Suncus etruscus (white-toothed pygmy shrew): 126023809
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Entry
126023809 CDS
T09902
Name
(RefSeq) mRNA export factor GLE1-like
KO
K18723
nucleoporin GLE1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03013
Nucleocytoplasmic transport
setr03015
mRNA surveillance pathway
setr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126023809
03015 mRNA surveillance pathway
126023809
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126023809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
setr03019
]
126023809
Messenger RNA biogenesis [BR:
setr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126023809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
126023809
NCBI-ProteinID:
XP_049640139
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Position
12:92324363..92326426
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AA seq
687 aa
AA seq
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MPSDGRCGETLQALRRSDKGRLRYHRDWLPRGEDVLGEGGSLPALSSYSGWVVEHVLPNS
APERPAPSEESERPSRVPASSGRNAAAVSPATRDGTRDQQECQPLDSKALRASRGMEVEG
CLRMYELAHRRRGTPGLRHWQEEQERQVRALSERASEQLQRFEEHQELRRHQECQDLRRV
LEKSAREALARQEQLQAAHRHRAQLLHQRLREAEQQRLKAEEQERLGQEEAEGRGPSLCA
PQEERPRLPQPPAAWAQQPHLLQGDPATSRAPASPPCSHISALTPGSGEHLPPAAEDQAV
AEQALQDTRDLLAPLQQEVAAAKGEKRRQEEAARAKPQPSHTQKEPEVHKDLPAPSQGSG
GKQSQGLQGQAQESTMQWYQQLQDAADRCALALGGLTNAQDSQTKKIKMNLQKAATIPVS
QISAVAGSKLQEIFHRIHALLSGQPVSTGGHSVSVTQTPQGLDFVQYKLAEKLVKQGEEE
VASHHQAAFPIALVAAGIWELHPRVGDLLLAHLHKKCPYSVPFYPAFREGMALEDYQRSL
GYRVQGATVEQQHSFLKRMSGMMRLYAAILQLRWPGGNPQETPPHGLNQGWRWLAQILNL
EPLPEVTATLLYDFLEVCGNALMRQYRLQFWKMLLLLQEEYLPRMEAITSPGQMGSLIRL
QQFLEQCLHDREVPVPKGFLTSSFWRS
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgccctcggacgggcgctgcggggagactctgcaggcgctgcgccgctccgacaaaggc
cgcctgcgctaccaccgcgactggctgccgcggggcgaggatgtcctgggagaagggggg
tccctccccgcgctctcttcctactccggatgggtggtggagcatgtgttgccgaactcc
gcaccagagcgcccagctccctcggaggagtccgagcgaccttcccgtgtccccgcgtct
tcgggaagaaatgctgctgccgtgtccccagccactcgggatggcacccgggaccaacag
gaatgtcagcctctcgactcgaaagcacttcgcgccagccgggggatggaggtcgaaggc
tgcctccgaatgtacgagctggcgcacaggaggagaggcacaccaggcctgcggcactgg
caggaggagcaggagcgccaggtgcgcgccctgtcggagagggcgtcggagcagctgcag
cgcttcgaggagcaccaggagctgaggcgacaccaagagtgccaggacctgcggcgggtc
ctggagaagagcgcccgggaggccctggcccggcaagagcagctgcaagccgcgcatcgc
cacagagcccagcttctccaccagaggctccgggaagcagagcagcagcgcctcaaggca
gaggagcaggagcgacttggccaggaggaggctgagggtcgtgggccaagcctgtgcgcc
ccgcaggaggagcgaccgcgcctcccccagccgccagctgcctgggcccagcagccgcac
ttgcttcagggggatcccgccacctcgcgcgcccctgccagcccaccgtgcagccacatc
tccgccctcactcctggctccggggagcatctccctcccgctgcagaggaccaggctgtg
gcggagcaagctctccaggacactcgggacctccttgcccccctgcagcaggaggtggcc
gcggccaagggagaaaagcggcggcaggaagaagcggcccgggccaagcctcagccatcg
cacacgcagaaggagcctgaggtccacaaggacttgccagcccccagccagggctcggga
gggaagcagagccaaggtctccagggccaggcccaggagagcaccatgcagtggtaccag
cagctgcaggatgcagccgaccggtgcgccttggccttgggtggcctcaccaacgcccaa
gacagccagaccaagaagatcaagatgaacctccagaaggcagccaccatccccgtgagc
cagatctccgccgtggcaggctccaagctccaagagatcttccacaggatccacgccctg
ctgtctggccaacctgtttctaccgggggccattccgtgtcggtcactcagaccccccag
ggactggacttcgtgcagtacaagctagcggagaagttggtgaaacaaggagaagaggag
gtggcctcccaccaccaagctgccttccccatcgccctggtggccgctggcatctgggag
ctccaccccagggtgggagacctcttgctcgctcacctgcacaagaagtgtccttactcc
gtcccattctacccagctttccgagaagggatggctcttgaggactaccagaggagtctt
ggctaccgggttcaaggggccaccgtggagcagcagcacagcttcctgaagcgcatgtcg
gggatgatgcgcctctatgctgccatccttcagctgcggtggccaggcgggaacccccag
gagactccccctcacggcctcaatcagggctggcgctggttggcccagatcttgaacctg
gagccgctgcccgaggtgaccgccacccttctctatgacttcttggaggtgtgtggcaat
gccctgatgaggcagtatcggctccagttctggaagatgctccttctcctccaagaggag
tacttgcccaggatggaagccatcaccagcccaggccagatgggctccctcattcgcctt
cagcagttcttggagcaatgtttgcacgacagggaggtgcccgtccccaaaggcttcctg
acctcttccttctggcgttcctga
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