Suncus etruscus (white-toothed pygmy shrew): 126023808
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Entry
126023808 CDS
T09902
Name
(RefSeq) LOW QUALITY PROTEIN: mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126023808
03015 mRNA surveillance pathway
126023808
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126023808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126023808
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126023808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
126023808
NCBI-ProteinID:
XP_049640138
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All DBs
Position
12:92309724..92311788
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AA seq
688 aa
AA seq
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MPSDGRCGETLQALRRSDKGRLRYHRDWLPRGEDVLGEGGSLPALSSYSGWVVEHVLPNS
APERPAPSEESERPSRVPASSGRNAAXAVSPATRDGTRDQQECQPLDSKALRASRGXEVE
GCLRMYELAHRRRGTPGLRHWQEEQERQVRALSERASEQLQRFEEHQELRRHQECQDLRR
VLEKSAREALARQEQLQAAHRHRAQLLHQRLREAEQQRLKAEEQERLGQEEAEGRGPSLC
APQEERPRLPQPPAAWAQQPHLLQGDPATSRAPASPPCSHISALTPGSGEHLPPAAEDQA
VAEQALQDTRDLLAPLQQEVAAAKGEKRRQEEAARAKPQPSHTQKEPEVHKDLPAPSQGS
GGKQSQGLQGQAQESTMQWYQQLQDAADRCALALGGLTNAQDSQTKKIKMNLQKAATIPV
SQISAVAGSKLQEIFHRIHALLSGQPVSTGGHSVSVTQTPQGLDFVQYKLAEKLVKQGEE
EVASHHQAAFPIALVAAGIWELHPRVGDLLLAHLHKKCPYSVPFYPAFREGMALEDYQRS
LGYRVQGATVEQQHSFLKRMSGMMRLYAAILQLRWPGGNPQEXSPHGLNQGWRWLAQILN
LEPLPEVTATLLYDFLEVCGNALMRQYRLQFWKMLLLLQEEYLPRMEAITSPGQMGSLIR
LQQFLEQCLHDREVPVPKGFLTSSFWRS
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggacgggcgctgcggggagactctgcaggcgctgcgccgctccgacaaaggc
cgcctgcgctaccaccgcgactggctgccgcggggcgaggatgtcctgggagaagggggg
tccctccccgcgctctcttcctactccggatgggtggtggagcatgtgttgccgaactcc
gcaccagagcgcccagctccctcggaggagtccgagcgaccttcccgtgtccccgcgtct
tcgggaagaaatgctgcgnntgccgtgtccccagccactcgggatggcacccgggaccaa
caggaatgtcagcctctcgactcgaaagcacttcgcgccagccggggantggaggtcgaa
ggctgcctccgaatgtacgagctggcgcacaggaggagaggcacaccaggcctgcggcac
tggcaggaggagcaggagcgccaggtgcgcgccctgtcggagagggcgtcggagcagctg
cagcgcttcgaggagcaccaggagctgaggcgacaccaagagtgccaggacctgcggcgg
gtcctggagaagagcgcccgggaggccctggcccggcaagagcagctgcaagccgcgcat
cgccacagagcccagcttctccaccagaggctccgggaagcagagcagcagcgcctcaag
gcagaggagcaggagcgacttggccaggaggaggctgagggtcgtgggccaagcctgtgc
gccccgcaggaggagcgaccgcgcctcccccagccgccagctgcctgggcccagcagccg
cacttgcttcagggggatcccgccacctcgcgcgcccctgccagcccaccgtgcagccac
atctccgccctcactcctggctccggggagcatctccctcccgctgcagaggaccaggct
gtggcggagcaagctctccaggacactcgggacctccttgcccccctgcagcaggaggtg
gccgcggccaagggagaaaagcggcggcaggaagaagcggcccgggccaagcctcagcca
tcgcacacgcagaaggagcctgaggtccacaaggacttgccagcccccagccagggctcg
ggagggaagcagagccaaggtctccagggccaggcccaggagagcaccatgcagtggtac
cagcagctgcaggatgcagccgaccggtgcgccttggccttgggtggcctcaccaacgcc
caagacagccagaccaagaagatcaagatgaacctccagaaggcagccaccatccccgtg
agccagatctccgccgtggcaggctccaagctccaagagatcttccacaggatccacgcc
ctgctgtctggccaacctgtttctaccgggggccattccgtgtcggtcactcagaccccc
cagggactggacttcgtgcagtacaagctagcggagaagttggtgaaacaaggagaagag
gaggtggcctcccaccaccaagctgccttccccatcgccctggtggccgctggcatctgg
gagctccaccccagggtgggagacctcttgctcgctcacctgcacaagaagtgtccttac
tccgtcccattctacccagctttccgagaagggatggctcttgaggactaccagaggagt
cttggctaccgggttcaaggggccaccgtggagcagcagcacagcttcctgaagcgcatg
tcggggatgatgcgcctctatgctgccatccttcagctgcggtggccaggcgggaacccc
caggagnactccccccacggcctcaatcagggctggcgctggttggcccagatcttgaac
ctggagccgctgcccgaggtgaccgccacccttctctatgacttcttggaggtgtgtggc
aatgccctgatgaggcagtatcggctccagttctggaagatgctccttctcctccaagag
gagtacttgcccaggatggaagccatcaccagcccaggccagatgggctccctcattcgc
cttcagcagttcttggagcaatgtttgcacgacagggaggtgcccgtccccaaaggcttc
ctgacctcttccttctggcgttcctga
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