Suncus etruscus (white-toothed pygmy shrew): 126023461
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Entry
126023461 CDS
T09902
Symbol
SNX1
Name
(RefSeq) sorting nexin-1
KO
K17917
sorting nexin-1/2
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
126023461 (SNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126023461 (SNX1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126023461 (SNX1)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Macropinocytosis
Sorting nexins
126023461 (SNX1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
126023461 (SNX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps5
PX
Sorting_nexin
BAR_3_WASP_bdg
HR1
MVD-like_N
Motif
Other DBs
NCBI-GeneID:
126023461
NCBI-ProteinID:
XP_049640105
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All DBs
Position
1:22418441..22465201
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AA seq
522 aa
AA seq
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MAAAGGGCSTSERLPPPFPGVDPESEGAAEESEPEAGDSDTEGEDIFTGAGAANKPQSPK
RIVSPLPFTHGSKENGIHEEQDKEPQDLFADATVELSLDSTQNNQKKGPAKALISPSQEA
TSSSKPNLSSYEELEEEEQEDDFDLTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKQ
FAVKRRFSDFLGLYEKLSEKHSQNGFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRA
ALERYLQRIVNHPTMLQDPDVREFLEKEELPRAVGTQTLSGAGLLKMFNKATDAVSKMTI
KMNESDIWFEEKLQEVECEEQRLRKLHAVVETLVTHRKELALNTAQFAKSLAMLGSSEDN
TALSRALSQLAEVEEKIEQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKMWQRW
QDAQTTLQKKREAEARLLWANKPDKLQQAKDEITEWESRVTLYERDFERISTVVRKEVIR
FEKEKSKDFKNHVIKYLETLLYSQQQLAKYWEAFLPEAKAIS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggctggcggcggctgtagcacctcggagagactccctccgcccttccccggc
gtggaccccgagtccgaaggggcagccgaggagtcggagcccgaggccggggacagtgac
accgagggggaggatattttcaccggcgccggggcggccaataagccccaatctccaaag
agaattgtttctcctctgcctttcacccatggctctaaagaaaatgggatccatgaagaa
caggataaagagcctcaggatctctttgcagatgctactgtggaactctccctggatagc
acacagaataatcagaaaaagggcccagccaaagcacttatttctccttcacaagaagcc
acaagttcttctaagcccaatttatccagctacgaagagctagaagaagaagaacaggaa
gatgactttgatttgacagttggtattactgatcctgagaagataggtgatggcatgaat
gcctatgtagcctacaaagttacaacacagacaagcttaccaatgttcagaagtaaacag
tttgcagtgaagaggagatttagtgactttctgggtctctatgagaagctttcagaaaaa
cactctcagaacggcttcattgttcctcctccacctgagaagagcctgataggaatgaca
aaagtaaaagttgggaaagaagattcttcttctgcagaatttcttgagaaacggagggct
gctctagaaaggtaccttcagaggattgtgaatcaccctaccatgttacaggatcctgat
gtccgggagttcttagagaaagaagagctgccacgtgctgtgggtacccagacgttgagt
ggtgctggcctccttaagatgttcaacaaagccacagatgcagtcagcaaaatgactatc
aagatgaatgaatcagacatttggtttgaggagaagctccaggaggttgagtgtgaggaa
cagcgcctgcggaagctgcatgcagttgtagagactctagtcacccacaggaaagagcta
gcactgaacacagcccagtttgcaaagagtctggctatgttggggagctcagaggacaac
acagcattgtctcgggcactttcccagctggctgaagtggaagagaaaattgagcagctc
caccaggaacaggccaacaatgacttcttcctcctggccgagctcttgagtgattacatt
cgcctcctggccatagttcgtgctgcctttgaccagcgcatgaagatgtggcagcgctgg
caggatgctcagaccacactgcagaagaagcgggaagcagaagcccgactgctatgggcc
aacaaacctgacaagctgcagcaggccaaggatgagatcacagagtgggaatctcgtgtg
actctctatgaaagggactttgaaaggatttcaactgtggtccggaaagaagtgatacgt
tttgagaaagagaaatccaaggacttcaaaaatcacgtgatcaagtaccttgagaccctc
ctgtactcacagcagcagctggccaagtactgggaagccttccttccagaggcaaaggcc
atctcctaa
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