Suncus etruscus (white-toothed pygmy shrew): 126022941
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Entry
126022941 CDS
T09902
Symbol
WHAMM
Name
(RefSeq) LOW QUALITY PROTEIN: WASP homolog-associated protein with actin, membranes and microtubules
KO
K20479
WASP homolog-associated protein with actin, membranes and microtubules
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
126022941 (WHAMM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126022941 (WHAMM)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
126022941 (WHAMM)
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
126022941 (WHAMM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Motif
Other DBs
NCBI-GeneID:
126022941
NCBI-ProteinID:
XP_049639908
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All DBs
Position
11:9833519..9847163
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AA seq
812 aa
AA seq
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MADEQPDSLEGWVPVRAGLFSERERHRLHFLVGWNAAEARFAVTCHDRTAQRRLRAGAGP
DAAQAGASLGWSGLLSAAALRGAHRQLSALWPPLERCFPELPAELDAGRRGGWTLWARAP
EPDDAELQAACAGLERYLGLAADGCGGAAVRDALLPAPGAPDDCENPREFRERALRARSE
EASVRLRQVLQGHDQASTMVALMRLYAEEEEAYQALVTSTTAYFQNLLQPFRDMREVATS
CKLAILKSLEEEELGPRRVDALQREAQEWAQRVHEAVVSIQDITVDYFTATTKALAGMLR
QMERDKKRFGQAAWATARPRLENLKLQLAQETLQLLRAKELCLGRRRAAIRGKMEDLPEE
EKNVDVVDELELQYYEVQLESYEIKFEILRNEEILIITQLDSIRRYIKDKEEEVIYYDPC
ESPEELRVADGAAELQAEEDKGCSGDLGALRRRCHQLEARRGCICARRAQLRNRKVGTEV
VLPPFRTGRIGAEKNHQLRLQQAHESTRRCHQHHGAQMKRDRIKEEEGKRKEWVEQERQK
RCSGCAPFKEVKAGHDFREMLALHTPKPRFGPQHTIVPRALRSGPWTQIQEEALRMAGHQ
GPPKPKMHLGSGKPKMHLGSECGTPPLAPSLDLPSPELQDSRTTAPLGDQMHCTPRDKVL
PPPPPPPPLPPPPPPPPPPPLAPPACPPPRGLHIQTLGNNDHNDRPRPLVCDSSAQTLVA
LSAGARGPGSMDEVLASLRQDLAPHDAREDILAAIRHGVRLRKVVPGQALGPSVPCTSDL
ERSIKAALQRIKKASADSEEDEQEQGLGEWEH
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgagcagcccgacagcctggagggctgggtgccggtgcgcgccgggctgttc
tccgagcgcgagcggcaccggctgcacttcctggtgggctggaacgccgccgaggcgcgc
ttcgctgtcacctgccacgaccgcacggcgcagcggcggctccgcgcgggggccgggccg
gacgcggcgcaggccggggcgtcgctcggctggtccgggctgctgtcggccgccgcgctc
cgcggcgcgcaccggcagctctcggcgctgtggccgccgctcgagcgctgcttcccggag
ttgccggccgagctggacgcggggcggcgcggcggctggacgctgtgggcgcgcgcgccc
gagcccgacgacgcggagctgcaggcggcctgcgcggggctggagcgctacctgggcctg
gcggccgacggctgcggcggcgcggccgtgcgcgacgcgctcctgcccgcgcccggcgcg
cccgacgactgcgagaaccctcgagagttccgggagcgcgctctgcgcgccaggagcgag
gaggcgagcgtgcgcctgcgccaggttctgcagggacatgaccaggccagcaccatggtg
gctctgatgaggctctatgcagaggaagaggaagcctaccaggcactggtcacatcgacc
accgcgtatttccagaaccttctgcagccctttagggacatgcgcgaagtcgcgacttca
tgtaagctcgctattttgaaatctctggaggaggaggagctgggtccccgaagggtagat
gccctgcagagggaagcccaggagtgggcgcagcgggtccacgaggccgtggtctccatc
caggacatcacagtggattatttcacagcgacaacaaaagctttagcaggaatgctgagg
cagatggagagggacaagaagaggtttggccaggccgcctgggccaccgctaggccccgc
ttagaaaacctcaagttgcagctggctcaggagacactgcagctgctgagggccaaggag
ctgtgcttaggccgcagacgagctgcgattcgagggaagatggaagatcttccagaggaa
gaaaagaacgtggatgttgtggatgaattagagctgcaatattacgaggtccaattagaa
tcatatgagattaaatttgagatattaagaaatgaagaaatactgataattacacagctg
gactctattagaagatatataaaagacaaggaggaggaggtcatctactacgatccctgt
gagagtcccgaggagctgagagtggctgatggtgctgctgagctgcaggctgaggaggac
aagggctgcagcggggatctgggagcactgcgccgtcgctgccaccagctggaggcccgc
cggggctgcatctgtgccaggagagcccagctcaggaacaggaaggtgggcactgaggtg
gtcctccctcccttcaggacaggaaggatcggtgcagagaaaaaccatcaactcaggctg
caacaggcccacgagagcacaaggcgttgtcatcagcaccacggagcccagatgaaaagg
gacagaatcaaagaggaagaaggaaagaggaaagagtgggttgaacaagagcggcagaaa
cgctgcagcggctgcgcgccttttaaggaggtgaaagctgggcacgatttcagggagatg
ctggccctgcacacaccaaaacccaggttcggtccccagcacaccatagtgccccgagcc
ctcaggagtggtccctggactcagatccaggaggaagccctgagaatggctggacatcag
ggtccaccgaaaccaaagatgcacttgggatcagggaaaccaaagatgcacttgggatca
gaatgtggaaccccacccctggccccgagcctcgacctgccaagcccagaactccaagat
tccaggacaactgcgcctttgggtgaccaaatgcattgcacacccagggacaaggtgtta
ccaccccctccacctccacctccactgccaccgccaccgccaccacctccaccgccccct
ctagcccctccagcttgtcctccgcctcggggcctgcacatccagactttggggaacaat
gaccacaatgaccgaccgaggcccttggtgtgcgactcatctgctcagacactcgttgca
ctctccgctggagcccgaggtccaggttccatggatgaggtactggcctctctgcggcaa
gacctggctccccatgatgccagggaggacattctggctgccatccgtcacggagtgcgg
ctgaggaaagtggtcccgggccaagctctgggccccagcgtaccctgcaccagtgacctg
gagaggagtatcaaggctgcgctacagcgaatcaagaaggcatcggcagactcagaggag
gatgagcaggagcaggggctgggcgagtgggaacactaa
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