Suncus etruscus (white-toothed pygmy shrew): 126022780
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Entry
126022780 CDS
T09902
Symbol
PUS7L
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126022780 (PUS7L)
Enzymes [BR:
setr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
126022780 (PUS7L)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
126022780 (PUS7L)
Prokaryotic type
126022780 (PUS7L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
MCR_beta_N
Motif
Other DBs
NCBI-GeneID:
126022780
NCBI-ProteinID:
XP_049639764
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All DBs
Position
11:complement(14224423..14252633)
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AA seq
703 aa
AA seq
DB search
MEEDTDFRVRFGSLYFITDHVGFQGTIKNSPSDFIVTEIDEHGQLVNKDTDELIYKVDEV
LSEPNSIAKKRKQNPQNIFIEKRTNKDFNSLTGCSDNNQNHQFDLEKEDTPSDKASKDKE
EKVDMLGSLLNERTYELLSQFACEIKENWNSQTEYIGPSPELSLGRILDKNQRSSLHCAV
RQKFPFLITVGRNSEIFVKPNLDCKEFCHLVSEEEAFGFFKYLDLKKENSKFSFKPDANK
DHRRAVHHFVNKKFGNLVETKSFSELNSNAGNPRVVITVRFREKAHKYRKRSLESFIKSR
IIFVPAFTLRKENLEMFEAIGFLAVKLGVIPSDFSYAGLKDKKAITYQAMVVKKVSPERL
KNIEKEIEKKRIKVFNIRSVKNSLRLGQLKGNHFDIVIRNLKSQVNDTVNLRERIWEAIE
NVKNKGFVNYYGPQRFGMGRKIHTDLIGLALLKNEMVKAVKLFLTPEDLDDPVNRAKKYF
LQTEDAKGTLALMPEFKVQERALLESLHRFGMTEEGCIQAWFSFPHSMRIFYIHAYSSKI
WNDAVSYRLATYGSRVVAGDLVCLDEDTKDENFINNKIHLVTEEEASANTYGIHQVVLPV
LGYNNQYPRNKVGQWYQETLNRDGLQTCRFRVPALKMNVPGCYRQILKQPHNLSFELMEE
SETNVKKDGSHITEATLSLLISFDLDASCYATVCLREIMKHDF
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggaagaggatacagattttagagtcaggtttggttctttgtatttcatcactgatcat
gttggctttcaaggcactatcaaaaactcaccaagtgattttattgttactgagattgat
gaacatgggcaattagtaaataaagacactgatgaactaatttataaggttgatgaagta
ttatctgagccaaattctattgccaaaaaaagaaaacaaaatcctcaaaatatattcatt
gaaaagagaacaaacaaagactttaattctttgactgggtgctctgacaataaccagaat
catcagtttgatttagaaaaagaagatactcccagtgacaaagcttccaaagacaaagaa
gagaaagttgatatgttaggctccttgttaaatgaaagaacttatgaattactgagtcag
tttgcttgtgaaataaaagagaattggaattctcaaactgagtacattggaccatctcct
gaactctcattaggtagaatccttgacaaaaatcaaaggagtagtctgcattgtgctgtt
aggcagaaatttccttttttaattactgtaggcagaaatagtgagatttttgtaaaacca
aatcttgattgtaaagaattttgtcacttggtatctgaagaagaagcatttggctttttt
aaatatttggatctaaagaaagaaaattccaaattttcctttaaacctgacgcaaacaaa
gaccacagaagagctgtacatcattttgtcaacaaaaagtttggaaatctcgtggaaacc
aaatctttctctgaactgaattctaatgccggtaatccaagggtagtgataacagtaagg
tttcgtgaaaaagcacacaagtacaggaaaagatctctggaatcttttattaaatccaga
attatttttgttccagcatttaccctacgaaaggaaaatctggaaatgtttgaagcaatt
ggttttttagctgtcaaacttggtgtgattccttcagattttagttatgccggcctaaaa
gacaagaaagccattacttatcaagcaatggttgttaaaaaagtatctccagagaggtta
aagaatattgaaaaagaaatagaaaagaagagaattaaagtgtttaacatacggtctgtg
aaaaattcccttagacttggacagctcaaaggcaatcactttgatattgtcattagaaat
ttaaaaagccaagttaatgatactgtaaacctgagagagagaatttgggaggccatagaa
aatgttaagaataaagggtttgtgaattactatggaccacagagattcgggatgggaagg
aaaatccacactgacctaattggattggctttgctgaagaatgaaatggtgaaggcggta
aaattatttcttacaccagaagatttggatgatcctgtaaatagagcaaagaagtatttt
cttcaaactgaggatgctaaaggcacacttgcactgatgcctgaattcaaagttcaagag
agagctttgctggagtcattgcatcgctttggcatgacagaagaaggttgtatccaggcg
tggttctcttttcctcattctatgcgcatattctacatccatgcttatagcagcaaaatt
tggaatgatgcagtatcttatagacttgccacatatggatcaagagtagtggcaggtgat
ttggtctgtttggatgaagatactaaggatgagaatttcataaataataaaattcatctg
gtaacagaagaagaggcatcagctaatacatatggaatacatcaggtggttcttccagtg
cttggatacaataatcaatacccaaggaacaaagtaggacaatggtaccaggaaacactt
aacagagatggactacagacatgtaggttcagagtacctgctctgaaaatgaatgttcca
ggatgctatagacagattttgaaacaacctcataatctctcatttgaattaatggaagaa
agtgagactaatgtcaaaaaagatggttcccacatcactgaagcaactttatctcttttg
atctcttttgatcttgatgcttcatgttatgctacagtttgcctgagggaaataatgaag
catgacttttga
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