KEGG   Suncus etruscus (white-toothed pygmy shrew): 126025482
Entry
126025482         CDS       T09902                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
setr  Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04340  Hedgehog signaling pathway
setr04360  Axon guidance
setr05200  Pathways in cancer
setr05205  Proteoglycans in cancer
setr05217  Basal cell carcinoma
setr05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:setr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    126025482 (SHH)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    126025482 (SHH)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126025482 (SHH)
   05205 Proteoglycans in cancer
    126025482 (SHH)
  09162 Cancer: specific types
   05226 Gastric cancer
    126025482 (SHH)
   05217 Basal cell carcinoma
    126025482 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:setr01002]
    126025482 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:setr00536]
    126025482 (SHH)
Peptidases and inhibitors [BR:setr01002]
 Cysteine peptidases
  Family C46: hedgehog family
   126025482 (SHH)
Glycosaminoglycan binding proteins [BR:setr00536]
 Heparan sulfate / Heparin
  Morphogens
   126025482 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Vint Ribosomal_S6e
Other DBs
NCBI-GeneID: 126025482
NCBI-ProteinID: XP_049641240
LinkDB
Position
13:1965713..1972171
AA seq 434 aa
MLLPAARCLLLLLSYSMLARPGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLGAS
GRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQWPG
VKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRGKYGMLARLAVEAGFDWVYYESKA
HVHCSVKAENSVAAKSGGCFPGWATVRLEQGGTKRVRDLRPGDRVLAADEQGRLLYSDFL
AFLDRDDGATKLFYEIETREPRARLLLTAAHLLFVAPPNGTARTPAGAAFASSVRPGQRV
FVAAERAGAPRLLPATVHRVGLREEAAGAYAPLTAQGTILIDRVLASCYAVIAEHGWAHR
AFAPFRLGHALLGTLAPARPELRGGAGGAEAEAEARAPGAAGVHWYSRLLYRLGTWLLDS
DALHPLGMAAAAAS
NT seq 1305 nt   +upstreamnt  +downstreamnt
atgctgctgccagcggcgagatgtttgctcctactgctcagctactccatgctggcgcgc
cctgggctggcctgcggacctggcaggggcttcgggaaaaggcggcaccccaaaaagctg
acccctctagcctacaagcagttcattcccaacgtggcggagaagaccttaggagctagc
gggaggtatgaagggaagatctccagaaactcggagcgattcaaggaactcacccccaat
tacaaccctgacatcatattcaaggatgaggaaaacacgggagcagaccgcctgatgact
cagagatgcaaggacaagctgaacgcgctggccatctccgtgatgaaccagtggccgggc
gtgaagctgcgagtgaccgagggctgggacgaggacggccaccactcggaggagtcgctg
cactacgagggccgcgctgtggacatcaccacgtcggaccgtgatcggggcaagtacggc
atgctggcgcgcctggcggtggaggccggcttcgactgggtgtactacgagtccaaggcg
cacgtccactgctccgtgaaagcagagaactcggtggcggccaagtccggcggctgcttc
cccggctgggccacggtgcgcctggagcagggcggcacgaagcgcgtgcgggacctgcgg
cccggcgaccgcgtgctggcggccgacgagcagggccggctgctctacagcgacttcctg
gccttcctggaccgcgacgacggcgccacgaagctcttctacgagatcgagacgcgcgag
ccgcgggcgcgcctgctgctcacggccgcgcacctgctcttcgtcgcgccgcccaacggc
acggcgcggaccccggcgggcgccgccttcgccagcagcgtgcggcccggccagcgcgtc
ttcgtggcggccgagcgcgccggggccccgaggctgctgccggccaccgtgcaccgcgtg
gggctgcgcgaggaggcggcgggcgcctacgcgccgctcacggcgcagggcacgatcctc
atcgaccgggtgctggcgtcctgctacgcggtcatcgccgagcacggctgggcgcaccgc
gccttcgcgcccttccgcctgggccacgcgctcctggggacgctggcgcccgcgcggccc
gagctccgcggcggggccggcggggccgaggccgaggccgaggcgcgggctcccggcgcc
gccggcgtgcactggtactcgcggctgctctaccggctgggcacctggctcttggacagc
gacgcgctgcaccccctgggcatggccgcggccgccgccagctga

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