaaacaaatacaggagttgctcagccggcttctggtgagtcaagtctaataaaa
cagttgcttcttccaaagcgtggcccttcaactccgggtggtaagcttattctcccagct
ccacaaattcctccacctaacaatgcaagagctcctagccctcaagtggtctaccaggtg
gctaataaccaagcagcaggttttggagttcaggggcaaactccagctcagcagctattg
gttgggcaacaaaatgttcagttggtccaaagtgcaatgccatccacagggggagtacaa
actgtgcccatctcgaacttacaaatattgccaggcccactgatctcaaatagcccagca
accatattccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacaagt
tttgcaactgcaactgtgagtcagggaaatacaactcagctcattgctccagcaggaatt
aacatgagtggaacacaggcaggagttgggcttcaggtgcaaacacttccggcccctcaa
gcatctccagctggacaatcatcttgtactactgctactcccccattcaaaggtgataaa
ataatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgtgcatgaacgt
aaaattgaagtcatggagaacccgtcatgccgacgaggagccatgagcaccagcaatggg
gatacaaaggaaaatgaaatacaggtgggaagtcttttaaatgggagaaaatacagtgac
tcaagtctacctccttcaaactcagggaaaattcaaagtgaggcgaatcagtgctcactg
ttcagtaatgggccattgttagagttaggtgagaatggagcatctggaaaacagaattca
gagcaagtggacatgcaggatatcaaaaatgatttgaaaaaacctctagtcaacggaata
tgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcacaaaacc
tccaatcatgttggcaatggcgagatatctcccgtggaaccacaagggacattagatgca
actcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgtatta
actttgggtggctcctcatctgtgagcagtttacaggaagcttcaagcacggtaccacag
caattgagtggcactgatttgcctaatggacctcttgcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctacgtcctctgttatacagggg
catcaaatcatagcagttcctcctcgctcaggatccagagtgtcccattctcctgccctg
tcatctgatcggtctacaaatggcacagcagaatgcaaaagtataaagagaccagcagag
gataatgatagggaaacagttgcaggaattccaaataaagtaggagttcgaattgttaca
atcagtgaccccaacaacgctggctgcagtgcaacgatggttgccgtgccagcgggagca
gatccaagcactgtagctaaagtagcaatagaaagtgccgttcaacagaagcagcaacat
ccaccaacgtatatacaaaatgtgctcccacagaacactcctatgacaccttcaccagct
gtgcaagtgcaaaaccagcctaacagttctcagcctcctttcagtccatccagtcaacat
gcggatcctgtgagaaaacctgggcataacttcatgtgtctgtggcagtcttgtaaaaag
tggtttcagacaccctcacaggttttctaccacgcagcaactgagcatggaggaaaagat
gtatatccagggcagtgtctttgggaaggttgtgaaccttttcagcgacagaggttttct
tttattacccatttgcaggataagcactgttcaaaagatgccctacttgcaggattaaag
caagatgaaccaggacaagcaggaaatcagaaatcttctaccaagcagcctgccgtgggg
ggcacaagctcaactcctagagcacagaaggccattgtgaaccacccaagcgctgctctc
atggctcttaggagagggtcaagaaacctcgtctttcgagattttacagatgaaaaagag
ggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggtaaa
tattcagaatgtggtcgcagattactaaagagacatgaaaacaacttatcagtgctagcc
attagtaacatggaagcttcctcaacccttgccaaatgcctttacgaacttaattttaca
gttcagagtaaagaacaagaaaaagattcagaaatgctgcagtga
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integrated database retrieval system
