Suncus etruscus (white-toothed pygmy shrew): 126024143
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Entry
126024143 CDS
T09902
Symbol
FANCL
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03460
Fanconi anemia pathway
setr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126024143 (FANCL)
09124 Replication and repair
03460 Fanconi anemia pathway
126024143 (FANCL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126024143 (FANCL)
03400 DNA repair and recombination proteins [BR:
setr03400
]
126024143 (FANCL)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126024143 (FANCL)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126024143 (FANCL)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
126024143 (FANCL)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_C
FANCL_d1
FANCL_d2
zf-RING_2
SLX1_C
T4-Gluco-transf
zf-HC5HC2H
zf-RING-like
zf-rbx1
PHD_NSD
Motif
Other DBs
NCBI-GeneID:
126024143
NCBI-ProteinID:
XP_049640543
LinkDB
All DBs
Position
12:37020367..37112815
Genome browser
AA seq
388 aa
AA seq
DB search
MESDAELLRQFPLLVPQNWAKTVYEGFISAQGRDFHIKILLPEDLQLKNARLLCSWQLRT
ILSGYHQIIQQRMQHSPDLLSFMMELKMVLEVALKNKQEFSILPTPQFYSSVTQEIEVLG
WDKLVYVDSSFSTIKLKAVDDSGRQHLITLKLKPKYPAESPDCFVDFPVPFSLSWTPQVT
DQPKLHTKIAILPSSLISIHNQFSSALESLKAFWDVMDEIDEKTWVLEPEKPTRSAKARR
IVLGHNASLNIEVDPRHPTMLPECCFLGADHVTKPLGIKLSRNIHLWDTENTVLQNLKDV
LEIDFPARTVLEKSDFSMDCGICYAYQLDGAIPDQVCDNSQCGQPFHQICLYEWLRGLPT
VRQSFNIIFGECPYCSKPITLKISGRKP
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggatgcggagctgttgcgccagttcccgctccttgtgccccagaactgggcc
aaaacggtgtatgagggattcatttcggctcagggaagagatttccacattaaaatcttg
ttgcctgaagatttacaactaaaaaatgcaagattactatgcagttggcagttgagaaca
atacttagtggatatcatcaaataatacaacagagaatgcaacactctcctgatctactg
agctttatgatggagttgaagatggtcctggaagttgctttaaagaacaagcaagagttc
tctatcctacctactccacagttctactcaagtgttacccaagaaatagaagttctgggt
tgggataaacttgtttatgtggattcttccttcagtaccatcaagttaaaagctgtagat
gattctggtagacagcatctaatcactctcaaattgaagccgaagtaccctgcagaatcg
ccagattgttttgttgattttcctgtccctttttctctttcttggacaccacaggtcact
gaccaacccaaactgcatacaaaaattgcaattttaccaagttccttaataagtattcac
aatcagttttcatcagcattagaatcactgaaggcattctgggatgttatggatgaaatt
gatgagaagacttgggtacttgagccagaaaaaccaacacggagtgcaaaagcacggagg
attgtcttagggcataatgcttcattaaacattgaggtagaccctaggcatcctactatg
cttcctgaatgctgctttcttggcgctgatcatgtgacaaaacctttgggaatcaagttg
agcagaaacatacacttatgggatacagaaaatactgtgttacaaaatttgaaagatgtt
ttagaaatcgattttccagctcgtactgtcttggaaaaatcggatttttctatggattgt
ggaatttgttatgcctatcaacttgatggtgccattcctgatcaagtatgtgataattca
cagtgtggacaacctttccatcaaatatgcttatatgagtggttgagaggactgccaact
gtcagacagagttttaacatcatatttggtgaatgtccctattgtagtaagccaattacc
ttgaaaatatctgggaggaaaccctaa
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