Suncus etruscus (white-toothed pygmy shrew): 126025642
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Entry
126025642 CDS
T09902
Symbol
WDR4
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126025642 (WDR4)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
126025642 (WDR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
126025642
NCBI-ProteinID:
XP_049641390
LinkDB
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Position
13:complement(98048574..98054773)
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AA seq
406 aa
AA seq
DB search
MAVSAGLTLCGSLLVVRGGSRFLATDTASSNGGVLFTYDCSAAEKPPESKGEDGQPVDRG
SDTILACAFSASSSYFALTDDRKRLILFHTRPWRCLGVRSVARRCTALTFTASEEKVLVA
DKSGDVYSFLVQEPNAHGHLELGHLSMLLDVAISPDDRFILTADRDEKIRVSWAVAPHSI
EAFCLGHTEFVSRILVPPDNPELLLSTSGDGTLRLWEFSRGCELCCCPLASLREPRDTSE
HQRVAASRLAYWRGEGCVALLCEGLSAVAIFRLLGSQRRLVLEQQLPLQHRAWDLGFEDG
RGLWVLQDCADTPLLLCRPHGGQWQFVPDDSVLKTISGLLREEWAILGGSAGQDPSLSSL
YKAACDNMTAYLQRKEQRLLQRKRRRDASPGTPTRLHTGDAALGCS
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccgcggggctaacgctgtgcgggtccttgctggtggtgcggggcggcagc
cgcttcctggccaccgacaccgcgagcagcaatggtggtgtccttttcacctacgactgc
agcgctgcggagaagcccccggagagcaaaggggaggatgggcaacccgtggacagaggg
agcgacacaatcctggcctgtgccttctcggcgtccagcagctacttcgctctaacggac
gacaggaagcgcctgatccttttccataccagaccgtggcggtgtctgggcgttaggagc
gtggcaaggcgctgcacagccttgaccttcacggcgtctgaggagaaggttctggtggcc
gacaaatcaggggacgtctactccttcttggtgcaggagccgaatgcccacggccacctg
gagctgggccacctgtccatgctgctggatgtggccattagccctgatgaccgcttcatc
cttacggctgaccgggatgagaagatccgggttagctgggccgtggccccgcacagcatc
gaggccttctgcttggggcatacggagttcgtgagtcgcatcctggtgccccccgacaat
cccgagctgctgctgtccacctctggggacggcaccttgaggctctgggagttcagtcga
ggctgtgagctgtgctgctgccccttggccagcctgcgggagcccagggatacctcggag
caccagcgggtggccgcctccaggctggcgtactggcgcggggagggctgtgtggcactt
ctctgcgagggcctttctgccgtcgccatcttccggcttcttgggtcccagcgccggctg
gttctggaacagcagctcccgctacagcaccgcgcatgggacctgggcttcgaggacggc
cgtgggctgtgggtgctgcaggactgcgcggatacccccctcctgctctgcaggccccac
ggcggccagtggcagtttgttcctgatgactctgtgctgaagaccatctccggcctcttg
cgtgaagagtgggccattctggggggctccgcgggccaggaccccagcctgagcagcctc
tacaaggccgcctgcgacaacatgactgcgtacctgcagcgcaaggaacagcggctgctg
cagagaaagcggcgccgggatgcgtcacctggaacccccacacggctgcatacaggggac
gcagccctgggctgttcctag
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