Suncus etruscus (white-toothed pygmy shrew): 126024606
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Entry
126024606 CDS
T09902
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126024606 (AFF3)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
126024606 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
Motif
Other DBs
NCBI-GeneID:
126024606
NCBI-ProteinID:
XP_049640996
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All DBs
Position
12:complement(19389753..19868530)
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AA seq
1256 aa
AA seq
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MDSFDLALLQEWDLESLWGEDILSQRNDSLVVEFQPSAGRCRSAYEPDRNVLRRKERERR
NQETQQDDGTFNSSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGV
PKPGIPQAPVNKIDEHFAADSRAQTQPSSVCSSTSSTPAAVPVQQSKRGTMGWQKTGHPP
SEGQQRATQQGSLRTLLGDGVGRQQPRAKQVSNVEVGLQTQERPPSMAAKHSGGGHCVQN
FPSSLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSPTETSVHCTAYRGLPAAKTESA
RAKAKLSKFNLPKQGEESRAGETNSCVEEIIREMTWLPPLSAIQAPSKVEPAKFPFTNKD
SQLVSSGHNNPKKGDAEPGSPDNGTSNTSMLEDDLKLSSDEEENEQQAAQRTTLHVLSDS
TLVQQATCRASVPSSRRSSSGSSSSGSSSSSDSESSSGSDSETESSSSESEASKAPHYSS
PEAEPASSNKWQLDKWLNKVNPHKPPPILVHHESPGPEGAPYYAPPSKDQGAPECGHGTG
LRDKEPKGACKDEQRPRTASKAPGSRAGKQKSPPAAGPAVGPAESTPAPARRSAGKKPPR
RAERPVERPGAGGDGGPCPRPDEPPPAPEALGSGAGGGPPEPPKASKPCANGRSGHRKEP
RPALPCEKRRTRGLGRIAPKSREFIETESSSSSSSSSSSDSDPESEQDEPPPAKAPGPGA
GPPDARLKEAALGGGGGCGGPRAPVGSISARTGGDVAREPDEQLYTLVPFGRNELLSPLK
DSDDGRALWVKIDLSLLARVPGEHLPPEPGVLSAPAAKEAADCTPAGPQGHPGHGHATDA
LPEKALPKSKRKRKCDNDDDYREVKKATGEKEGSSRLATANASLSASHCTMSINSLAIPI
NKNEKMLRSPISPLSDASKHKFSSEDLTSSCRSNGTSLFASAPSNKKHKAENQLQSHGGD
LPKAAHNNPENILHKSRLQTEPWSPGTNDHRDCKRQKLVFDDMPRSADYFMQEAKRMKHK
ADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAMRLKTHSG
PNATPEDKQLAALCYRCLALLYWRMFRLKRDHAVKYSKALIDYFKNSSKAAQAPSPWGAS
GKSTGTPSPMSPNPSPTSSVGSQGSLSNTSALSPSTIVSIPQRIHQMAANHVSITNSILH
SYDYWEMADNLAKENREFFNDLDLLMGPVTLHSSMEHLVQYSQQGLHWLRNSTHLS
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atggacagcttcgacctggcgctgctgcaggagtgggacctcgagtcgctgtggggtgaa
gacatcttaagccagaggaatgactctctcgtggtggagtttcagccatcagctggcaga
tgcaggagtgcctatgaaccggatagaaatgtgttacgaaggaaagaacgagaaaggaga
aaccaggaaactcagcaggatgatggcacctttaattcgagttactctctcttcagcgaa
ccctacaagacgaacaagggggatgaactctccaatcggatccagaatactttgggaaat
tatgatgaaatgaaggactttttaacggatcgatccaatcagagccatcttgttggagtg
cccaaacctggcattcctcaggctccagtgaacaaaatcgatgaacattttgctgcagat
tcaagagcccagacccagccctcctctgtctgcagctccacatcgtccacaccagcagct
gtccctgttcagcagagtaagaggggcaccatgggctggcagaagactggccacccccct
tctgaaggccagcaaagagcaacacaacagggctcgctcaggactttgcttggagatggt
gttggcagacagcaaccacgggccaaacaagtgtccaatgtagaggtgggtcttcagacc
caggagaggcccccttctatggcagccaagcacagtggaggtggacactgtgttcaaaac
ttcccttcatccctggcttccaaacccagcctggtccagcagaagccaacggcctatgtg
cggccaatggatggccaagatcaggctcctgacgagtctccaaagcttaagtcgcccaca
gaaaccagcgttcactgcacagcctacagaggactcccggccgccaaaacagagtctgcc
agagccaaggccaaactctccaagttcaacctgcccaaacaaggagaggagagcagagct
ggagaaactaacagctgtgtggaagaaataatccgggaaatgacctggcttccaccactg
tcagctatccaagcacccagcaaagtggaaccagccaagtttcccttcacaaataaggat
tctcagcttgtttcctctggacacaataatccaaagaaaggtgatgcggagcctgggagt
ccagacaatggcacatcaaatacatcaatgctagaagatgaccttaagctaagtagtgat
gaagaagaaaatgagcagcaggcagcccagagaaccactctccacgttctgtctgacagc
accctggtccagcaggccacctgcagggcctctgtgccttccagccggcgcagcagcagt
ggcagcagcagcagtggcagcagctcatccagtgattcggagagcagctcggggtccgac
tcggagacagagagcagctctagtgagagtgaggccagcaaggcgccccactactccagc
cccgaggccgagcccgcgtcctccaacaagtggcagctggacaaatggctcaacaaggtg
aatccacacaagccgcccccgattctggtgcaccacgagagcccggggcccgagggcgcc
ccgtactacgcgccacccagcaaggaccagggagcgccggaatgtggccacggcacgggc
ctgcgggacaaggagcccaagggcgcctgcaaggacgagcagcggcccaggacggccagc
aaggccccgggcagcagggcgggcaagcagaagtcgcctcccgccgcgggccccgccgtg
ggtcctgcagagagcacgcccgccccggcgcgcaggtcggccggcaagaagcccccacgg
cgcgcggagaggccggtggagaggcccggggcggggggcgacgggggtccctgcccaagg
cccgacgagcccccgccggcccccgaggcgctgggctcgggtgcggggggaggccccccg
gagccccccaaggccagcaagccctgtgccaacggccgcagtggccaccgcaaggagccg
cgccccgcgttgccctgcgaaaagcgccgcacgcgcggcctgggcaggatcgcgcccaag
tccagggagttcatcgagaccgagtcgtcgtcctcgtcgtcgtcgtcgtcctcgtccgac
tcggacccggagtcggagcaggacgagccgccgccggccaaggcgccggggccgggtgcg
ggcccgcccgacgcgcggctcaaggaggcggcgctgggcggtggaggaggctgcggcggg
ccccgcgcgcccgtgggctccatcagcgccaggaccggcggcgacgtggcccgggaaccc
gacgagcagctctacacgctcgtgcccttcggccgcaacgagctgctgtcgccgctcaag
gacagcgacgatggccgcgcgctctgggtcaagatcgacctgagcctcctggccagggtc
cccggagagcacctgccccccgagcccggggtcctgagcgcgcccgcagccaaggaggcg
gcggactgcacgcccgccggcccccagggccaccccggacacggacacgccaccgatgcc
ctgcccgagaaggccttgcccaaatccaagaggaaacgcaagtgtgacaatgacgatgac
tacagagaggtcaagaaggccacaggtgagaaggagggctcctcacgcctggccactgcc
aatgccagcctgtctgccagccattgcaccatgagcatcaatagcttggcaattccaatc
aataaaaatgagaaaatgctgcgctcacccatctcacccctctccgacgcctccaaacac
aaattctccagcgaggacttgacatcgtcctgcagatcaaatggcaccagcctctttgct
tctgccccatccaacaaaaagcataaggcagagaaccagctgcagtctcatggaggagac
ctcccgaaagctgctcacaacaatcctgaaaacattcttcacaagtcacggctgcagaca
gagccatggtcaccaggcaccaacgaccacagggattgcaagaggcagaaactcgtcttt
gatgacatgcctcgtagtgcggattattttatgcaagaagcgaagcggatgaaacataaa
gcagatgccatggtggaaaagttcggaaaggctttgaattatgcagaagcagctttgtca
tttattgagtgtggaaatgccatggaacaaggtccaatggaatccaaatctccttacacg
atgtattcagaaactgtagagctcatcaggtatgctatgaggctaaaaacccactcaggc
cctaatgctactcccgaggacaaacaactagctgcattatgttaccgatgccttgctctc
ctgtactggcggatgtttcgcctcaaaagggaccatgctgtgaagtattcaaaagcactg
atcgactacttcaagaattcatcgaaagctgcccaagcgccatctccatggggggcaagt
ggaaagagcacgggaaccccgtcccccatgtctcccaacccctcccctaccagctctgtg
gggtcgcaggggagcctgtccaacaccagtgccctgtccccgtccaccattgtcagcatt
ccccagcgcatccaccagatggcagccaaccacgtgagcatcaccaacagcatcctgcat
agttatgactactgggagatggcggacaacctggccaaggagaacagagagttcttcaat
gacctggatctgcttatgggccccgtgaccctccacagcagcatggagcacctggtccag
tactcccagcagggtctgcactggctgcggaacagcactcacctgtcatag
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