Suncus etruscus (white-toothed pygmy shrew): 126025525
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Entry
126025525 CDS
T09902
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04621
NOD-like receptor signaling pathway
setr05132
Salmonella infection
setr05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
126025525 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
126025525 (NOD1)
05133 Pertussis
126025525 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
setr04054
]
126025525 (NOD1)
Pattern recognition receptors [BR:
setr04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
126025525 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
CARD
NLRC4_HD2
LRR_4
NOD2_WH
AAA_16
AAA_22
AAA_25
Motif
Other DBs
NCBI-GeneID:
126025525
NCBI-ProteinID:
XP_049641281
LinkDB
All DBs
Position
13:complement(3525469..3548574)
Genome browser
AA seq
950 aa
AA seq
DB search
MPGLAEMDQGPSVAQSYGKVLKTHREHLVAHIGNTQCLLDNLLENGYFTAEDVEIVGAYA
TKPSQVRQILDLVQSKGEEVAEFLLHVLQQLTDAYVDLRPWISQIGFSPSHVIQSKSVLN
TDPVSRYTEKLRHQLGRDSKFIMCYAQKEEMPLEELYVDTTAELVNFSDESLGSLGNVAG
LLDPVAGVLNEQAETIFVVGDAGVGKSMLLLRLQSLWAAGQLDTGLKFSFHFRCRTFSCF
QPSASMLLKDLLFQHFCYPEQDPDEVFAFLLRFPQTILFTFDGLDELHSDFDLSRAPEAC
SPWEPAHPLVLLASLLAGKLLQGARKVLTARTGTHLPRPLLRKKVHLRGFSPSHLRIFSQ
RMFPDRAMHGRLLEQLDANPSLGSLCAVPLFCWIIFRCFQHFQGAPDRARQLPSCNLTLT
DIFLLVTEVHLNRTQPTSLVQRNTRSRTETLRAGRPTLLALGRVARQGLEKNLFVFSQED
MQASEIQEQDLQLGFLRAGQELGLDGVQPTFEFFHLTLQAFLAAFFLVVDDKVGTREMLC
FFQEWAPPRKDGPPASSCLPWPRWLRGRGMAREDPFQKKDHFQFTNLFLCGLLSKGRQRL
LQHLVPAAALRRKRRALCAHLFASLRTYLKGLPRVETGGFNQVQAMPTFLWMTRCIYEMQ
SEKVGQLAAKGICANYLKLTYCNAHSADCSALSFVLNHFHKHLALDLDNNNLSDYGVREL
QPCFSRLTVIRLSVNQITDDGVKVLYEEVPKYKILTYLGLYNNQITDVGASYVARILEEC
ESLTHLKVGANKITSKGGKCLALAVKKSKFIFDVGMWGNKIGDEGARAFAEALRNHPSLT
NLSLAFNGISTEGGKSLAQALQQNTTLRIFWLTKNELNDEAAVGFAEMLKVNQTLQHLWL
IQNKITVRGVAQLADALQENTGLKEICLNGNLIKQEEASLFEGDKRIICF
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccaggccttgctgagatggatcagggaccaagtgtggcccagtcctatgggaaggta
ctgaagactcaccgggaacatctggtggcgcacattggcaacacccagtgcctgctggac
aacttgctggaaaatggctacttcaccgctgaagacgtggagattgtgggcgcctatgcc
acgaagcccagccaggtgcgtcagattctggacctggtgcaaagcaagggcgaggaagtg
gccgaattcctccttcacgtgctacagcagctcacagatgcctacgtggacctcaggccc
tggatctcccagataggcttctccccttcacatgtcattcaaagcaaaagtgtcctcaac
acagacccagtgagcagatacacggagaagctgcgtcaccaactgggtcgcgattccaag
ttcatcatgtgctatgcgcagaaggaggagatgcccctggaggagctgtacgtggacacg
acagccgagctggtcaacttcagcgacgagagcttgggcagcctgggcaacgtcgcgggg
ctcctggacccggtggcgggcgtcctgaacgagcaggctgagaccattttcgtggtgggc
gacgcaggcgtgggcaagtccatgctcctgctgcggctgcagagtctctgggccgcaggg
cagctggacacaggcctcaagttctccttccactttcgctgccgcaccttcagctgcttc
cagcccagtgcatcgatgctgctgaaggacctgttgttccagcacttctgctatccggag
caagaccccgatgaggtgttcgcctttcttctgcgcttcccccaaaccatcctcttcacc
ttcgacggcttggacgagctgcattcagactttgacctgagccgagcacctgaagcctgc
tcgccctgggagcctgcacacccgctggtgctgctggccagcctcctagctggaaagctg
ctgcagggtgcccgcaaggtgctgaccgcgcgcacgggcactcatctcccgcgtccactc
ctgcgcaagaaggtgcacctgcgaggtttctctcctagtcacctgcgcatcttctcccaa
aggatgttcccagaccgggccatgcatggccgtctcctggagcaactagatgccaacccc
agcctgggcagcttatgcgccgtgccactcttctgctggatcatcttccgctgcttccag
catttccagggcgcgcccgaccgggcccgacagctgccctcctgcaacctgactctcacg
gacatcttcctgctggtcaccgaggtccacctgaaccgaacgcagcccaccagcctggtc
cagcgcaacacgcgcagccggacggagacattgcgcgctggccggcccacgttgctcgcc
ctgggccgcgtggcccgccagggcctggagaaaaacctctttgtcttcagccaggaggac
atgcaggcgtctgagattcaggagcaggacttgcagctgggctttctgagggccggacag
gagctgggcctggatggagtccagcccacctttgagttcttccacctgacgctccaggct
ttcctggcggccttcttcctcgtggtggatgacaaggtgggcacgagggagatgctctgc
tttttccaagagtgggcaccccccagaaaggatggaccccctgccagctcctgcctccca
tggccccgatggctgaggggtcggggcatggccagggaagaccctttccagaagaaagac
cacttccagttcaccaacctcttcctatgcgggctgctgtccaagggccgacagcggttg
ctgcaacatctggtgcctgctgcggcactcaggaggaagcgccgggcgctgtgtgcccac
ctcttcgcaagcctgcgcacctacctgaaggggctcccccgcgttgagaccgggggcttc
aaccaggtgcaggccatgcccaccttcctctggatgacacgctgtatctatgagatgcag
agcgagaaggtagggcagctggcggccaagggcatttgtgccaactacctcaagctaacg
tactgcaatgcccactcggccgactgcagcgccctctccttcgtgctgaaccatttccac
aagcacctggctctggacctggacaacaacaacctcagcgactatggtgtgcgcgagctg
cagccttgtttcagccgcctcacggtcatcagactcagtgtgaaccagatcacggatgat
ggggtgaaggtgctctacgaagaggtgcctaagtacaaaattctcacctacttagggtta
tacaacaaccagatcactgatgtaggagccagctatgtggccagaatccttgaagagtgt
gaaagcctcacacacctcaaagtgggagcaaacaaaataacaagcaaaggtgggaagtgt
ctcgctctggctgtgaagaaaagcaagttcatcttcgatgttgggatgtggggcaacaag
atcggagatgagggagcccgggcttttgcagaggcactgagaaaccaccccagcctgacc
aacctgagtctcgcattcaacggcatctcaacagaaggaggaaagagcctcgcacaggcc
ctgcagcagaacacaactctccgaatattctggctcaccaaaaatgagctcaatgatgaa
gctgcagtgggttttgcagaaatgctgaaagtcaaccagacattgcagcatttgtggctg
atccagaataagatcacagtcaggggggtagcccagctggcagatgcattacaggagaat
actggcttgaaggagatatgcctcaatggaaacttgataaagcaagaagaagccagtctc
tttgaaggtgacaagcggattatttgtttctga
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integrated database retrieval system
