Suncus etruscus (white-toothed pygmy shrew): 126024391
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Entry
126024391 CDS
T09902
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03083
Polycomb repressive complex
setr04980
Cobalamin transport and metabolism
setr05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
126024391
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
126024391
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
126024391
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
setr01009
]
126024391
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126024391
03029 Mitochondrial biogenesis [BR:
setr03029
]
126024391
Protein phosphatases and associated proteins [BR:
setr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126024391
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
126024391
HMT complexes
COMPASS/SET1 complex
126024391
MLL-HCF complex
126024391
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
126024391
Mitochondrial biogenesis [BR:
setr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
126024391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
Motif
Other DBs
NCBI-GeneID:
126024391
NCBI-ProteinID:
XP_049640757
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All DBs
Position
12:9782507..9791552
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AA seq
1287 aa
AA seq
DB search
MRSALSPAKHPEVFLLPRWKRVVGWAGPGPRPRHGHRAAAIRELIIVFGGGNEGIVDELH
VYNTATNQWFSPAVKGDIPPGCAAYGFVCDGSRLLVFGGMVEYGKYSSDLYELQASHWKW
KKLKAKAPVTGPPPCPRLGHSFTLVNNKCYLFGGLANDSEDPKNNIPRYLNDLYILEMCP
GSGEVAWDIPITYGALPSPRESHTAVVYTEKYRKTSKLVIYGGMSGCRLGDLWTLDIETL
TWSKPSLSGLAPLPRSLHSATTIGNKMYIFGGWVPLVLDDDKVATHEKEWKCTNTLACLN
LDTMAWETIRMDKDTLEDNIPRARAGHCAVAINTRLYIWSGRDGYRKAWNNQVCCKDLWY
LETEKPLSPARVQLVRANTNSLEVSWGAVATADNYLLQLQKYELPITTATASSPTYNLIP
SALAYPPKSPATASVTPLLQPLTQGSYPKLMHQAVADPSTTNTIQVLPAVPGCSISVPVP
PKTKVADPQATTGSPLVTMEKTNQTGKDPVTATSLLAGLRMVQPKQSAQGMVIGNSPKMS
GIAALAAVAAATQKIPPASAPTPTVLSIPAGTTTVKTVTKTPGTTTLPATVKMASSPGIV
SNPATLMLKTAAAQVGASVSSTTSSSTRPVITVHKSGTVTIAQQAQVVTTVMGGVTKTIT
LVKNPISIPKSNALISNLGKVMSVVQTKSLQTSTTSGQVSVNPVTQIIQTKGPLPAGTIL
KLVNSADGKPATVITTTQARGDKNKSNILGINSMSPSTTKPTITKTIPMSAIITPASSMG
LSSNPGIKSPVSIITTKVMTSGTKAPAKIITNVPKTSTGPDQQGVAQVMLKGTPGQPSTI
PCTMRMEGVYLVTPVSISAIKPDVTTSMTKGTTGVTTLGTVTSTVSTSLAGAGSSGISAS
LATPITTLGTIASLSSHVINPTATTVSSAQTTLTAAGQPTTPVLSMKPFSQLTQGSLITA
PSNVEAQQGHELPESMLASFTPEQPAAKVIKTDSTQDIMQSSMVTLCSSMPSETQDMRMC
TNTATNTVTANHREHSHSHQIQFICDRQDAAASLGTSTTEQQSDGVRCICSSSSFETHKP
DTGNTITSTSNSFASTSDMARPHGCFNSPDESQEAIAARSSIGVGQQHFALFTCVANSTP
TVMQASESTGMLRGPQDALKPLSKTCQIRTGTTMTELDPRPSLFVSSLDLEAADHSLTFM
HSTSLSDHVRCSDPGSMDSPTVGLSQQMSVDHLGEAHSTHITSCTTMDAGEPFESLLIPR
PARKSSPSPTIIGTTSEALQYPSTTMT
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgcggagtgctctgagcccagctaaacacccagaggtgtttttgctgcctcgttggaag
cgtgtagtgggctgggctgggcctgggcccagaccccgccatggccaccgtgctgcagcc
atcagggagcttatcatagtatttggtggaggtaatgagggaatagtggacgaattgcac
gtgtacaacacagccaccaaccagtggttcagcccagccgtgaagggggacattccccca
gggtgtgcggcctatggctttgtgtgtgatgggagtcgcctgctggtatttggcggcatg
gtggagtatggcaagtacagcagtgatctttacgagctccaggccagccactggaagtgg
aagaaactcaaagcaaaggcacctgtaactgggccacctccgtgccctcgactgggacac
agcttcacccttgtgaacaacaaatgctatctgtttgggggtctggctaatgatagtgag
gaccccaaaaacaacattccgaggtatctaaatgacttgtacatcctggaaatgtgtcca
ggctctggagaagtagcctgggacatccccatcacttatggggcactaccctcaccccgg
gagtcacatactgccgtggtctacactgaaaaatacaggaagacgtccaagctagtaatc
tatggagggatgagtggctgtaggcttggagatctctggacactggacattgagactttg
acctggagtaagcctagtcttagtgggctggcacctctgcctcgaagtctccactcagcc
acgaccataggaaacaaaatgtacatctttggtggctgggtacctctggttttagatgat
gacaaagtagccacacatgagaaggaatggaagtgcaccaacacactggcttgtctcaac
ttggataccatggcatgggagaccattcggatggataaagacaccctggaagacaatatt
ccccgggctcgagctggccattgtgcggtagcaatcaatacccgcttgtacatttggagt
ggtcgtgatggctaccgaaaggcctggaacaaccaggtctgctgcaaggatctctggtac
ttagaaacagaaaaaccactgtctccagcccgggtacaactcgtgagggctaataccaat
tcactagaggtgagctggggagcagtggcaacagctgacaattaccttctgcagcttcag
aaatatgaattacctatcactactgctactgccagtagtcctacatacaacctcattcca
tctgcacttgcctaccctcctaagagccctgctacagcgtcagtcacacctttactgcag
ccactgactcaaggctcctaccccaaactcatgcaccaggctgttgcagatccctcaacc
accaacaccatccaggtcttgccagcagtgccgggctgttcaatttctgtgcctgtccca
cccaaaactaaagtggctgatcctcaggctacaacaggaagcccattggttaccatggaa
aagaccaaccaaactggaaaagaccctgttacagcgacctcccttcttgctggtctgcga
atggtccagccaaagcagagtgcccaagggatggtaattggcaacagtcccaagatgagt
gggatagctgctctggcagcagtggctgctgccacccagaagatccctcctgcctcagca
cccacacccactgtgcttagcatcccagctggcactactactgtcaagactgtcaccaag
acacctggtaccactaccctgccggccactgtgaagatggcttcctcaccgggcatagtg
agcaacccagccactctcatgctaaagactgcagctgctcaggtgggagcatctgtctct
tctacgactagttcatccacccgccctgtcatcacagtgcataagtcagggactgtaaca
atagctcagcaagcacaggtggtgaccacagtgatgggtggggtcaccaagaccattacc
ctagtaaagaatcctatctctatcccaaaaagcaatgctctgatttccaatctgggaaaa
gtaatgtcagtggtccagaccaaatcacttcagacttcaacaacatcaggtcaagtgtca
gtgaatcctgtgactcagatcatccagaccaaagggcctttgccagcagggaccatcctg
aagctggtcaactcagcagatggcaaacccgccactgtcatcactaccacacaggccaga
ggggacaagaataagtccaatatcctgggcatcaacagcatgtccccaagtaccaccaag
cccaccatcactaaaaccatccctatgtcagccattatcacaccggccagctccatgggt
ctaagcagtaatcctggcatcaagtctcctgtctccattatcaccaccaaggttatgact
tcaggaactaaggcacctgccaaaatcatcaccaatgtacccaaaacttccactggccct
gaccaacaaggagtggcacaggtgatgctaaaggggactcctggacaacccagcactatc
ccctgcaccatgcgtatggaaggtgtctacctggttactcccgtcagtatctctgccatc
aagccagatgtcaccacttcaatgacgaagggcaccacaggtgtcacaacattaggcaca
gtgacaagcactgtttctaccagccttgctggagctggcagcagtggcatcagtgcctcc
ctggctacacccatcaccaccttaggtaccattgcctctctctcaagccacgtgatcaac
cccactgccaccactgtgtcatctgcccagactactctgacagcagctggccagcccact
acacctgtcctgtctatgaagcctttctcccagctcacccaggggagtctgatcacagcg
cccagcaatgtggaggctcagcagggtcatgaactccctgagtccatgttggcttccttt
actccagaacagcccgctgccaaggtcataaaaactgactcaacccaggatatcatgcaa
tcaagcatggtgacattatgttctagcatgcctagtgagacccaggacatgagaatgtgc
accaatacagccaccaacacagtcacagccaaccacagggaacattctcatagccaccaa
atacaatttatttgtgacaggcaagatgcagctgcttctcttgggacttcaacaacagaa
cagcagagtgatggtgtaaggtgtatctgttccagctcttcatttgagacccacaagcca
gacactggcaacacaatcacctccacttccaactcatttgcctccacttccgacatggcc
agacctcatggctgctttaattcacccgatgagagccaagaggccattgctgccaggtcc
agtattggtgtgggacagcagcattttgccctgttcacctgtgtagcaaattccaccccc
actgtgatgcaggctagtgagtccactgggatgctgagaggtcctcaggatgctctcaag
cccttgagcaaaacctgccagatcaggactggcaccaccatgactgagctggatcccaga
ccctcactatttgtgtcaagcctggacctagaggctgctgaccacagccttacttttatg
cattccacctctttgagtgaccatgtcaggtgcagtgatcccggcagcatggatagcccc
acagtaggattaagtcagcagatgtctgtggatcatctcggggaggctcattctacccac
atcacatcctgtaccaccatggatgctggtgagcccttcgagagcctcttgatccccaga
cctgcacgcaagagctcacctagtcccactattattgggacaacctctgaggcactgcag
tacccttcaaccaccatgacttaa
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