Suncus etruscus (white-toothed pygmy shrew): 126024407
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Entry
126024407 CDS
T09902
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04512
ECM-receptor interaction
setr04514
Cell adhesion molecules
setr04820
Cytoskeleton in muscle cells
setr05144
Malaria
setr05205
Proteoglycans in cancer
setr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126024407 (SDC1)
04514 Cell adhesion molecules
126024407 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126024407 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
126024407 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
126024407 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
126024407 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126024407 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
setr04090
]
126024407 (SDC1)
00535 Proteoglycans [BR:
setr00535
]
126024407 (SDC1)
Membrane trafficking [BR:
setr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
126024407 (SDC1)
CD molecules [BR:
setr04090
]
Proteins
126024407 (SDC1)
Proteoglycans [BR:
setr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
126024407 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Glycophorin_A
HS1_rep
Motif
Other DBs
NCBI-GeneID:
126024407
NCBI-ProteinID:
XP_049640783
LinkDB
All DBs
Position
12:complement(85236520..85257321)
Genome browser
AA seq
306 aa
AA seq
DB search
MRRAALWLCLCALALRLQPALPQLMTINMAPEDQDSSGDDSDNFSGSGAGSLPDINMFQQ
TYPTGSNPGLLTAVPTAPEPTGLDSTVTTLLTTEKLEKEMAVPVEGEPREALEKEASPAP
KETTQYPSTQPESRKEATTVLTPVTSQPHGGMGPEPQETSASSAPSQFDPHVHHSEEGVS
AVTQKVPEDDGATNQMPANEGSGEQDFTFETTGENAVEGSVERDQQDRSAMGHEARGASQ
SLLDRKEVLGGVIAGGLVGLIFAVCLVAFMLYRMKKKDEGSYSLEEPKQANGGAYQKPSK
QEEFYA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctctgtctttgcgcactggcgctgcgcctgcagccggct
ctcccgcaactcatgaccataaacatggctccggaagatcaggacagttctggagatgac
tcggacaacttctccggctcaggcgcaggttctctgccagatatcaacatgttccagcag
acataccccactgggagcaacccgggactcttgacggctgtgcccacggctcctgagccc
actggcctggacagcaccgtgactaccctgctcacaacagagaagctggaaaaggagatg
gcagtaccggtggagggggagcccagagaagccctagagaaggaggccagccctgcaccc
aaagagaccacacagtaccccagcacccaaccagaatccagaaaggaagccaccacggtc
ctgacacccgtcacctcccagccccatgggggcatggggcctgagcctcaggagacttca
gcttcgtcggcacccagccagtttgaccctcatgttcaccactcagaggaaggagtttcc
gctgtcacccagaaggtgcctgaggatgacggagccaccaaccagatgccagcaaatgag
ggctctggggagcaagattttaccttcgagaccactggggagaatgcagttgaaggctcc
gtggaacgggaccagcaagaccggtctgcaatgggccatgaagccaggggggcttcccag
agcctgctggacaggaaggaagttctaggaggagttattgctggcggcctggtgggcctc
atctttgctgtgtgcctggtggcgttcatgctctacagaatgaagaagaaggatgaaggc
agctactccttagaagagccgaaacaagccaatgggggagcctaccagaagcctagcaag
caggaggagttctatgcctga
DBGET
integrated database retrieval system
