Suncus etruscus (white-toothed pygmy shrew): 126023819
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Entry
126023819 CDS
T09902
Symbol
SPAST
Name
(RefSeq) spastin isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126023819 (SPAST)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126023819 (SPAST)
Enzymes [BR:
setr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
126023819 (SPAST)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
126023819 (SPAST)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126023819 (SPAST)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
RuvB_N
AAA_5
MIT
TIP49
AAA_22
AAA_16
AAA_14
Mg_chelatase
DUF815
IstB_IS21
AAA_24
nSTAND3
NPHP3_N
AAA_2
DUF4368
KH_Vigilin
Motif
Other DBs
NCBI-GeneID:
126023819
NCBI-ProteinID:
XP_049640152
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Position
12:97778168..97823755
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AA seq
529 aa
AA seq
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MLPAAGAVDAANLDAAGSTPAPPVGEADRVRAFHKRAFECISLALRIDEDDQGQKEKAVE
WYKKGIEELEKGIAVTVTGKGEQCERARRLQAKMMTNLVMAKDRLQLLEKLQPVLQFSKS
QTDVYNDNTNLTCRNGHLQSESGAVPKRKDPLSHTSNSLPRSKTVMKTGSTGLSGHHRAP
SYSGLSMVSGGRQGPGTAPALQKNTAKGNRTNKPSTPTTAARKKKDLKNFRNVDSNLANL
IMNEIVDNGTAVKFDDIAGQELAKQALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNG
KTMLAKAVAAESNATFFNISAASLTSKYVGEGEKLVRALFAVARELQPSIIFIDEVDSLL
CERREGEHDASRRLKTEFLIEFDGVQSAGDDRVLVMGATNRPQELDEAVLRRFIKRVYVS
LPNEETRLLLLKNLLCKQGSPLTQKELAQLARMTDGYSGSDLTALAKDAALGPIRELKPE
QVKNMSASEMRNIRLADFTESLKKIKRSVSPQTLEAYIRWNKDFGDTTV
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgccgccggcgccgtcgacgccgccaacctggacgccgcaggttcgaccccc
gcgccccccgtcggggaggccgatcgcgtgcgcgccttccacaagcgcgccttcgagtgc
atctcgctcgccctgcgcatcgacgaggacgaccagggacaaaaggagaaagctgtggaa
tggtataagaaaggcattgaagaactggaaaaaggaatagccgtcacagttacgggaaaa
ggtgaacagtgtgaaagagctagacgccttcaagctaaaatgatgacaaatctggtgatg
gccaaggaccgtttacaacttctagagaagctacagccagttttgcaattctccaagtca
caaacggatgtctataatgacaatactaacctgacctgccgcaatggacatcttcagtca
gaaagtggagctgttccgaaaagaaaagaccccttatctcacactagtaattccctgcct
cgttcgaaaacagtgatgaaaacgggatccacgggtctatcgggccatcaccgagcgcct
agttacagcggactgtccatggtgtctggagggaggcaggggcctgggactgcacctgcc
cttcagaagaatactgcaaaaggaaacagaacgaataaaccttctacccctacgactgct
gctcgtaaaaagaaagacttgaagaactttcggaatgtggacagcaatcttgctaacctt
attatgaatgaaattgtggacaatggaacagctgttaagtttgacgatatagctggccag
gagttggcaaaacaggcattgcaagaaattgtgattcttccttctctcaggcctgagttg
ttcacaggacttagagctccggcccggggattgctactctttggtccacctggaaatggc
aaaacaatgctggcaaaagcagtagctgcagagtctaatgcaaccttctttaatataagt
gctgcaagtttgacttcgaaatatgtgggagaaggagagaaattggtgagagctcttttt
gctgtggctcgagagcttcagccttccatcatttttatagacgaggtcgacagcctcctg
tgtgagaggagggaaggggagcatgatgccagtcggcgactcaagacagaatttctcata
gaatttgacggcgtccagtctgcaggcgatgaccgagtcctcgtgatgggcgccaccaac
aggccgcaggaactcgatgaggctgtgctcaggcgttttatcaaacgagtgtatgtctct
ttgccaaatgaggagacgaggctacttttacttaaaaatctgttatgtaaacaaggaagc
ccactaacccaaaaagaactcgcgcagcttgctagaatgactgatggatactcaggaagt
gatctaacagctttggcaaaagatgcagcactgggtcctattcgggaactgaaaccagaa
caagtgaagaacatgtctgctagtgagatgagaaatattcgattggctgacttcactgaa
tccttgaagaagataaaacgcagtgtgagcccacaaaccttagaagcatacatacgttgg
aataaggactttggagataccactgtttaa
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