Suncus etruscus (white-toothed pygmy shrew): 126023916
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Entry
126023916 CDS
T09902
Symbol
FN1
Name
(RefSeq) fibronectin
KO
K05717
fibronectin 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04810
Regulation of actin cytoskeleton
setr04820
Cytoskeleton in muscle cells
setr04933
AGE-RAGE signaling pathway in diabetic complications
setr05100
Bacterial invasion of epithelial cells
setr05135
Yersinia infection
setr05146
Amoebiasis
setr05165
Human papillomavirus infection
setr05200
Pathways in cancer
setr05205
Proteoglycans in cancer
setr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126023916 (FN1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126023916 (FN1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
126023916 (FN1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126023916 (FN1)
04810 Regulation of actin cytoskeleton
126023916 (FN1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126023916 (FN1)
05205 Proteoglycans in cancer
126023916 (FN1)
09162 Cancer: specific types
05222 Small cell lung cancer
126023916 (FN1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126023916 (FN1)
09171 Infectious disease: bacterial
05135 Yersinia infection
126023916 (FN1)
05100 Bacterial invasion of epithelial cells
126023916 (FN1)
09174 Infectious disease: parasitic
05146 Amoebiasis
126023916 (FN1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
126023916 (FN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126023916 (FN1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
setr04147
]
126023916 (FN1)
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126023916 (FN1)
04990 Domain-containing proteins not elsewhere classified [BR:
setr04990
]
126023916 (FN1)
Membrane trafficking [BR:
setr04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
ER-Golgi intermediate compartment (ERGIC) proteins
126023916 (FN1)
Exosome [BR:
setr04147
]
Exosomal proteins
Exosomal proteins of bladder cancer cells
126023916 (FN1)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
126023916 (FN1)
Domain-containing proteins not elsewhere classified [BR:
setr04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type I domain-containing proteins
126023916 (FN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
fn1
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
fn2
Fn3_Dep-1_2nd
NDNF
FN3_Tor_3rd
NDNF_C
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
126023916
NCBI-ProteinID:
XP_049640289
LinkDB
All DBs
Position
1:complement(31468377..31549284)
Genome browser
AA seq
2296 aa
AA seq
DB search
MLGGPGSGPMPLLLAVLCLGIAVPCQGALKTKRQTQQIIQPHFPMPAGPNKLGCYDNGKH
YQINQQWERTYLGNALVCTCYGGSRGFSCESKPEAEETCFDKYTGQTYRVGDTYERPKDS
MIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEWT
CKPIGEKCFEHSTGTSYAVGQTWEKPYQGWMMVDCTCLGEGSGRITCSSKNRCNDQDSRT
SYRIGDTWTKKDSRGNLLQCICTGNGRGEWKCERHTSMQTISRGTGSTENVHQTIYQPLP
PPQPVPFGHCASDSGVMYSVGMQWLKTQGSTQMLCTCLGNGVSCKETAAAQTYGGNSNGE
PCVLPFTYNGKTFYSCTTEGRQDGHLWCSTTSNYENDQKYSFCTDQTVLVQTRGGNSNGA
LCHFPFLYNNHNYTDCTTEGRRDNMKWCGTTMNYDADQMFGFCPMAAHEEVCTTSEGVMY
RIGDQWDKHHDMGHLMRCSCIGNGRGEWTCVAYSQLRDQCIVDDVTYNVNETFNKRHEEG
HMLNCTCFGQGRGRWKCDPIDQCQDSDTRTFYQIGDTWEKNVRGVRYQCTCHGRGIGEWL
CQPVNAYSGAPVPVQITIIESPGQSNAHPIQWNTPQSSHINQYILKWRPKSSRGRWKEAT
VPGHLNSYVIKGLKPGVIYEAQLISIQINGHREVTHFDFTTSGSGTGPTVNQNTVTGEST
PLPPMVDTSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGGEPQYLDLPSTASSVN
IPNLLPGRKYVVNVYEISEGGEQNLILSTSQTTAPDAPPNPTVDRVDDTSIVIRWSRPQA
PITGYRVIYSSSLEGSSTELNLPESATSVTLSDLEPGMPYNITIYAVEENQESTPIIIQQ
ETTGIPRKERLQPPRDLQFVEVTDTKITIMWMPSQTIATGYRVEVIPVNRTGDHGQRLPI
SRNLFAEVLELSPGVTYQFRVFAVYQNQESKPLVAEQTTKLDAPKDLQFTNEADSTVIVT
WTPPRAQISGYQLTTDLTRGGQLKNYNIPPSAKKYVLDNLQPGSEYTVSLTAVKDNQKSP
KVTGIFTAQQSLGSIPPYNTEVTGNSIIVTWAPAPKIGFKLNVWPSQGGESGREAVSESG
SIIVSGLTPGVEYTYSITPLKDGKEKDKPIVNKIVMPLSPPANLNLESNPNTGVLIVSWE
RSTTPDITGYRITTIPTNGKEGYSLEEMVHPDQSTCTFENLSPGLEYNVSVYTVKDDMES
APISDTITPAIPAPTDLKFTNIGPDTMRVTWAPPPSIDLSSFLVRYSPVKNEDDEAELTI
SPSNNAVVLTNLLPGTEYLVSVFSVYENHRSNPLRGRQKTGLDSASGIDFSDITANSFTV
HWIAPRAPITGYIIRHHPERSSGRPREDRVPPSRNSITLTNLLPGTEYIVSIIALYGREQ
SVPLVGQQSTVSDVPTNLEVIAATPTSLLISWDAPPVTVRYYRITYGETGGSSPVQEFTV
PGTKSTATINGVNPGVDYTITVYAVTGRGDSPASSQPVQINYRTEIDKPSKMQVTNVQDS
AISIKWLPSSSPVTKYRVTLVPKDGSGPVKTINARPDQTEITVEGLQPAVEYVINVYAQN
QNGESEPLVETAVTTIPAPSNLRFSQVTPTSLTAQWTPPNIKLTGYRVQVTPKEKTGPMK
EINLAPQSSSVIVSGLMVGTKYEVSVSALKDSLTSRPALGVVTTLENVSPPRRARVTDAT
ETTITISWRTKTETITGFHVEAIPTNSQTPVQRTISSGVRSYTITGLQPGTDYKIYLYTL
NENARSTPVIFDASTAIDAPSNLHFLATTPNSLLLSWHPPQAKITGYIIKYEKPGSPPRE
VFPRPRPEVTEATITGLEPGTEYMIQIIAIRNNQKSEPLIGRKRTDELPQLVTLPRPNHH
GPEILDVPSTVQKITLNNGPGYNNGDGLQFPGTSDHLNHIEQQTIFEEHGSRRRTTPTMA
TPQRHRPRPYPPNVDLVPGGDLDRQFYPDRVGHNHNASVGQEALSQTTISWNPLPASSEY
IISCNPISTDEEPLQFRVPGTSTSATLTGLTRGATYNIKVEALQGQRRNKIREETITVGN
IVDQSAFPGTDDSCFDPYTVSYYAVGEEWERLSDSGFKLSCQCLGLGSGHFRCDSSKWCH
DNGMNYRIGEKWDRTGDNGQKMTCTCLGNGKGEFKCDPDETTCYDDGKIYRVREQWQKEY
LGAICSCTCFGGKRGWRCDNCHRPGAIEVGSEGSPGYSPNRYLDNYDRNTNTKNVNCPIE
CFMPLDVQADRDDSRE
NT seq
6891 nt
NT seq
+upstream
nt +downstream
nt
atgctcgggggtccgggctctgggccgatgccgctgctgctggctgtcctgtgcctgggg
atagcggtgccctgccaaggagccttgaagaccaagaggcagacccagcagatcattcag
ccgcatttccctatgcctgcgggtccgaacaagcttggctgttacgataatggaaagcat
taccagataaaccaacaatgggagcgcacttacctgggcaatgcgttggtgtgtacttgt
tatggaggaagccgaggctttagctgcgagagcaagcctgaagctgaagagacttgcttt
gacaagtacactgggcagacttatcgagtgggtgacacttacgagcgcccgaaagacagc
atgatctgggactgtacctgcatcggggctgggcgagggagaataagctgcaccattgca
aaccgctgccatgaagggggtcagtcctacaagatcggtgacacctggaggaggccacat
gagactggaggttacatgttagagtgtgtttgtctcgggaatgggaaaggagaatggacc
tgtaagcccataggtgagaaatgttttgagcactctactgggacttcctatgctgttgga
caaacctgggaaaagccctaccaaggctggatgatggtggattgtacttgtctgggagaa
ggcagtggacggatcacctgcagttcaaaaaatcgatgcaatgaccaggacagtagaact
tcctatcgaattggagatacctggaccaagaaagatagccgaggaaaccttctgcagtgc
atctgcacgggcaatggcagaggggagtggaaatgtgagaggcatacctctatgcagacc
atatccagaggaacaggttccacagaaaatgtccatcagaccatttaccagccgctacct
cccccgcagccagttccatttgggcactgtgcctctgacagtggtgtgatgtactcagtg
ggcatgcagtggctgaagacacaaggaagcacacaaatgctttgcacttgcttgggcaat
ggagtcagctgcaaggagacagctgcagcccaaacttatggtggaaattcaaatggggag
ccatgtgtcttgccattcacctataatggcaaaactttctactcctgcactacagaaggg
cgacaggatggacatctctggtgcagtaccacttctaattatgaaaatgaccagaaatac
tctttttgtaccgatcaaactgttttggtccagactcgaggtggaaattccaatggtgcc
ctatgccacttccccttcttatacaataatcacaactatactgactgcactactgaaggc
agaagagacaacatgaagtggtgcggaaccaccatgaactatgatgcagaccagatgttt
ggattctgccccatggctgctcatgaggaagtctgtaccaccagcgaaggggtgatgtat
cgcattggagaccagtgggataagcatcatgacatgggccacttgatgagatgctcatgt
attggaaatggtcgtggggaatggacctgtgttgcctactcgcagcttcgagatcaatgc
attgttgatgacgtcacttacaacgtaaatgaaaccttcaataagcgtcatgaagagggg
catatgctgaactgtacttgctttggccagggtcggggcagatggaaatgtgatcctatt
gaccagtgtcaagattcagataccagaacattttatcagattggagacacatgggaaaaa
aatgtgcgtggtgtccgataccagtgtacctgccatgggcgtggcattggagagtggctt
tgtcagcctgtaaatgcctactcaggtgcacctgttcctgtccaaataacaatcattgag
agtccgggtcagtccaacgctcaccccatccagtggaatacaccacagtcatctcacatt
aaccagtacattctcaaatggaggcctaaaagtagtcgcggtcgttggaaggaagccacc
gtcccaggccacttaaactcatacgtcatcaaaggcctgaagccaggagtcatctatgaa
gcgcaactcatcagtatccagataaatggccacagagaagtgacacatttcgacttcacc
acctccggcagtggcactggcccaaccgtgaatcaaaacacggtgacaggtgaaagcaca
cctctccctcccatggtggacacttcggagtcagtgactgaaatcacatccaacagcttt
gtagtctcatgggtgtcagcttcagatactgtgtcaggattccgtgtggaatatgaactg
agcgaggagggcggtgaaccccagtacttggatctcccaagcacagctagctctgtgaac
atccctaacctgcttcctggtcgaaagtacgtcgtcaatgtctatgagatatcagaaggg
ggagagcagaatttgatcttatctacctcacagaccacagcacctgatgccccaccaaac
cctacagtggacagagtggatgacacctcaattgttattcgctggagtcgaccccaggca
cccatcacaggttacagagtcatctattcctcttcactggaaggaagtagtacagaactc
aaccttcctgagagtgccacttcagtgactctcagtgatttggagccagggatgccttat
aacatcactatctacgctgtggaagaaaatcaagagagcactcctatcatcatccagcaa
gaaaccacgggcattcctcggaaagagagacttcagccacctcgggatctgcagtttgtg
gaagtgacagatacaaagatcaccatcatgtggatgccctcgcagactatagcgactggt
tatcgcgtggaggtgatccctgtcaacaggactggggatcatggacagaggctgcccatc
agcagaaacctttttgcagaagtccttgagctatcaccaggcgtcacttatcaattcaga
gtcttcgctgtgtaccaaaatcaggagagcaaaccgctggttgctgagcagaccaccaaa
ttggatgctcccaaggacctccagtttaccaatgaagctgactctacagtcatagtgacc
tggacaccccctcgagctcagatttctgggtaccaactgacaacagacttgactcgagga
ggtcaactcaagaactataatataccaccatctgccaagaagtatgtgctggataatctt
caaccagggtctgagtacactgttagcctaacagctgtaaaagacaatcagaagagtccc
aaagtcactggcatctttactgctcagcagtctcttggctccattccaccttacaacaca
gaagtcactggaaactccattattgttacatgggcacctgctccaaagattggttttaag
ctaaatgtctggccaagccagggaggtgaatcaggacgagaagcagtttctgaatccggc
agcatcatagtgtctggtctgactccaggcgtggaatacacttactccatcacacccctg
aaagatgggaaagagaaagacaaacccattgtcaataaaatagtgatgccattgtctcct
ccggcaaacttaaatctggagtcaaaccccaacactggtgtgcttatagtgtcttgggag
aggagcaccactcccgacattactggctatagaattacgaccattcctacaaatggcaag
gagggatattctttggaagaaatggtccatccagatcagagtacctgcacttttgaaaac
ctgagtcctggcttggagtacaatgtcagtgtttacactgtcaaggatgacatggaaagt
gcccctatatctgataccatcactccagctatccctgctcccactgacttgaaattcacc
aacattggtccagacactatgcgtgttacatgggccccacctccatccattgatttgtcc
agcttcctggttcgctactcacctgtgaaaaatgaggacgatgaggcagagttgactata
tctccttcgaataatgctgtggtcttaacaaatctcctgcctggcacagaatatttagtc
agtgtcttcagtgtttatgaaaatcaccggagcaatcctctccgaggaagacagaaaaca
ggtcttgattctgcaagtggcattgacttttctgatatcactgccaactccttcactgtc
cattggattgctcctcgagctcccataactggttacataattcgacatcatcctgagcgc
tccagtggaagaccccgagaagaccgagtgcccccttctcgcaattccatcactctcacc
aacctccttccaggcacagaatatattgtcagcatcattgctctctatggcagagagcaa
agtgttcctttggttggtcaacaatcaacagtttctgatgttccaactaacttggaagtt
attgccgccacccccaccagcctactgatcagctgggacgcaccaccagtcaccgtgaga
tactacaggatcacttatggagaaacaggaggaagtagccctgttcaggagttcactgtg
cctggaaccaagagtacagctaccatcaatggtgttaatcctggagttgactataccatc
actgtttatgctgtcactggccgtggtgacagccctgcaagcagccagccagttcaaata
aattacagaacagaaattgacaaaccatccaagatgcaagtgaccaatgttcaggactct
gcaattagtatcaaatggttaccttcaagttcccctgtgactaaatacagagtcaccctt
gtgcccaaagatggctcaggacctgtgaaaaccataaatgcacgtccagatcaaacagaa
attactgttgaaggcttgcagcctgcagttgaatatgtgattaatgtctatgcacagaat
caaaatggagaaagcgagcccttggttgagactgcagtaaccaccattcccgctccaagc
aatctgaggttctctcaggttacacctacaagcttgactgcccagtggacaccacccaac
attaaactcactggatatcgagtgcaggtgacccccaaggagaaaacaggaccaatgaaa
gaaatcaaccttgctccacagagttcttctgtgattgtgtcaggactcatggtgggcacc
aaatatgaagtgagtgtctctgctcttaaggactctttgacaagcagaccagctctggga
gttgtcactactctggagaatgtcagtcctcccagaagggcccgtgtgacagatgctact
gagaccaccatcaccattagctggagaactaagactgagaccatcactggcttccatgtt
gaagccatcccaacaaacagccagactccagttcagaggaccataagttcaggtgtcaga
agttacaccatcacaggtttacagcctggtactgactacaagatctacctgtacaccctg
aatgaaaatgcccggagcacccctgtgatctttgatgcctccactgccatcgatgcccca
tccaacttgcatttcctggccaccacacccaactccttgctgctgtcttggcaccctcca
caggccaagattactggctacatcatcaagtatgagaaacctggttcacctcccagagaa
gtgttccctagaccacggcctgaagtcacagaagctactattactggtctggagccagga
acagagtacatgattcaaatcatagccatcagaaataatcagaagagtgaacctctgatt
gggaggaaaaggacagatgagcttccccaactggtaaccctcccacgtcccaatcatcac
ggaccagaaatattggatgttccttccacagttcaaaaaatcactttgaacaatgggcct
gggtataataatggagatggtttacaatttcctggcacttctgatcacctcaaccacatt
gagcaacaaactatctttgaggagcatggttctaggcggagaacaacacccactatggcc
acccctcaaagacataggccaagaccgtatccacctaatgtagatctcgtacctggggga
gacttagaccgccaattctatcctgatcgtgttggacacaatcacaatgcatctgtggga
caagaagctctctctcagacaaccatctcctggaaccccctcccggcttcttctgaatat
atcatttcatgcaatccaattagcactgatgaagaaccgctacagttcagagttcctgga
acctctactagcgccaccttgacaggacttaccagaggggccacctataacatcaaagta
gaggcactacaaggccagagaagaaataagattcgagaggagactattactgtgggcaat
attgtagaccaaagtgcattcccggggacggatgactcgtgctttgatccctacacggtt
tcctattatgcagttggagaggagtgggagcgactgtctgattctggctttaaactctcg
tgccagtgcttaggccttggcagtggtcatttcagatgtgactcatctaaatggtgccat
gacaatggcatgaactacaggatcggagagaagtgggatcgcactggagataatggtcag
aaaatgacctgtacctgtcttggaaatggaaaaggcgaattcaaatgtgatcctgatgag
acaacatgttatgatgatgggaagatataccgtgtaagagaacagtggcagaaggaatat
cttggtgctatctgctcctgcacgtgctttggaggcaagcggggctggcgctgtgacaac
tgccacagacccggggcaattgaagtaggcagtgaagggtctcctggctactccccaaat
cggtacttggataattatgaccgcaacaccaatactaaaaatgtcaactgcccaattgag
tgcttcatgcctttagatgtacaggctgacagagatgattcccgagagtag
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integrated database retrieval system
