Suncus etruscus (white-toothed pygmy shrew): 126024441
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Entry
126024441 CDS
T09902
Symbol
SMC6
Name
(RefSeq) structural maintenance of chromosomes protein 6
KO
K22804
structural maintenance of chromosomes protein 6
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
setr03400
]
126024441 (SMC6)
DNA repair and recombination proteins [BR:
setr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
126024441 (SMC6)
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
TPR_MLP1_2
AAA_29
DUF3993
AAA_21
Motif
Other DBs
NCBI-GeneID:
126024441
NCBI-ProteinID:
XP_049640816
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All DBs
Position
12:complement(82651664..82725329)
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AA seq
1097 aa
AA seq
DB search
MAKRKEENVLPPENAKRPRLEELEDFDRDGDEDECTVSFTNGTSTLTAAEVGIIESIQLK
NFMCHSMLGPFKFGSNVNFVVGNNGSGKSAVLTALIVGLGGKAVATNRGSSLKGFVKDGQ
NSADISITLRNRGDDAYKANVYGDSIIVQQHITMDGSRSYKLKSGTGTVVSTRKEELIAI
LDHFNIQVDNPVSVLTQEMSKQFLQSKNEGDKYKFFMKATQLEQMKEDYSYIMETKERTK
EQINQGEERLIELKRQCLEKEERFQSIAGLSTMKTNLEYLKHEMAWAVVNEIEKQLNAIR
DNIKIGEERAARLERKMEDQQVRLNDAERNYKDIQDKLEKISEETHARAPECMALKTDLI
AKKRTFNEAEVIYNRSLNEYRALKKDDEQLCRRIEELKKSTDQSLEPERLERQKKISWLK
EKVKGLQDQEISVNQDIEQFQQAIEKDKEEHTRIKREESDVKHILNYNQRQLKELKDSKT
DRLKRFGPHVPALLAAIDDAFKHGQFAYKPIGPLGACIHLRDPELALAIESCLKGLLQAY
WCHNHADERVLQALMKKFYSPGTSRPQIIVSEFRKEMYDVRHRAAYHPDFPTVLTALDIN
NAVVANSLIDMRGIETVLLIKSNSVARAVMQSQRPPRNCREAFTADGDQVFTGRYYSSEN
TRPKLLSRDVESEISDLENEIENKKAQILNLQQHLSALEKDIKRNEDIVKRCQLHYKELK
MKIRKGISEIRELENIEEHQSVDIATLEDEAQENKAKMKMVENNMEQQKENMEYLKGVKI
EAENKYDAIKQKINQLSEQADPLKDELNLADSELDNQKRGKRHYEEKQKEHLETLNKKKR
ELDVKEKELEEKMSQARQICPERIEVKKSASMLDKEINRLRQKIQAEHASHGDREEIMRQ
YQEAKETYLDLDNKVKTLRRFIKLLEEIMTHRYKTYQQFRRCLTLRCKLYFDNLLSQRAY
CGKMNFDHKNETLTISVQPGEGNRAAFNDMRALSGGERSFSTVCFILSLWSIAESPFRCL
DEFDVYMDMVNRRIAMDMILKMADSQRFRQFILLTPQSMSSLPSSKLIRILRMSDPERGQ
TTLPFRPVTQEEENDRS
NT seq
3294 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaagaaaggaagaaaatgttttgcctcctgaaaatgctaaaagaccaagacta
gaagagttggaagattttgatagagatggtgacgaggatgaatgtacagtgtcttttact
aatgggacttctaccttgactgcagccgaggttggaataattgagagtattcagttaaaa
aacttcatgtgccattcgatgcttggaccctttaaatttggttcaaatgtcaacttcgtt
gttggaaataatggaagtgggaagagtgcagttctcacagctctcatagttggacttggt
ggaaaagcagttgccacaaatagaggatcttctttaaaaggttttgtaaaagatggacag
aactcagcagatatctcgatcacattaagaaacaggggagatgatgcttataaagcaaac
gtgtatggggactcgataattgtacagcagcacatcaccatggatggcagccggtcttac
aaactgaaaagtggaacaggcactgtggtttctactaggaaagaagagctgattgcaatt
ctggatcattttaacatacaggtggataatccagtttctgttttaacacaagagatgagc
aaacagttcttgcagtctaaaaatgagggtgacaaatacaaattcttcatgaaagcaacc
caacttgaacagatgaaggaagactattcatacattatggaaacaaaagaaagaacaaag
gagcagataaatcaaggagaagagcgacttattgaactcaagcgccagtgtttggagaaa
gaagaacgatttcagagtattgctggcctcagtacaatgaagactaacttagaataccta
aaacatgaaatggcttgggcagtggtcaatgaaattgaaaaacaattgaatgctatcaga
gataatataaaaattggggaagagcgtgctgctcggcttgagaggaaaatggaagatcag
caggtcagacttaacgatgcagaaagaaattacaaggatattcaagataaattggaaaaa
attagtgaagagacacatgcaagagcaccagaatgtatggcactgaaaacagatttaatt
gctaagaaaaggacctttaatgaagctgaggttatatataaccgttccttaaatgagtat
agagctttaaagaaagatgatgaacagctttgcagaagaattgaagagcttaaaaaaagt
actgatcagtctttggaacctgagcgattggaaagacaaaaaaaaatatcatggttaaaa
gagaaggtaaagggtttacaggatcaagaaatttctgtcaatcaagatatcgaacaattt
cagcaagccatagaaaaggacaaagaagagcatactagaattaagagagaagaatcagat
gtaaagcatatactgaactataatcagaggcaactgaaggaactgaaagatagtaaaact
gatagactgaaaagatttggacctcatgttccagctcttcttgctgcaatagatgatgcc
ttcaaacatggacagtttgcctataaacctataggccctctaggagcttgcattcatctt
cgggatcctgagctggctttggctattgaatcttgtttgaaaggacttttgcaagcctat
tggtgtcataatcatgctgatgaaagggtacttcaagcattgatgaaaaagttttattca
ccaggaacctcaaggccacagataattgtttctgaatttcggaaagagatgtatgacgta
cgacacagagctgcttatcatccagattttccaacagttctcacagctttagacataaat
aatgcagttgttgccaacagcctcattgacatgagaggcatagaaacagtgctgctaatc
aaaagtaattctgtagctcgtgcagtaatgcagtcccaaaggccacccagaaattgtaga
gaagcttttactgctgatggtgatcaggtgtttacaggacgttattactcatctgaaaac
acaagacccaaattactaagcagagatgtagaatctgaaataagcgacctggagaatgaa
attgaaaataagaaggctcagatattaaatcttcaacaacatttgtctgccttagaaaag
gatattaaacgtaatgaagacattgttaaaaggtgccaactacattataaagaattaaag
atgaaaataagaaaaggtatttctgaaattcgggaacttgaaaatatagaagaacaccaa
tctgtggatattgcaacattggaagatgaagctcaagaaaacaaagccaagatgaaaatg
gttgaaaataatatggaacaacaaaaggaaaatatggaatatcttaaaggtgtgaaaata
gaagcagaaaacaagtatgatgcgattaagcagaaaattaatcaattatcagagcaagca
gatcctcttaaggatgaattaaatcttgctgactcagaactggataaccagaagcgaggg
aaacggcattatgaagaaaaacaaaaggaacacttggaaactttgaataaaaagaaacga
gaactggatgtgaaagaaaaagagctagaggagaaaatgtcacaagcaagacaaatctgc
ccagagcgaatagaagtgaaaaaatctgcatcaatgctagacaaagaaattaatagatta
agacaaaagatacaggccgaacatgctagtcatggagatagagaagaaataatgaggcag
tatcaagaagcaaaagaaacctatcttgacttggataataaagtgaagactttaaggagg
tttattaaattgctagaagaaataatgacccacagatacaagacttatcagcagtttaga
aggtgtttaactttacgatgcaaattgtactttgacaacttattgtctcaacgggcctat
tgtgggaaaatgaattttgaccataaaaatgaaacacttactatatcagttcagcctggc
gagggaaatagagctgccttcaatgacatgcgagccttatctggaggtgaacgttctttt
tccacagtttgcttcattctttccctgtggtccattgctgaatctcctttcagatgcctg
gatgaatttgatgtttacatggacatggttaaccgaagaattgcaatggacatgatactc
aagatggccgattcccagcgtttcaggcagttcatcttgcttacccctcaaagcatgagc
tcacttccctcaagcaaactaattagaatacttcgaatgtctgatcctgaaagaggacaa
acgacattgcccttccgacctgtgactcaagaggaggaaaatgaccgaagttga
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