Suncus etruscus (white-toothed pygmy shrew): 126025669
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Entry
126025669 CDS
T09902
Symbol
LSS
Name
(RefSeq) lanosterol synthase
KO
K01852
lanosterol synthase [EC:
5.4.99.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00100
Steroid biosynthesis
setr01100
Metabolic pathways
Module
setr_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
126025669 (LSS)
Enzymes [BR:
setr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.7 lanosterol synthase
126025669 (LSS)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
126025669
NCBI-ProteinID:
XP_049641420
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Position
13:complement(99373477..99399344)
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AA seq
733 aa
AA seq
DB search
MTDGTCLRRRGGPWPTPPATDLGRWRLRCEVGRQTWTYLREDEAAEREQTALEAHSLGLD
AKSYFKDLPKAHTAWDGAFNGMMFYKELQAEDGHWAGDYGGPLFLLPGLLITCHVARIPL
PAGYKEEMVRYLRSVQLPDGGWGLHIEDKSTVFGTALNYVALRILGIGPDNSYMVRARNL
LHKKGGAVFIPSWGKFWLAILNVYSWEGLNTLFPEMWLFPDWAPAHPSTLWCHCRQVYLP
MSYCYATRLSAEVDPLVQSLRQELYVEDYASINWSEHRNSVSPDDLYTPHSWLLHVVYSL
LNFYESHHSTSLRQRAIEKLYDHIAADDRFTKCISIGPISKTINMLVRWYVDGPSSSAFQ
EHVSRIPDYLWMGLDGMKMQGTNGSQIWDTSFAIQALLEASAEHRPELSSCLEKAHEFLR
ISQNPDNFPDYQKYYRQMCKGGFSFSTVDCGWIVSDCTAEALKAVLLLQEKCSFITKHIP
RERLFDAVAVLLKLRNSNGGFATYETKRGGILLELLNPSEVFGDIMIDYTYVECTSAVMQ
ALTLFHSQFPDHRAEEIRDTIKQGLSYCGKIQRADGSWEGSWGVCFTYGTWFGLEAFACM
GQVYHDGVACAEVTRACDFLLSKQMADGGWGEDFESCEQRRYVQSSGSQVHNTCWALMGL
MAARHPDVAALERGIRCLLSKQRSNGDWPQENIPGVFNKSCAISYTNYRNVFPIWTLGRF
SQLHPESDLAGHP
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacggacggcacgtgcctgcgccgccgagggggcccctggcccacgccgcccgccacc
gacctgggccgctggcgcctgcgctgcgaggtgggccgccagacgtggacctacctgcgg
gaggacgaggcggccgagcgcgagcagacggcgctggaggcccactcgctggggctggac
gccaagagttacttcaaggacctgcccaaagcccatacagcctgggatggtgccttcaat
gggatgatgttttacaaagaactgcaggctgaggacgggcactgggccggcgattatgga
ggaccactcttcctcctgccaggcctcttgatcacatgccatgtggcacgtatccctttg
ccagctggatacaaagaagagatggtgcggtacctgcgctcagtgcaactacctgatggc
ggctggggcctgcacattgaggacaagtctacggtgtttgggactgcgttgaactatgtg
gctctgagaattctgggcattgggcctgataattcttacatggtacgagcccggaacctt
cttcataagaaaggcggtgctgtttttatcccctcttggggaaaattctggctggctatc
ctaaatgtttacagctgggaaggcctcaacactctgtttccagaaatgtggttgtttcct
gactgggcgcctgcacacccttctacactctggtgccattgccggcaggtctacctgccc
atgagctactgctatgctactcggctgagtgctgaagtggacccattagttcagagcctt
cgccaggagctctacgtggaggactacgccagcatcaactggtcagaacacaggaacagt
gtgtcccctgatgacctgtacacaccccacagctggctgctccatgtggtatacagcctc
ctcaacttctatgagagccatcacagcacaagcctgcggcagcgggccatcgagaagctg
tatgaccacatcgcagctgacgatcgcttcaccaagtgcatcagcatcgggccgatctca
aaaaccatcaacatgcttgtgcgctggtatgtggatgggccatcctcctctgctttccag
gagcacgtttccaggattcctgactacctctggatgggcctcgatggcatgaaaatgcag
ggcaccaacggctcacagatctgggacacttcatttgcaattcaggcactactggaggcc
agtgcagaacataggcctgaattgtcgtcctgtttggaaaaggcgcatgaatttctccgg
atctcacagaatccagacaactttcctgactaccagaagtactaccgacagatgtgtaag
ggtggcttctccttcagcactgtagattgtggctggattgtttccgactgcacagctgag
gccttgaaggctgttcttctccttcaagaaaagtgttcctttatcaccaagcatatcccc
cgagaacgactctttgacgctgttgctgtgttgctgaaattgagaaattccaatggagga
tttgccacctatgagaccaagcgtgggggcatcttgctggagctgctgaacccctcagag
gtctttggagacatcatgatagactacacatatgtggaatgtacctcggctgtgatgcag
gcactgacgcttttccactctcagtttccagatcacagagctgaggagatcagggacacc
atcaagcagggcctatcatactgtgggaagatacagagggctgatggctcctgggaagga
tcctggggagtctgtttcacctatggcacctggtttggactggaagcatttgcctgcatg
gggcaggtctatcatgatggggtggcctgtgcagaagtcacccgggcttgtgactttctg
ctgtccaaacagatggcagatggcggctggggggaggacttcgagtcctgtgagcagcgt
cgctatgtacagagcagtgggtcccaggtccataacacctgctgggccctaatggggtta
atggctgccaggcatcctgatgtagcagcccttgagagaggaatcaggtgtctgcttagc
aagcagcgctccaatggcgactggccccaggagaacatccctggagtcttcaacaagtcc
tgtgccatcagctacacaaactatagaaatgtcttccccatctggacccttggccgcttc
tcccaactacatcctgagagtgacctcgctggccacccctga
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