Suncus etruscus (white-toothed pygmy shrew): 126023914
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Entry
126023914 CDS
T09902
Symbol
NRXN1
Name
(RefSeq) neurexin-1 isoform X1
KO
K07377
neurexin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126023914 (NRXN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126023914 (NRXN1)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
126023914 (NRXN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
126023914
NCBI-ProteinID:
XP_049640259
LinkDB
All DBs
Position
12:complement(14906961..16069995)
Genome browser
AA seq
1557 aa
AA seq
DB search
MGTALLQRGGCVVLCLALLLGCWAELGTGLEFPGTEGQWTRFPKWNACCESELSFQLKTR
SARGLLLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLAEPPLNDGAWHHVRLGR
RFRNTTLRIDGAQAQWVEVRSKRRDMTVFSGLFIGGLPPELRAAALKLTLASVLEREPFR
GWIRDVRVNATPAQPVGSSADVRLDDEDEAPPHSGAGGGGGGGDAEGGGGGGGDGEGGGG
GGDGGGGGEGEGGGGGPCDASQDGGVCLNGGVCSVVDDQAVCDCSKTGFRGKDCSQEDNN
VEGLAHLMMGDQGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTG
KSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHA
MVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKN
NDVRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSIS
FDFRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKA
LQKKVNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPENKAGL
VFPTEVWTALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSRETAKPCLSNPC
KNNGMCRDGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFMKIQLPVVMHTEAEDVSLR
FRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLN
DNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGDHTRLEFHNIETGIITERRYLSSVPSNF
IGHLQSLTFNGMAYIDLCKNGDIDYCELNARFGFRNIIADPVTFKTKSSYVALATLQAYT
SMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKGYLHYVFDLGNGANLIKGSSNKPLND
NQWHNVMISRDTSNLHTVKIDTKTTTQITAGARNLDLKSDLYIGGVAKETYKSLPKLVHA
KEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGF
SCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDRPSTRADRLAIGFSTVQKEAVL
VRVDSSSGLGDYLELHIHQGKIGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNAT
LQVDSWPVIERYPAEYANGEQQEEKRSRSRNNDNERLAIARQRIPYRLGRVVDEWLLDKG
RQLTIFNSQATIIIGGKEQGQPFQGQLSGLYYNGLKVLNMAAENDANIIIVGNVRLVGEV
PSSMTTESTATAMQSEMSTSIMETTTTLATSTARRGKPPTKEPISQTTDDILVASAECPS
DDEDIDPCEPSSGGLANPTRAGGREPYPGPAEVIRESSSTTGMVVGIVAAAALCILILLY
AMYKYRNRDEGSYHVDESRNYISNSAQSNGTVVKEKQPSSAKSANKNKKNKDKEYYV
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atggggacggccttgctgcagcgcgggggctgtgtggtcctgtgcctggcgctgctgcta
ggctgctgggccgagctgggcaccggtctggagttcccgggcaccgagggccagtggacg
cgcttccccaagtggaacgcgtgctgcgagagcgagctgagcttccagctcaagacgcgc
agcgcgcgcgggttgctgctctacttcgacgacgagggcttctgcgacttcctcgagctc
atcctgactcggggcggccgcctgcagctcagcttctccatcttctgcgccgagcccgcc
acgctgctggccgagccgccgctcaacgacggcgcctggcaccatgtgcgcctgggtcgc
cggttccgcaacaccacgctgcgcatcgacggcgcccaggcccagtgggtggaggtgcgc
tccaagcggcgggacatgacggtcttcagcggcctcttcatcggggggctgccccccgag
ctgcgtgctgctgcgctcaagctcaccctggcttccgtgctggagcgagagccgttccgg
ggctggatccgggatgtgcgtgttaatgccacccccgcgcagcccgtgggcagcagcgcc
gatgtgcggctggacgacgaagacgaggcaccaccgcacagtggggccggaggaggagga
ggaggaggtgatgcagaaggaggaggaggaggtggaggcgatggagaaggaggaggtgga
ggtggcgatggaggaggaggaggagaaggagaaggaggtggaggaggcccctgcgatgca
tcccaggacggtggcgtgtgcctcaacggtggagtgtgctctgtagtggacgaccaggcc
gtgtgtgattgctccaagaccggcttccgcggcaaggactgcagccaagaagacaacaat
gtggaaggtctggcgcacctgatgatgggcgaccaaggaaaagaagaatacattgccaca
ttcaagggatctgaatacttctgctacgacttgtctcagaaccccattcaaagcagcagc
gatgaaataactctatcctttaaaactcttcagagaaatggactgatgcttcacactgga
aaatcggccgattatgtcaatcttgccttgaaaaatggagctgtctctctggtcattaat
ttgggatcaggggcctttgaagcactagtggagcccgtgaatggaaagtttaatgataat
gcctggcatgatgtgaaggtcaccaggaatctgcgtcagcactcaggcattggacacgct
atggtgacaatctcagtggacgggattcttaccaccacgggctacacgcaagaagattat
accatgctggggtctgatgactttttctatgttggaggcagccccagcacagctgacctg
cctgggtccccggtcagtaacaactttatgggctgtctcaaggaggtggtttataaaaat
aatgatgtgagactggaattatctcgacttgccaagcaaggagacccgaagatgaaaatc
catggggtggtggcgtttaaatgtgagaatgttgcaactctggaccctattacctttgaa
acccctgagtctttcatctctttgcctaaatggaatgctaagaaaacaggctccatttcc
tttgacttccgcaccacagagcccaatggcctcatcttatttagccatggcaaaccaagg
caccaaaaagatgccaagcacccacaaatgataaaagttgacttctttgctattgagatg
ctggatggccacctctacctcctcctggacatgggatcaggtaccatcaaaattaaagct
ctgcagaagaaggtgaatgatggagaatggtatcacgtggacttccaaagagacggacgg
tcaggtaccatttctgtcaataccctgcgtaccccctacactgctcctggggagagtgag
atcttggacctggacgatgagctgtacctgggagggctgccagagaacaaagccggcctt
gtcttccccactgaagtgtggactgcgctgctcaactatggctatgtgggctgcatccgg
gatttgttcattgatggtcagagcaaagatattcggcaaatggctgaagtccagagcact
gctggggtgaagccatcgtgttcaagggagaccgcaaagccgtgccttagcaacccatgc
aaaaacaatggcatgtgcagggatgggtggaatagatatgtctgcgattgttctggaaca
ggctaccttggccggtcctgtgagagagaagcaacagttctgagctatgatgggagcatg
ttcatgaagatccagctcccggtggtgatgcataccgaggctgaagatgtgtccttgcgc
ttccgttcccagcgtgcatatggcatccttatggccaccacctccagggactcggccgac
accctccggctggagctggatgctgggcgtgtcaaactgacggtcaacctagattgtatc
aggattaactgtaattccagcaaaggtccagagactctttttgctggctataacctcaat
gataatgaatggcacactgtgcgtgtggttcgtcgaggaaagagcttgaagctaaccgtg
gatgatcaacaggctatgacaggtcaaatggcaggtgatcatacaaggttggagtttcat
aatatcgagactggcatcatcacagaacgccgatatttgtcttctgttccatccaatttt
attggacacttgcagagtctaacgttcaatggaatggcatacattgacttgtgtaaaaat
ggcgacattgattattgtgaactcaatgccagatttggcttcaggaacatcatagcagac
cctgtcaccttcaagaccaaatccagctatgttgccttagctacattgcaagcctacacc
tctatgcacctttttttccagttcaagaccacatctctggatggactaattctgtacaac
agtggggatggcaatgattttattgtagttgaattagttaaagggtacttgcattacgtg
tttgatttggggaatggtgctaacctcatcaaaggaagctcaaacaaaccgctcaatgac
aatcagtggcacaatgtcatgatctccagggacaccagcaatctgcacaccgtcaagatc
gacacgaaaactaccacccagatcaccgcaggagccagaaacctagacctcaagagtgac
ttgtatatcggaggtgtcgccaaagaaacatacaaatccctgcccaaacttgtgcatgcc
aaggagggttttcagggctgcctggcatcagtcgacttgaatgggcgccttccagacctc
atctcggatgctcttttctgcaatggccaaattgagagaggatgtgaaggacccagcaca
acttgccaagaggactcttgctcaaaccagggtgtgtgcttgcagcaatgggatggcttc
agctgtgactgcagtatgacctccttcagtgggcctctgtgcaatgaccctgggacaacg
tatatctttagcaaaggtggtggacaaattacatataagtggcctcctaatgaccgtcca
agtacgcgagcagacagattggccattgggtttagcactgttcagaaagaagctgttttg
gtgcgagtggacagttcttcaggcctgggggattaccttgagctgcatatacaccaaggg
aaaattggagtaaaatttaatgttgggacggatgacatcgccattgaagagtccaatgcg
atcattaatgatggaaaataccatgtagtgcgtttcacgaggagtggtggcaatgctacc
ctccaggtggacagctggcctgtgatcgagcgctaccctgcagaatatgccaatggtgaa
caacaggaggagaaaagaagtcgatcaagaaacaatgataacgagcgcctggcgattgct
agacagcgaattccatatcgacttggtcgagtagttgatgaatggctactcgacaaaggg
cgtcagctcacaatcttcaatagccaagccaccataataattggcgggaaggaacagggc
cagcctttccagggccagctctctgggctctactacaatggcttgaaagttctgaatatg
gcagccgaaaatgatgccaacatcatcatagtgggcaatgtgagactggtcggtgaagtg
ccttcctctatgaccactgagtcgacagctactgccatgcaatccgagatgtccacctcg
attatggagaccaccacgaccctggcaaccagcacagctagaagaggaaaacctccgacg
aaagaacccatcagccagacgacagatgacatccttgtagcctctgcagagtgtcccagt
gacgatgaggacattgacccctgtgagccgagctcaggtgggttagcaaacccaacccga
gctggtgggcgagaaccctacccaggaccagctgaagttattcgggagtccagtagcacc
acgggcatggtggtgggcatcgtggctgcagccgccctgtgcattctcatcctgctctat
gccatgtacaaatacagaaatcgggatgaaggctcctaccatgtagacgagagcagaaac
tacatcagtaactcagcacagtccaatgggactgttgtcaaagaaaaacagcccagcagt
gcgaaaagcgccaacaaaaacaagaaaaacaaggataaagagtattacgtctga
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