Suncus etruscus (white-toothed pygmy shrew): 126025541
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Entry
126025541 CDS
T09902
Symbol
RNF13
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13 isoform X1
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126025541 (RNF13)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126025541 (RNF13)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126025541 (RNF13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
Neur_chan_memb
DUF7027
Prok-RING_4
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
126025541
NCBI-ProteinID:
XP_049641304
LinkDB
All DBs
Position
13:complement(17837994..17936980)
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AA seq
381 aa
AA seq
DB search
MLLSLGMLMLSATQVYTLLTVQLFAFLNLLPVEADILAFDFDNASQTFDDLPARFGYRLP
AEGLKGFLINSKPENACEPIAPPPVRDNSSGTFIVLIRRLNCNFDVKVLNAQRAGYRAAI
VHNVDSDDLISMGSNDIDVLKKISIPSVFIGESSANSLKEEFSYEKGGHIILVPEFSLPL
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGDEYDVC
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTESSQ
EENEVSENTPLLRPVASASTQSFGALSESHSHHNMTESSDYEDEDNEDSDSSEAENEVNE
HSVVVQLQPNCDRDYSVANTV
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgcttctgtccctcggaatgctcatgctgtcggccacgcaggtctataccctgctcact
gtccagctcttcgccttcctgaatctcctgcccgtggaagcggacattttagcatttgac
tttgacaatgcatctcagacctttgatgatctcccggccaggtttggctatcggcttcct
gctgaaggcttaaagggttttctgattaattcgaagccagagaatgcctgtgagcccatt
gcgcctccacctgtgcgagacaactcttctggtaccttcattgtactcattcgaagactc
aactgtaacttcgatgtcaaggtcctaaatgcccagcgggccgggtacagagcggccata
gttcataatgtcgactccgatgacctcattagcatgggatccaacgacattgatgtgcta
aagaaaattagcattccgtccgtttttattggcgaatcttcagcaaattcactgaaagag
gaattctcatatgaaaaagggggccacattatcctagttccagaattcagtcttccactg
gaatactacctgatcccattccttatcatagttggcatctgtctcatcctgatagtaatt
ttcatgatcacaaaatttgtccaggacagacacagagctagaagaaacagattacgtaaa
gatcaacttaagaagcttcctatacataagttcaagaaaggagatgaatatgatgtctgt
gccatttgtttggatgaatacgaggatggagacaaactgagaatccttccctgttcccat
gcataccactgcaagtgtgtagacccttggctaactaaaacgaaaaagacctgtcccgtc
tgcaagcagaaagtagttccttcccagggagattccgactcagacacagagagcagccag
gaagaaaatgaggtgtctgaaaatacccctctcctaagacctgtggcatctgccagtacc
cagtcatttggggctttgtcagaatcccactcacaccacaacatgacagaatcttcggac
tatgaggatgaggacaacgaagacagtgacagcagcgaggccgaaaatgaagtgaacgaa
cacagcgttgtggtccagctgcagcctaactgtgacagggactacagtgtcgctaacacc
gtgtga
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integrated database retrieval system
