Suncus etruscus (white-toothed pygmy shrew): 126024743
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Entry
126024743 CDS
T09902
Symbol
VPS50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126024743 (VPS50)
Membrane trafficking [BR:
setr04131
]
Protein recycling
Others
EARP complex
126024743 (VPS50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
126024743
NCBI-ProteinID:
XP_049641166
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All DBs
Position
1:86450572..86577881
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AA seq
964 aa
AA seq
DB search
MQKIKSLMTRQGLRSPPENISDLGAIENLRVPGKEEFRELREQPSDPQADQELINSIEQV
YFSTDSFDVVKYELEKLPPVLNLQELEEYRDKLKQQQAAVSKKVADLILEKQPAYVKELE
RVTSLQTGLQLAAVICTNGRRHLNIAKEGFTQASLGLLANQRKRQLLIGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYSCISELNSKLQDTLEQIEEQLDVA
LSKICKNFDINHYTKVQQAYQLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNT
DTKFQKLQYKDLCTHVTPDSYIPCLADLCKALWEVMLSYYRTMEWHEKHDNEDTTSASEG
SNLMGTEETNFDRGYIKKKLEHGLTRIWQDVQLKVKTYLLGTDLSIFKYDDFIFVLDIIS
RLMQVGEEFCGSKSEVLQESIRKQSVNYFKTYHRTRLDELRMFLENETWELCPVKSNFSI
LQLHEFKFMEQSRSPSVSPSKQSASSSSKTVTLFEQYCSGGNPFEIQANHKDEETEDVLA
SNGYESDEQEKSAYQEYDSDSDVPEELKRDYVDEQTGDAPVKSVSRETLRSRKKSDYSLN
KVNAPILTNTTLNVIRLVGKYMQMMNILKPIAFDVIHFMSQLFDYYLYAIYTFFGRNDSL
ESTGLGLSSSRLRTTLNRIQESLIDLELSADPTATLTAAEERKEKIPSPHLSHLVVLTSG
NTLYGLAERVVATESLVFLAEQFEFLQPHLDAVMPAVKKPFLQQFYSQTVSTASELRKPI
YWIVAAKAIDYEQMLLLMANVKWDVKEIMSQHNIYVDSLLKEFEQFNRKLNEVSKRVRIP
LPVSNILWEHCIRLANRTIVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDIRPIPDK
EFVETYIKAYYLTENDMERWIKEHREYSTKQLTNLVNVCLGSHINKKARQKLLAAIDDTD
RPKR
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaaataaaatctcttatgacccgacagggcctgagaagccctcctgagaacatc
agcgatcttggggccattgagaatcttcgagttcctggcaaggaggaatttcgagaactt
cgagaacagcctagtgaccctcaagctgaccaagagttaattaatagcattgagcaggtg
tatttttctacagactcatttgatgtcgttaaatatgaattggagaaacttcctcctgtt
ctcaatttacaagaattagaagaatacagagacaaattaaaacaacagcaagcagcagtc
tctaaaaaagtggcagatttaatccttgaaaaacagcctgcttatgtaaaggaactcgaa
agagttacctcactacagacgggtctacagttagctgctgtgatttgcacaaatgggagg
agacatttgaatattgcaaaggaaggctttactcaagctagtttaggccttcttgcaaat
caaaggaaacgtcagttgttgatcggacttctgaaatctctgagaactatcaaaacattg
caaagaacggatgtccgcttaagtgaaatgcttgaggaggaagactatccaggagctatt
cagttgtgcctggaatgtcagaaagctgcaagcacttttaaacattacagttgtataagt
gaactgaattcaaagctgcaagacactctagaacaaattgaggaacagttggatgttgct
ctttctaaaatatgcaaaaattttgacattaaccattataccaaggttcaacaagcttat
caacttcttggaaaaacacagacggcaatggatcaacttcatatgcactttacccaagcc
attcacaataccgtgtttcaagttgttcttggttatgtggagctttgcgcaggaaataca
gatacgaaattccaaaaactgcaatataaagatctctgtacacatgttaccccagatagc
tatattccatgccttgctgatctgtgcaaagctctgtgggaagttatgctcagttattac
aggactatggaatggcatgagaaacatgacaatgaagatactacttctgcttctgaaggg
agtaatctgatgggtactgaagaaactaattttgaccgtggctacataaaaaagaaatta
gaacatggacttacacgaatatggcaggatgtccagctaaaagtgaaaacctatttactt
ggaactgatttgtcaatattcaagtatgatgatttcatctttgttttggatataatcagc
aggttgatgcaagttggagaagaattttgtggtagcaagtctgaagttttgcaagaatct
attagaaaacaaagtgtcaattattttaagacctatcatagaacacggcttgatgaattg
agaatgttcctcgagaatgagacttgggaactttgtcctgtgaaatcaaatttcagtatc
ttgcagcttcatgaatttaaattcatggaacagtctcgttctccatcagtttcacctagt
aagcagtcagcctcatcttcctcaaaaacagttacattgtttgagcaatactgtagtggg
ggaaatccatttgaaatacaggccaaccataaagatgaagaaacggaagatgtcctggct
tctaatgggtatgaatctgatgaacaagagaaaagtgcctatcaggaatacgacagtgac
agtgatgttcctgaggaactgaaacgagattatgtggatgaacagacaggagatgctcct
gtgaaaagtgtttcccgagaaactctgagaagcaggaagaaatcagattacagtctaaat
aaagtgaatgcacccatcttaacaaatacaacactgaacgtaataagacttgttggtaaa
tatatgcagatgatgaacattcttaagccaattgcttttgatgttatacatttcatgtct
caactgtttgattattacttgtatgcaatatacaccttttttggtcggaatgattcgctg
gaatcaacaggactgggcctcagtagcagtaggctaagaacaactctgaacagaatacaa
gaaagccttattgatctggaactttcagctgatcctacagccacacttacagcagcagaa
gagagaaaagagaagatcccaagcccacacctcagtcatctagtagttttgacatctggg
aatacattgtatgggttggcagaaagagttgtagctacagaatctttggtattcttggct
gaacaatttgagttccttcaaccgcatctggatgctgtgatgcctgcagtcaaaaagccc
ttccttcagcagttttattctcagacagtctcaacggccagtgaacttcgcaaaccgatt
tattggattgtagctgctaaagccattgattatgaacaaatgctgctcctaatggcgaat
gtgaaatgggatgtgaaagaaattatgtcacagcacaacatatatgtagattcattgtta
aaggaatttgaacagtttaacaggaaattaaatgaagtttctaaaagagtgaggataccc
ttgcctgtgtctaacatactctgggaacattgtatacgactggctaatagaactattgtg
gaaggatatgctaacgtcaagaaatgtagtaatgaaggtcgtgccttgatgcaattggat
tttcaacagtttttaatgaaactggagaaacttacagatatcagacccattcctgataaa
gaatttgtggaaacctatattaaagcctactaccttacagagaatgacatggaacgctgg
atcaaagagcacagggaatattcaacaaaacagctgacaaatctggtaaatgtttgcctg
ggatcccatattaataagaaagcaagacaaaaactactagcagctatagatgatacagac
agacccaaaagataa
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