Suncus etruscus (white-toothed pygmy shrew): 126023917
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Entry
126023917 CDS
T09902
Symbol
DCTN1
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04814
Motor proteins
setr04962
Vasopressin-regulated water reabsorption
setr05014
Amyotrophic lateral sclerosis
setr05016
Huntington disease
setr05022
Pathways of neurodegeneration - multiple diseases
setr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
126023917 (DCTN1)
09150 Organismal Systems
09155 Excretory system
04962 Vasopressin-regulated water reabsorption
126023917 (DCTN1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126023917 (DCTN1)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126023917 (DCTN1)
05016 Huntington disease
126023917 (DCTN1)
05022 Pathways of neurodegeneration - multiple diseases
126023917 (DCTN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126023917 (DCTN1)
03036 Chromosome and associated proteins [BR:
setr03036
]
126023917 (DCTN1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
setr04812
]
126023917 (DCTN1)
Membrane trafficking [BR:
setr04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126023917 (DCTN1)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
126023917 (DCTN1)
Cytoskeleton proteins [BR:
setr04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
126023917 (DCTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
TMF_DNA_bd
DUF7259
Motif
Other DBs
NCBI-GeneID:
126023917
NCBI-ProteinID:
XP_049640287
LinkDB
All DBs
Position
12:10722151..10745951
Genome browser
AA seq
1276 aa
AA seq
DB search
MAQSRRHAAPRTQGGSRMSAEASGRPLRVGSRVEVIGKGHRGTVAYVGATLFATGKWVGV
ILDEAKGKNDGTVQGRKYFTCDEGHGIFVRQSQIQVFEDGADTTSPETPDSSASKVLKRE
GSDSAAKTSKLRGMKPKKAPAARKTTARRPKSTRPASTGVAGASSSLGPSGSASAGELSS
SEPSTPAQTPLAAPIIPSPALTSPSTTAPLPSPSKEEEGLRAQVRDLEEKLETLRLKRAE
DKAKLKELEKHKIQLEQVQEWKSKMQEQQADLQRRLKEARKEAKEALEAKERYMEEMADT
ADAIEMATLDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQL
KQLEEQNARLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVVRQQRERLQEELAQAE
GTIDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELRETVGDLEAMNEMNDELQENARE
TELELREQLDMAGARVREAQKRVEAAQETVADYQQTIKKYRQLTAHLQDVNRELTNQQEA
SVERQQQPPPETFDFKIKFAETKAHAKAIEMELRQMEVAQANRHMSLLTAFMPDSFLRPG
GDHDCVLVLLLMPRLICKAELIRKQAQEKFELSENCSERPGLRSAAGEQLSFAAGLVYSL
SLLQATLHRYEHALTQCSVDVYKKVGSLYPEMSAHERSLDFLIELLHKDQLDETVNVEPL
TKAIKYYQHLFSIHLAEQPEDSTMQLADHIKFTQSALDCMSVEVGRLRAFLQGGQEASDI
ALLLRDLDTSCSDIRQFCKKIRRRMPGTDAPGIPAALAFGPQVSDTLLDCRKHLTWVVAV
LQEVAAAAAQLIAPLAENEGLPVAALEELAFKASEQIYGTPSSTPYACLRQSCTILISTM
NKLATAMQEGEYDAERPPSKPPPVELRAAALRAEITDAEGLGLKLEDRETVIKELKKSLK
IKGEELSEANVRLSLLERKLDSAAKDADERMERVQARLTETQALLRKKEKEFEETMDTLQ
ADIDQLEAEKAELKQRLSSQSKRMVEGLRGTPPSGIATLVSGIAGEEQQRGGAAGQAPGP
GMVKDSPLLLQQVSALRLHLAQLQHENSVLKGAQMKASLAALPPLHVAKLSLPQEGPDTK
LGTGALYRKTNQLLETLNRLSVHTHVVDITRASPAAKSPSAQLLEQVAQLESLSDTIEKL
KDEVLKETVSQRPGAMVPTDFATFPSTAFLRAKEEQREDTVYVGKVTFPCTAGLGQRHRL
VLTQEQLHQLHGRLIS
NT seq
3831 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagcaggcggcacgcggccccccggacgcaaggcggcagcaggatgagtgcg
gaggccagcggccggcccctgcgggtgggctcccgagtggaggtgattgggaaaggccac
cgaggcactgtggcctatgttggcgccaccctctttgccactggcaagtgggtaggtgtg
atcctagacgaagccaagggcaagaacgacgggactgtccagggccggaagtacttcacg
tgcgatgaggggcatggcatcttcgtgcgccagtctcagatccaggtgtttgaagatgga
gcagatactacatccccagagacaccggattcttctgcctctaaggtcctcaagagagag
ggaagtgattcagctgcaaagaccagcaaactgcggggaatgaagcctaagaaggccccg
gcagcccgaaagaccacagctcggcggcccaagtccactcgtccagccagcaccggggtg
gctggagccagcagctccctggggccctctggctctgcatcagcaggagaactgagcagc
agcgagcccagcaccccagcacagacgcctctggccgccccgatcattccctcaccggcc
ctcacctctcccagcaccacagcccctctcccttccccgtccaaggaggaggagggcctg
agggctcaggtgcgagacctggaggaaaagctggaaacgctgcgtctgaagcgggcggaa
gacaaggccaagttgaaggagctggagaagcacaagatccagctggagcaggtgcaggaa
tggaagagcaagatgcaggaacagcaggcagacctgcagcggcgcctaaaggaggcgaga
aaggaagccaaggaagcactggaggccaaggagcgctacatggaggagatggctgacacg
gccgacgccattgaaatggccacgctggacaaggaaatggccgaggagcgtgcagagtcc
ctgcagcaggaggtggaggcactcaaggagcgtgtggatgagctcaccacggacctggag
atcctcaaggccgagattgaagagaaaggctcagacggggcagcatccagctaccagctc
aagcagctcgaggaacagaatgcccgcctcaaggacgccctcgtgcggatgcgggatctg
tcttcctctgagaagcaggagcatgtgaaactgcagaagctcatggaaaagaaaaaccag
gagctggaggtcgtgcggcagcagcgggaacgcctacaggaggagctggcccaggctgag
ggcaccatcgatgagctgaaggagcaggtggacgctgcgctgggtgcggaggagatggtg
gagatgctcacggaccggaacctgaatctggaagaaaaagtccgggaattgagagagact
gtgggggacctggaagccatgaacgagatgaacgatgagctgcaggagaacgctcgagag
accgagctggagctgcgtgagcagctggacatggcaggcgctcgggtgcgcgaggcccag
aagcgggtggaagcggcccaggagacggtggctgactatcagcagaccattaagaagtac
cgccagctcacggcccatctgcaggatgtgaatcgggaactgacgaaccagcaggaagca
tcagtagagaggcagcagcagccgcctccagagacttttgacttcaagattaagtttgcc
gagacgaaggcccatgccaaggccatcgagatggagctgaggcagatggaggtcgcccag
gccaaccgacacatgtccctgctgacagccttcatgccagacagcttccttcgtccgggt
ggggaccacgattgcgtcctggtgctgctcctcatgccccgtctcatctgcaaggctgag
ctaatcagaaagcaggcccaggagaagtttgagttgagcgagaattgttccgagcgaccg
gggctgcgcagtgctgcaggagaacagctgagctttgctgcggggctggtgtattcactg
agtctgctgcaagccacgctccaccgctatgagcatgccctcactcagtgcagtgtggat
gtgtacaagaaggtgggcagcctgtaccccgagatgagcgcccacgagcgctccctggac
ttcctcatcgagctgctgcataaggaccagctggatgagaccgtcaatgtggagcctctc
accaaggccatcaagtactatcagcacctattcagcatccaccttgccgagcagcccgag
gacagcacaatgcagctggctgaccacatcaagttcacccagagtgccctggactgcatg
agtgtggaggtgggccggctgcgagccttcctgcagggtgggcaggaggcctcagatatt
gccctactgctccgggacctggacacatcttgtagtgacatccgccagttctgcaagaag
atccgcaggcgcatgccaggaactgatgcacctgggattcctgctgccctggcctttggg
ccacaggtgtccgacaccctcctggactgcaggaagcacctgacgtgggtggtggctgtg
ctgcaggaggtggcggctgctgccgctcagcttattgccccactggcagagaacgagggc
ctacctgtggctgctctggaggagttggctttcaaagccagtgagcagatctacgggacg
ccgtccagcaccccctatgcctgcctgcgccagtcatgtaccatcctcatcagcaccatg
aacaagctggccacagccatgcaggagggcgagtacgatgctgagcggccccccagcaag
ccacccccggtggagctgcgggccgcagccctgcgggcagaaatcacagatgccgagggc
ttgggcttgaagctggaagatcgagagactgtgatcaaggagttgaagaagtcgctcaag
ataaagggtgaggagttgagcgaggccaatgtgcggctgagcttgctggagaggaagctg
gacagtgctgccaaggatgccgacgagcgcatggagagagtgcaggcacggctgacggag
acgcaggcgctgctgcggaagaaggagaaggaattcgaggagaccatggacacgctccag
gcagacatcgatcagctggaggccgagaaggcagagctgaagcagcggctgagcagccaa
tctaagcgtatggtcgaggggcttcggggcaccccaccctccggcatagccaccctggtt
tccggcattgccggtgaagaacagcagcgaggaggtgctgctgggcaggccccgggcccc
gggatggtgaaagactcaccgctgctgctccagcaggtctcagccctgcggctgcacctg
gcccagctgcagcatgagaacagcgtcctcaagggggcccagatgaaggcttctctggca
gcgctgccccctctgcacgtggccaagctatcactgccacaggagggccctgacaccaag
ctgggtactggagccctgtaccgcaagaccaaccagctcctggaaactctgaaccggctt
agtgtgcacacacatgttgtggacatcacacgtgccagcccagccgccaagagcccatcg
gcccagctcctggagcaggtggctcagctcgagtccctcagcgacaccattgagaagctc
aaggatgaagtcctcaaggagacagtgtcgcagcgtcctggagccatggtccccacagac
tttgccacttttccttccacggccttcctcagggccaaggaggagcagcgggaagacaca
gtctacgtgggcaaagtgaccttcccgtgtacagccggccttgggcagcggcatcggctg
gtgctgacccaggaacagctgcatcaactccatggccgcctcatctcctga
DBGET
integrated database retrieval system
