Suncus etruscus (white-toothed pygmy shrew): 126024355
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Entry
126024355 CDS
T09902
Symbol
OTX1
Name
(RefSeq) homeobox protein OTX1 isoform X1
KO
K09326
homeobox protein OTX1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
126024355 (OTX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126024355 (OTX1)
Transcription factors [BR:
setr03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
126024355 (OTX1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TF_Otx
Homeodomain
Homeobox_KN
GIP4
SatD
Motif
Other DBs
NCBI-GeneID:
126024355
NCBI-ProteinID:
XP_049640706
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All DBs
Position
12:complement(31991755..31995173)
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AA seq
355 aa
AA seq
DB search
MMSYLKQPPYGMNGLGLAGPAMDLLHPSVGYPATPRKQRRERTTFTRSQLDVLEALFAKT
RYPDIFMREEVALKINLPESRVQVWFKNRRAKCRQQQQSGSGTKSRPAKKKSSPVRESSG
SESSGQFTPPAVSSSASSSSSASSASANPAVAAAAGLSGNPAVAVPSSLSAPAASSIWSP
ASISPSSAPASVSVPEPLAAPSNASCMQRSVAAGAASAAASYPMSYGQGGSYGQGYPAPS
SSYFGGVDCSSYLAPMHSHHHPHQLSPMAPSSMAGHHHHHPHAHHPLSQSSGHHHHHHHH
HHQGYGGSGLAFNSADCLDYKEPGAAAASTAWKLNFNSPDCLDYKDQASWRFQVL
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttacctcaaacaacccccatacggcatgaatgggcttggcctggctgggccc
gccatggacctgctgcacccttccgtgggctatcctgctacaccgagaaagcagaggcgg
gagcgcaccaccttcacgcgctcgcagctggacgtgctggaggcgctcttcgccaagact
cgctaccctgacatcttcatgcgcgaggaggtggcactcaagatcaacctgcccgagtcc
cgagtccaggtttggttcaagaaccgccgggccaaatgccggcagcaacagcagagcggc
agtgggaccaagagccgccccgccaagaagaagtcgtctccggtgcgggaaagttcaggc
tccgaaagcagcggccagttcacgccacccgcggtgtccagctccgcctcgtcttcgagc
tcggcgtccagcgcctccgccaaccccgcagtcgccgccgcggcgggtctgagcgggaac
ccggcggtggccgtgccgtcgtcgctcagtgcgccggccgcctcgtccatctggagtccg
gcctccatctcgcccagttcggcgcccgcgtcggtgtctgtgcccgagcctttggccgcg
ccgagcaacgcatcttgcatgcagcgctcggtggccgctggcgccgcttcagccgcagcc
tcgtaccccatgtcctacggccagggcggcagctacggccagggctacccagcgccctcc
tcctcctacttcggcggtgtggactgcagctcctatctggcgcccatgcactcgcaccac
cacccgcaccagctcagcccgatggcgccctcctccatggcgggccaccaccaccaccac
ccgcacgcgcaccaccccttgagccagtcgtcgggccaccaccatcaccaccaccatcac
caccaccaggggtacggcggctccgggctggccttcaactccgccgactgcttggattac
aaggagcctggggctgctgctgcttccacggcctggaaactcaatttcaactcgcccgac
tgtctggactataaggaccaagcttcctggcggttccaggtcttgtga
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