Suncus etruscus (white-toothed pygmy shrew): 126023806
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Entry
126023806 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126023806
03015 mRNA surveillance pathway
126023806
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126023806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126023806
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126023806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
126023806
NCBI-ProteinID:
XP_049640135
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All DBs
Position
12:92328654..92330717
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AA seq
689 aa
AA seq
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MPSDGRCGETLQALRRSDKGRLRYHRDWLPRGEDVLGEGGSLPALSSYSGWVVEHVLPNS
APERPAPSEESERPSRVPASSGRNAAAVSPATRDGTRDQQECQPLDSKALRASRGMEVEG
CLRMYELAHRRRGTPGLRHWQEEQERQVRALSERASEQLQRFEEHQELRRHQECQDLRRV
LEKSAREALARQEQLQAAHRHRAQLLHXRLREAEQQRLKAEEQERLGQEEAEGRGPSLCA
PQEERPRLPQPPAAWAQQPHLLQGDPATSRAPASPPCSHISALTPGSGEHLPPAAEDQAV
AEQALQDTRDLLAPLQQEVAAAKGEKRRQEEAARAKPQPSHTQKEPEVHKDLPAPSQGSG
GKQSQGLQGQAQESTMQWYQQLQDAADRCALALALGGLTNAQDSQTKKIKMNLQKAATIP
VSQISAVAGSKLQEIFHRIHALLSGQPVSTXGHSVSVTQTPQGLDFVQYKLAEKLVKQGE
EEVASHHQAAFPIALVAAGIWELHPRXGDLLLAHLHKKCPYSVPFYPAFREGMALEDYQR
SLGYRVQGATVEQQHSFLKRMSGMMRLYAAILQLRWPGGTPRRLXPHGLNQGWRWLAQIL
NLEPLPEVTATLLYDFLEVCGNALMRQYRLQFWKMLLLLQEEYLPRMEAITSPGQXGSLI
RLQQFLEQCLHDREVPVPKGFLTSSFWRS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggacgggcgctgcggggagactctgcaggcgctgcgccgctccgacaaaggc
cgcctgcgctaccaccgcgactggctgccgcggggcgaggatgtcctgggagaagggggg
tccctccccgcgctctcttcctactccggatgggtggtggagcatgtgttgccgaactcc
gcaccagagcgcccagctccctcggaggagtccgagcgaccttcccgtgtccccgcgtct
tcgggaagaaatgctgctgccgtgtccccagccactcgggatggcacccgggaccaacag
gaatgtcagcctctcgactcgaaagcacttcgcgccagccgggggatggaggtcgaaggc
tgcctccgaatgtacgagctggcgcacaggaggagaggcacaccaggcctgcggcactgg
caggaggagcaggagcgccaggtgcgcgccctgtcggagagggcgtcggagcagctgcag
cgcttcgaggagcaccaggagctgaggcgacaccaagagtgccaggacctgcggcgggtc
ctggagaagagcgcccgggaggccctggcccggcaagagcagctgcaagccgcgcatcgc
cacagagcccagcttctccacnagaggctccgggaagcagagcagcagcgcctcaaggca
gaggagcaggagcgacttggccaggaggaggctgagggtcgtgggccaagcctgtgcgcc
ccgcaggaggagcgaccgcgcctcccccagccgccagctgcctgggcccagcagccgcac
ttgcttcagggggatcccgccacctcgcgcgcccctgccagcccaccgtgcagccacatc
tccgccctcactcctggctccggggagcatctccctcccgctgcagaggaccaggctgtg
gcggagcaagctctccaggacactcgggacctccttgcccccctgcagcaggaggtggcc
gcggccaaaggagaaaagcggcggcaggaagaagcggcccgggccaagcctcagccatcg
cacacgcagaaggagcctgaggtccacaaggacttgccagcccccagccagggctcggga
gggaagcagagccaaggtctccagggccaggcccaggagagcaccatgcagtggtaccag
cagctgcaggatgcagccgaccggtgcgccttggccttggccttgggtggcctcaccaac
gcccaagacagccagaccaagaagatcaagatgaacctccagaaggcagccaccatcccc
gtgagccagatctccgccgtggcaggctccaagctccaagagatcttccacaggatccac
gccctgctgtctggccaacctgtttctaccnggggccattccgtgtcggtcactcagacc
ccccagggactggacttcgtgcagtacaagctagcggagaagttggtgaaacaaggagaa
gaggaggtggcctcccaccaccaagctgccttccccatcgccctggtggccgctggcatc
tgggagctccaccccaggngtggagacctcttgctcgctcacctgcacaagaagtgtcct
tactccgtcccattctacccagctttccgagaagggatggctcttgaggactaccagagg
agtcttggctaccgggttcaaggggccaccgtggagcagcagcacagcttcctgaagcgc
atgtcggggatgatgcgcctctatgctgccatccttcagctgcggtggccaggcggaacc
cccaggagactcnnccctcacggcctcaatcagggctggcgctggttggcccagatcttg
aacctggagccgctgcccgaggtgaccgccacccttctctatgacttcttggaggtgtgt
ggcaatgccctgatgaggcagtatcggctccagttctggaagatgctccttctcctccaa
gaggagtacttgcccaggatggaagccatcaccagcccaggccagnatggctccctcatt
cgccttcagcagttcttggagcaatgtttgcacgacagggaggtgcccgtccccaaaggc
ttcctgacctcttccttctggcgttcctga
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