KEGG   Suncus etruscus (white-toothed pygmy shrew): 126024753
Entry
126024753         CDS       T09902                                 
Symbol
TBP
Name
(RefSeq) TATA-box-binding protein
  KO
K03120  transcription initiation factor TFIID TATA-box-binding protein
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr03022  Basal transcription factors
setr05016  Huntington disease
setr05017  Spinocerebellar ataxia
setr05165  Human papillomavirus infection
setr05166  Human T-cell leukemia virus 1 infection
setr05203  Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:setr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    126024753 (TBP)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    126024753 (TBP)
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    126024753 (TBP)
   05165 Human papillomavirus infection
    126024753 (TBP)
  09164 Neurodegenerative disease
   05016 Huntington disease
    126024753 (TBP)
   05017 Spinocerebellar ataxia
    126024753 (TBP)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:setr03000]
    126024753 (TBP)
   03021 Transcription machinery [BR:setr03021]
    126024753 (TBP)
Transcription factors [BR:setr03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   TATA-binding proteins
    126024753 (TBP)
Transcription machinery [BR:setr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     126024753 (TBP)
  RNA polymerase III system
    TFIIIB
     126024753 (TBP)
  RNA polymerase I system
    SL1/TIF-1B
     126024753 (TBP)
SSDB
Motif
Pfam: TBP TFIIA ANAPC_CDC26 Presenilin VPS13_N
Other DBs
NCBI-GeneID: 126024753
NCBI-ProteinID: XP_049641174
LinkDB
Position
12:8483632..8510857
AA seq 314 aa
MDQNNSLPPYAQGLSSPQGAMTPGLPIFSPMMPYGTGLTPQPIQSSNSLSMLEEQQRQQQ
QQQQQQQQQQQQAAVTTVQSTSQQATQGPAGQTPQLFHSQTLTTAPLPGTTPLYPSPMTP
MTPITPATPASESSGIVPQLQNIVSTVNLGCKLDLKTIALRARNAEYNPKRFAAVIMRIR
EPRTTALIFSSGKMVCTGAKSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVK
FPIRLEGLVLTHQQFSSYEPELFPGLIYRMIKPRIVLLIFVSGKVVLTGAKVRAEIYEAF
ENIYPILKGFRKTT
NT seq 945 nt   +upstreamnt  +downstreamnt
atggatcagaacaacagcctaccaccttatgctcaaggcctgtcttcccctcagggcgcc
atgactcctggactacccatctttagtccaatgatgccgtatggcacaggactgacccca
cagcctattcagagctccaacagtctgtctatgttagaagaacaacaacggcagcagcag
caacagcaacaacagcagcagcaacaacagcagcaagcagcagtgactacagttcagtca
acctcacagcaggctacccaggggccagcaggccagacgccacagctgttccactcacag
actcttacaactgctcccttgccgggcaccacccccctctatccctctcccatgacgcct
atgacccccatcacacctgccacacccgcctccgagagctctgggattgtgccacagctc
caaaatatcgtatccacagtgaatcttggttgtaagcttgacctaaagaccattgcactt
cgtgcccgaaatgctgagtataatcccaagcggtttgctgctgtgatcatgaggataaga
gaacctcgaaccactgcactgatattcagttctggaaaaatggtgtgcactggagcaaaa
agtgaggagcaatcgagattagcggcaagaaaatatgccagagttgtacagaagttgggt
ttcccagctaagttcttggacttcaagattcagaacatggtggggagctgtgatgtgaag
ttcccaatcagattagaaggccttgtcctaacccaccagcagtttagtagttatgaacca
gagctgtttccaggtttaatctacagaatgatcaaacccagaattgttctccttattttt
gtttctggaaaagttgtattgacaggtgctaaagtcagagcagaaatttatgaagcgttt
gaaaacatctaccctattctaaaaggattcaggaagacaacgtaa

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