Suncus etruscus (white-toothed pygmy shrew): 126023966
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Entry
126023966 CDS
T09902
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
126023966 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126023966 (POLR1B)
Enzymes [BR:
setr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
126023966 (POLR1B)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
126023966 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
126023966
NCBI-ProteinID:
XP_049640350
LinkDB
All DBs
Position
12:complement(61762694..61790146)
Genome browser
AA seq
1135 aa
AA seq
DB search
MESAGRWRSLPGGPSLKHLTDPSYAIPRKQQKPALQELTRAHVESFNYAVSEGLGHAVQA
IPPFEFAFKDERISLTILDAVITPPTVPKGSICREFNVFPAECRGRRSSYRGKLTADISW
AVNGISKGVIKQFLGSVPIMVKSKLCNLHGLPPKALIEHHEEPEEMGGYFIINGIEKVIR
MLIMPRRNFPVAMIRPKWKSRGPGYTQYGVSMRSVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFVLKALVSFSDYQIFQELIKGKEDDSFLKNSVSQMLRIVMEEGCATQKQV
LSYLGERFRVKLSLPDWYSNEQAAEFLFDQCICIHLKSCTEKFYMLCFMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLYLMFLKEKMEAWLVSIKIALDKRAQKTNVSINTENLMKIL
NMGTDLTKPFEYLLATGNLRSKTGLGFLQDSGLCVVADKLNFIRYVSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPALLCNLGVT
PVDGAPHRPYSECYPVLLDGVLVGWADKELAPGIAESLRHFKVLREKRIPPWLEVALIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLELGKEELIGTMEQLFMNIAIFEDEILPGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPYMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDDSLVFGVKPGDPRVLQKLDDDGLPFIGAQLQYGDPYYSYLNLNTGESYVVY
YKSKENCVVDNIKVCSNDSGSARFKCVCVTVRVPRNPTIGDKFASRHGQKGILSRLWPVE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFTFSEDNSALG
YFGEMLKAAGYNFYGTERLYSGVSGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDK
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVTCGSLLSPL
LEKPPPAWSALRNRKYTCTVCARSDTVDTISVPYVFRYFVAELAAMNIKVKLDVV
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atggagtctgcgggtcgctggcggagcctgcctggcgggccgagcctgaagcatttgacc
gacccttcgtacgcgatcccaaggaagcagcaaaagccggcgctgcaggagctgacgcgg
gcgcacgtggagtccttcaactacgccgtgagcgaggggctcggccacgcggtgcaggct
atcccgcctttcgaatttgccttcaaagatgaacgtatttccctcacaattttggatgct
gtcatcactccgcctacagttcccaaagggagcatctgcagagaattcaatgtcttccca
gcggaatgtcggggccgacggagttcctacaggggaaagttgacagctgatatcagctgg
gcagtgaatggaatctccaaaggagtcattaagcaattccttggttctgttcccatcatg
gtgaagtccaagctttgcaacttgcatggccttcctccaaaagccctcattgagcatcac
gaggaacctgaggaaatgggaggctactttatcatcaatggcattgagaaagtcattcga
atgctaattatgcctagaaggaatttccctgttgccatgataagaccaaaatggaaaagc
agaggccctggctacacgcaatatggcgtttccatgcgctccgtgagggaagaacattct
gcggtcaatatgaacctgcactacttggagaacggcacagttatgttgaactttatctac
cggaaggagctgttttttcttcccttgggatttgtgcttaaggcactcgtcagcttttct
gactatcagatatttcaggagctcatcaaagggaaggaggacgactcgttcctcaagaat
tctgtctcccagatgctgaggatcgtaatggaagagggctgtgccacacagaagcaggtc
ctcagctacctgggcgagcgcttccgagtgaaactcagcctcccggactggtattcaaat
gagcaggctgcagagttcctgtttgatcagtgcatctgtattcacctgaaatcctgtact
gaaaagttttacatgctttgtttcatgacacggaagctctttgctttagccaaaggagaa
tgcatggaggacaatcctgacagtttagtgaatcaagaggtccttacaccaggacagctt
tacctcatgtttctgaaggaaaaaatggaagcttggttggtatcaattaaaatagctcta
gacaaaagggctcagaaaactaatgtctccataaataccgaaaacttgatgaagatttta
aatatgggaacagatctaacgaaaccatttgaatatcttcttgccactgggaatctacgt
tctaaaacaggtcttggcttcctgcaagattctggactctgtgttgtggctgacaagctg
aacttcatccgctatgtctcccattttcgctgtgtgcacagaggggctgattttgccaag
atgaggaccaccacggtgcgcagactgttgcctgagtcctggggtttcctgtgtcctgtg
cacaccccagatggggagccctgtggtctgatgaaccacttaactgccgtgtgtgaggtg
gtgacacagtttgtctatacagcttcaattccagctttgctctgcaacttgggggtcact
cctgtggatggagcgccacatcggccctacagcgagtgctatcccgtgcttctcgatggt
gtcctggtgggctgggcggacaaggagctggctccgggcatcgcagagtctctccgacac
ttcaaggtgttgagagaaaagagaattcctccctggctggaagtggccctcattcccatg
actggaaaaccaagtctctaccccggattgttcctttttaccactccttgcagactggta
cggcctgtgcagaacttggaattggggaaagaggaactaattggaactatggaacagctc
ttcatgaacattgccatctttgaggatgagattcttcctggagtcaccacccaccaggag
ctcttcccgcacagcctgttaagtgtcatcgccaactttatacctttctctgaccacaac
cagagtccacggaacatgtaccagtgtcagatgggtaaacaaacgatgggctttcccctt
ctcacttatcaggatcgatcagataacaaactgtatcgtcttcagactccacaaagccct
ttagtgagaccatacatgtacgattactatgacatggataactatccaattgggacaaat
gccatcgttgctgttatttcttacactggctatgatatggaagatgctatgattgtgaat
aaggcctcctgggaacgaggatttgcccatggaagtgtctacaagtctgaattcatagat
ctctctgaaaagattaaacagggagatgacagtctggtgttcggagtcaagcctggagac
ccacgtgttttgcagaagttagatgatgatggcttacctttcatcggagcccagctgcag
tatggagacccgtattatagctacctaaacctcaacactggcgaaagctatgtggtgtac
tataagagtaaagaaaattgtgttgtggacaacatcaaagtatgcagcaacgacagcggc
agtgccaggttcaagtgtgtctgcgtcacagtgcgggtgccccggaacccgaccatcggc
gacaagttcgctagccgccacggtcagaagggcatcctgagccgcctgtggcccgtggag
gacatgcccttcacggagagcgggatggtgccagacattctcttcaacccgcacgggttt
ccctcccgcatgaccatcggcatgttgatcgagagcatggcaggcaagtcggctgcgctg
catgggctctgccacgacgccaccccctttaccttctccgaggacaactcggccttgggc
tactttggagagatgctgaaggcggccgggtacaacttctatggcactgagcgcctctac
agcggtgtcagtgggctggagctggaggccgacatcttcattggcgtggtgtattaccag
cgcctgcgccacatggtctccgacaagttccaggtccggaccacgggcgccagagacaaa
gtcaccaaccagcccatcggcgggagaaacgtccagggcggcattcgcttcggggaaatg
gagcgggacgcgctgctcgcccacgggacctccttcctcctgcacgatcgcctcttcaac
tgctcggaccgttccgtggcccatgtgtgcgtgacctgcgggagtctcctctcgcccctg
ctcgagaagccgcccccggcctggtccgccctgcgcaaccgcaagtacacctgcaccgtg
tgtgcccgcagcgacaccgtcgacaccatctccgtgccctatgtgttccgctattttgtg
gccgagctggctgccatgaacatcaaagtgaagctggacgtcgtctag
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