Suncus etruscus (white-toothed pygmy shrew): 126022799
Help
Entry
126022799 CDS
T09902
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr05145
Toxoplasmosis
setr05146
Amoebiasis
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126022799 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126022799 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126022799 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126022799 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
126022799 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126022799 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
126022799 (LAMB1)
05145 Toxoplasmosis
126022799 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
Filo_VP35
Motif
Other DBs
NCBI-GeneID:
126022799
NCBI-ProteinID:
XP_049639791
LinkDB
All DBs
Position
1:complement(116743003..116835647)
Genome browser
AA seq
1784 aa
AA seq
DB search
MLQVFACSFLALYAVGVRAQEPEFSYGCAEGSCYPATGDLLIGRSQKLSVTSTCGLHKPE
PYCIVSHLQEDKKCFICNSQDPYHETLNPESHLIENVVTTFAPNRLKIWWQSENGVENVT
IQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGTTWGVYRYFAYDCESSFPGISTGPM
KKVDDIICDSRYSDIEPSTEGEVIFRVLDPAFKIEDPYSPRIQNLLKITNLRIKFVKLHT
LGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVHGFDEEVEGMVHGHCMCRH
NTKGLNCEQCMDFYHDLPWRPAEGRNSNACKKCNCNGHSSSCHFDIAVYLATGNVSGGVC
DDCQHNTMGRNCEQCKPFYYQHPQRDIRDPNLCEPCTCDPAGSQNEGICDSYTDFSTGLI
AGQCRCKLYVEGEQCEVCKEGFYDLSADNPYGCKSCACNPLGTTPGGNPCDSETGYCYCK
RLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSAETGQCSCRPHMIGRQCNE
VESGYYFINLDHYIYEAEEGIFGPGVSVVERQYIQDRIPSWTGAGFVRVPEGAYLEFFID
NIPYSMEYEILIRYEPQLPDYWEKAVITVQRPGKIPTSSRCGNTVPDDDNQVVSLSPGSR
YVVLPRPVCFEKGVNYTVRLELPQYTSYDSDLESPYTLIDSLVLMPFCQSLDIFTVGASG
DGLVTNSAWETFQRYRCLENSRSVVKTPMTDVCRDIIFSISALIHQTGLACECNPQGSLS
SVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCRPCECDLQGSVSAFCDTITGQCQC
FHGIYARQCDRCLPGYWGFPSCQPCQCNGHAEDCDFVTGQCLSCQDYTTGHNCERCLPGY
YGDPIIGSGDHCRPCPCPDGPESGRQFANSCYQDPITLQLTCVCNPGYIGTRCENCAPGH
FGSPSEVGGTCQPCHCHHNIDMTDPGACDKETGRCLKCLHHTEGEHCQHCRLGYYGDALQ
QDCRKCVCNYLGTVQEHCNGSDCQCDKTTGQCLCLPNVIGQNCDRCAPNTWQLASGKGCE
LCECDATRSFGPSCNEFTGQCHCMPGFGGRTCSECQELFWGDPNVECRACDCDARGIETP
QCDQSTGHCVCIEGVEGLRCDKCTRGYSGVFPDCTPCHQCFALWDTIVSELTNRTQKFLE
KAKALKISGVIGPYRETVDSIEKKVSEIKYILDQSPATEPLKNIGALFEEAEKLTKDVTE
KMTQVEEKLSDTASQSNNTAKELAALQTEAENLDRTVKELGDQLEFIKNSDIRGALDSIT
KYFQMSLEAEQRVNASTTDPGSTVEQSALIRDQVEDLMLERESQFREKQEEQARLLDELA
GKLQSLDLSAAAELTCGTPPGASCSETECGGPNCRTDEGQKKCGGPGCGGLVDIAHSAWQ
KAMDFDQDVLSALAEVEQLSKMVTEAKLRADEAKQNAQDVLLKTNATKEKVDRSNEELRN
LIKQIRNFLTEDSADLDSIEAVANEVLKMEMPSTPEQLQNLTDDIRERVESLSQVEVILQ
QSAADIARAEMLLGEAKKASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDIQG
TQNLLTSIESETAASEETLFNASQRINELERNVEELKRKAAQNSGEAEYIEKVVYTVKQS
ADEVKKSLDGELDEKYKKVENLIAQKTEESADARRKAEMLQNEAKTLLAQANSKLQLLQE
LERKYEDNQKYLEDKAQELVRLEGEVRTLLAEISHKVGVYSTCL
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaggtgttcgcatgcagtttcttagctctgtacgcggttggagtgagagctcaa
gaacccgagttcagttacggctgtgcggagggcagctgctaccccgccaccggcgacctt
ctcatcggccgctcgcagaagctctcggtgacctctacgtgcgggctgcacaagcccgag
ccctactgtattgtcagccacctccaggaggacaaaaaatgcttcatatgcaattcacaa
gatccttatcatgaaacactcaatcccgaaagtcatctcattgaaaatgtggtcactaca
tttgctccaaaccgcctaaagatttggtggcaatctgaaaatggtgtggaaaatgtaact
atccaactggacttggaagctgagttccattttactcatctcataatgactttcaagaca
ttccgccctgctgctatgctgattgaacgatcatctgactttgggaccacctggggtgtg
tacagatattttgcctatgactgtgagagctcatttccaggcatttcaactggacctatg
aaaaaagtcgatgatataatttgtgattcccgatattctgatattgagccctcaacggaa
ggagaggtgatatttcgtgttttagaccctgccttcaaaatagaagatccttatagccca
aggatacagaacctcctaaaaattaccaacctgagaatcaagtttgtgaaactgcatact
ttgggagacaatcttttggattccagaatggaaatcagagagaagtactattatgctgtt
tatgatatggttgtgcgaggaaattgcttctgctacggccatgctagtgaatgtgcccct
gtgcatggatttgatgaagaagttgaaggaatggtccatggacattgcatgtgcaggcat
aataccaagggcttgaactgtgaacagtgcatggacttttatcatgatttaccctggaga
cctgctgaaggtcgaaacagcaatgcctgcaaaaagtgtaactgcaatggacactccagt
tcatgccactttgacatcgcagtgtacttagccacgggaaatgttagtggaggcgtatgt
gatgactgtcagcacaacacaatgggacgcaactgtgagcagtgcaaacccttttattat
cagcacccacaaagagacatccgggacccaaatctctgtgaaccatgtacctgtgaccca
gctggttctcagaatgaaggaatttgtgacagttacactgatttttctactggtctcatt
gctggccaatgtcgctgtaaattatatgtggaaggagaacagtgtgaagtttgcaaagaa
ggcttttatgacttaagtgctgacaatccatatggttgtaaatcgtgtgcttgcaatcct
ctgggaacaactcctggtgggaatccttgtgattcggagactggctattgctactgtaag
cgtttggtgacaggacagcattgtgatcagtgtctgccagagcattggggcttaagcaat
gatttggatggatgtcgaccttgtgactgtgaccttgggggagccttgaataatagctgc
tctgcagaaactggccagtgctcctgccgaccccacatgattgggcgtcagtgcaatgaa
gtggaatctggttattattttataaacttggaccactacatctatgaagctgaagaaggc
atctttggacctggtgtcagtgtagtggagcggcaatatatccaggacaggattccttcc
tggactggggcaggttttgttcgagtgcctgaaggagcctacttggagtttttcattgac
aacataccttattccatggagtatgagattctgattcgctatgaaccacagcttcctgac
tattgggaaaaagctgtcatcacagtgcagagacctggaaagatcccaaccagcagtcga
tgtggtaatactgttcctgatgatgacaaccaggtggtgtctctctcacctggctctagg
tatgtggttcttcctcgccctgtatgcttcgagaaaggtgtgaactacacagtgaggtta
gagctgccccagtacacctcctatgatagtgacctggagagcccctacacgctgattgac
tcacttgttctcatgccattctgccaatcgcttgatatcttcacggtgggagcttcagga
gatgggttagtcaccaacagcgcctgggagaccttccagagataccgatgtttagaaaac
agcagaagcgtggtgaaaacaccgatgactgatgtttgcagagacatcatctttagcatt
tctgcactcatacatcagacaggcctggcctgtgagtgcaaccctcagggctccctgagc
tccgtctgtgaccccaatggaggccagtgccaatgccggcccaatgtggtgggaagaacc
tgtgacaggtgtgctcctggcacgtttggattcggccccagtggatgcagaccttgtgag
tgtgatctgcaaggatctgtcagtgccttttgcgataccatcactggccagtgccagtgt
ttccacggtatatacgcacgacagtgtgatcggtgtttaccaggctactggggctttcca
agctgccagccctgccagtgtaatggccatgctgaggactgcgactttgtgacagggcag
tgcttgagctgccaggactataccacgggccataactgtgaaagatgcctgcctggttac
tatggtgatcccatcattggatcaggagatcactgccgaccctgtccttgcccagatggt
cctgagagtggacgccagtttgccaatagctgttatcaagatcctattactctccagctc
acgtgtgtttgtaatccaggatacattggcaccagatgtgagaattgtgcccctggccac
ttcggcagcccttctgaggtgggcggtacatgccagccttgccactgtcaccacaatatt
gatatgacagacccaggagcctgtgacaaggaaacggggcgttgcctcaagtgcctgcac
cacacggaaggggagcactgccagcactgtcgcctgggatattatggggatgccctccag
caagactgtcgaaagtgtgtctgtaactacctgggtactgtgcaggagcactgtaatggc
tccgactgccagtgtgacaagactacagggcaatgcttatgtcttcccaacgtcatcgga
cagaactgtgaccgctgtgcccccaacacgtggcagctggccagcggaaaaggctgtgaa
ctttgcgaatgtgatgctactcgttccttcggaccatcttgtaatgagttcacaggacag
tgccactgcatgcctggctttggaggccgtacctgcagcgaatgccaggagctcttctgg
ggagatcccaacgtggagtgccgagcctgtgactgtgatgccaggggcattgagacacca
cagtgtgaccagtccacgggccattgtgtctgcattgagggtgttgaaggtctgcgctgt
gacaaatgcactcgaggatactcgggtgtcttcccagactgcactccctgccaccagtgc
ttcgctttgtgggatacaatcgtctctgaattgaccaacaggacccagaaatttctagag
aaagccaaggccttaaagatcagcggagtcatcgggccttaccgggagaccgtggactca
atagagaagaaagtcagtgagattaaatacatcctggatcaaagccctgccacagagccg
ctgaaaaacattggggctctctttgaggaagcagagaaattaaccaaagacgttactgaa
aaaatgactcaagtagaagagaaattatctgacacagcttcacaaagcaacaacacagcc
aaagaactagctgctctacagacagaagcagaaaatctggatcgtacagtgaaggagctt
ggtgatcaattggaatttatcaaaaactcagatatccgaggtgccctagacagcatcacc
aagtatttccagatgtctctggaggctgagcagcgggtgaatgcctccaccactgaccct
ggcagcaccgtggaacagtcagctctcattcgagaccaagtagaagacttgatgttggaa
cgagagtcccaatttagggagaaacaagaagaacaggcccgacttctggatgaactggca
ggcaaactacagagtttagacctatcagctgctgcagaactgacctgtggaacgcctcca
ggagcctcctgttctgagactgaatgtggcggcccaaactgcagaactgatgaaggacag
aagaaatgtggagggcccggctgtggtggtctcgtcgatattgcacattctgcctggcag
aaagccatggacttcgaccaagatgtcctgagtgctctggctgaggtggagcagctctcc
aagatggtcaccgaagcaaaacttagggcagatgaagcaaaacagaatgcacaagatgtt
ctgttgaaaaccaatgctaccaaagaaaaagtagacaggagtaatgaggagctgagaaat
ctgatcaagcaaatcagaaactttttgactgaagacagcgctgatttggacagcattgaa
gccgttgctaatgaagtgttgaaaatggaaatgcctagcaccccagagcagttacagaac
ttgacagacgacatccgggaaagagtggaaagcctttctcaagtcgaagttattctgcaa
caaagtgctgccgacattgccagagcggagatgttgttaggagaagctaaaaaagccagc
aaaagtgcaacagatgtaaaagtcactgcagacatggtaaaggaagctctggaagaagca
gaaaaggcccaaattgcagcagagaaggcaattaaacaagcagacgaggacatccagggg
acacagaatctgctaacttcgattgaatcagaaaccgcagcatctgaagaaactctgttc
aatgcctcccaacgcatcaatgagttagagaggaatgtggaagaacttaagcggaaagct
gctcagaactctggagaggcagagtatattgaaaaagtagtatatactgtgaagcaaagt
gcagatgaggtgaagaagtctctggatggcgaacttgatgaaaaatataagaaagtagaa
aacttaattgcccaaaaaactgaagagtcagctgatgccagaaggaaagctgaaatgcta
cagaatgaagcaaagacacttttagctcaagcaaacagcaaactacaactgctacaagag
ttagaaagaaaatatgaggacaatcaaaaatatttagaagacaaagctcaagaactagta
cgattggaaggagaagttcgtacactcctggcggagataagccataaagttggtgtttat
agcacctgcttgtaa
DBGET
integrated database retrieval system
