KEGG T09902: 126024691

Suncus etruscus (white-toothed pygmy shrew): 126024691

Entry

126024691         CDS       T09902

Symbol

SEM1

Name

(RefSeq) 26S proteasome complex subunit SEM1

K10881

26 proteasome complex subunit DSS1

Organism

setr Suncus etruscus (white-toothed pygmy shrew)

Pathway

setr03050

Proteasome

setr03440

Homologous recombination

setr05010

Alzheimer disease

setr05012

Parkinson disease

setr05014

Amyotrophic lateral sclerosis

setr05016

Huntington disease

setr05017

Spinocerebellar ataxia

setr05020

Prion disease

setr05022

Pathways of neurodegeneration - multiple diseases

setr05169

Epstein-Barr virus infection

Brite

KEGG Orthology (KO) [BR:setr00001]
09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    126024691 (SEM1)
  09124 Replication and repair
   03440 Homologous recombination
    126024691 (SEM1)
09160 Human Diseases
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    126024691 (SEM1)
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    126024691 (SEM1)
   05012 Parkinson disease
    126024691 (SEM1)
   05014 Amyotrophic lateral sclerosis
    126024691 (SEM1)
   05016 Huntington disease
    126024691 (SEM1)
   05017 Spinocerebellar ataxia
    126024691 (SEM1)
   05020 Prion disease
    126024691 (SEM1)
   05022 Pathways of neurodegeneration - multiple diseases
    126024691 (SEM1)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:setr03019]
    126024691 (SEM1)
   04131 Membrane trafficking [BR:setr04131]
    126024691 (SEM1)
   03051 Proteasome [BR:setr03051]
    126024691 (SEM1)
   03400 DNA repair and recombination proteins [BR:setr03400]
    126024691 (SEM1)
Messenger RNA biogenesis [BR:setr03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     126024691 (SEM1)
Membrane trafficking [BR:setr04131]
Exocytosis
  Tethering complex
   Exocyst complex assembly proteins
    126024691 (SEM1)
Proteasome [BR:setr03051]
Eukaryotic proteasome
  Regulatory particles
   PA700 (19S proteasome)
    non-ATPase subunits
     126024691 (SEM1)
DNA repair and recombination proteins [BR:setr03400]
Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Other HR factors
     126024691 (SEM1)

SSDB

Motif

Pfam:

DSS1_SEM1

Other DBs

NCBI-GeneID:

126024691

NCBI-ProteinID:

XP_049641096

LinkDB

Position

1:complement(89929519..89947321)

AA seq 70 aa
MSEKKQPVDLGLLEEDDEFEEFPAEDWAGLDEDEDAHVWEDNWDDDNVEDDFSNQLRAEL
EKHGYKMETS

NT seq 213 nt +upstreamnt +downstreamnt
atgtccgagaaaaagcagccggtagatctgggtctcttggaggaagatgacgagttcgag
gagttccccgcggaagactgggctggtttagatgaagatgaagatgcacatgtctgggag
gataattgggatgatgacaatgttgaggacgacttttccaatcagttgcgcgctgagcta
gagaaacatggttataagatggagacttcataa

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