Suncus etruscus (white-toothed pygmy shrew): 126025749
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Entry
126025749 CDS
T09902
Symbol
SMC4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126025749 (SMC4)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
126025749 (SMC4)
Condensin II
126025749 (SMC4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
THOC7
ABC_tran
Motif
Other DBs
NCBI-GeneID:
126025749
NCBI-ProteinID:
XP_049641484
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Position
13:complement(24860912..24894171)
Genome browser
AA seq
1281 aa
AA seq
DB search
MPRRGPPAGSTARRHAAARDEAPPSPDGSGDDAGPEPPTEPPAEEIDDRTPEEILSSIPP
PPPPAMTNEPGAPRLMITHIVNQNFKSYAGEKVLGPFHKRFSCIIGPNGSGKSNVIDSML
FVFGYRAQKIRSKKLSVLIHNSDEHKDIQSCTVEVHFQKIIDKEGDDYEVVPNSNFYVSR
TAYRDNTSVYHISGKKSTFRDVGNLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHD
EGMLEYLEDIIGCGRLNEPIKVLCRRVEILNEHRGEKLNRVKMVEKEKDALEGEKNAAIE
FLTLENEIFKKKSHVCQYYIYDLQKRIAEMENQKEKIDEDTKEINEKSSKLSNDMKAKNK
AVKDVEKKLNKITDFIEKNKEKFTQLDLEDVQVREKLKHATSKAKKLEKQLLKDKEKVEE
FKSVPAKSEKIIAETTTRSNALEKEKEKEEEKLKQVMDSLKQETQGLQKEKESQEKELMA
FSKSVNEARSKMDVAQSELDIYLSRHNTAVSQLSKAQEALVTASETLKERKAAIREIEAK
LPQNKQELKQKEQKLKELTQEEINVKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEK
NSGRIPGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKRKNIGVAT
FIGLDKMAVWAKRMSKIQTPENTPRLFDLVKVKDEQIRQAFYFALRDTLVADNLDQATRV
AYQGKQRWRVVTLQGQIIEQSGTMTGGGSRVTKGRMGSSVIMEVSEEQVNKMELQLQKDS
LKATQIQEQKVQLEETVLKLQQSERDMRNTLEKFTASIQHLSEQEEYLTVQVKELEANVL
ATAPDKKKQKLLEENVSAFKIEYDSVAKRAGKVEAEVKRLHDLIIEINNHKLKAQQDKLD
KINKQLDECASSITKAQVSIKTADRNLKKAQDTVSRTEKEIKDTEKEVNDLTAELKSIED
KAAEVIQDTNSAEESLPEIQKEYRNLLQELKLIQENEHALQKDALSIKLKLEQLNGHIAE
HNSKIKYWQKEISKISLHPIENNPVEEISVLSPEDLEAIKNPDSITSQIALLEAQCHEMK
PNLGAIAEYRKKEELYLQRVAELDKITCERDHFRQAYEDLRKQRLNEFMAGFYIITNKLK
ENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGGEKTLSSLALVFAL
HHYKPTPLYFMDEIDAALDFKNVSIVAFYIYEQTKNAQFIIISLRNNMFEISDRLIGIYK
TYNITKSVAVNPKEIASKGLC
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgccgcgggccccccgccggcagcaccgcgcgccgccacgccgccgcccgggat
gaggcgccgccgagccccgacggctcgggcgacgacgcgggccccgagccccccaccgag
ccccccgctgaggaaatcgatgaccggaccccggaggaaattttgagcagcatcccgcct
ccgccgccgcctgccatgaccaacgagcccggggcgccccggctcatgatcacccacatt
gtgaaccagaacttcaagtcttacgcgggcgaaaaagtcctgggaccttttcataagcgt
ttttcctgtatcattgggccaaacggcagtgggaaatccaatgttatcgattctatgctt
tttgtatttggctaccgagcccaaaaaataagatctaaaaagctctcggttctgatacat
aattctgatgaacacaaggatattcagagttgtacggtagaagttcattttcaaaaaata
attgataaggaaggggatgattatgaagtcgttcctaacagtaacttctatgtatctaga
actgcttatagagataatacttcagtctatcacataagtgggaagaaatcaacatttagg
gatgttggaaatcttctccgaagtcatggaattgacttggaccataatagatttttaatc
ttgcagggtgaagttgagcaaattgccatgatgaaaccaaaaggccagacagaacacgat
gagggtatgcttgaatatctagaagatatcattggttgtggacgactaaatgaacctatt
aaagtcttgtgtcggagagttgaaatattaaatgaacatagaggagaaaagttaaacaga
gtgaagatggtagaaaaagaaaaggatgccttagaaggagagaagaatgcagccattgag
tttcttactttagaaaatgagatatttaaaaaaaagagtcatgtttgtcaatattacatt
tatgatctgcagaaacgaattgctgaaatggaaaatcagaaggaaaaaattgatgaagat
acaaaagaaatcaatgaaaagagcagtaaactgtctaatgacatgaaagcaaaaaataaa
gctgtgaaagatgtagagaagaaactcaataaaattacagattttattgagaagaacaaa
gaaaaatttactcagctggatttagaggatgttcaagttagagaaaaattaaagcacgct
acaagtaaagccaaaaaactggagaaacaacttctaaaagataaagaaaaggttgaagaa
tttaaaagtgtgcctgccaagagtgaaaaaattatagctgaaacaacaactcgaagtaat
gctctagagaaggaaaaagaaaaagaagaagaaaaattaaagcaagttatggatagcctc
aaacaggaaacacaagggcttcagaaagaaaaagaaagtcaagaaaaagaacttatggct
ttcagcaaatcagtaaatgaagcacgttccaagatggatgtagctcagtctgaacttgat
atctatctcagtcgtcataatactgcagtttctcagttaagtaaggcccaggaagctctc
gtcacagcctctgagactttgaaagaaaggaaagctgcaatccgcgagatagaggcaaaa
ctccctcagaataagcaggaattaaaacagaaagagcaaaaacttaaagagcttacacaa
gaagaaataaacgtcaaaagtttggttcatgatcttttccaaaaagttgaagaagcaaag
agttccttagcaatgaatcgaagtagggggaaagtccttgatgcaataattcaagaaaaa
aactctggcagaattccaggaatatatggacgattgggcgacttaggagcaattgatgag
aagtatgatattgctatttcttcttgttgtcacgcactagactacattgttgttgattct
attgatacagcccaagaatgtgtgaacttccttaaaagaaaaaatattggtgttgcaact
tttataggtttggataagatggcagtgtgggcaaagaggatgtcaaaaattcaaactcct
gaaaatactcctcgtttatttgacttagtaaaagtaaaagatgagcaaattcggcaagct
ttttactttgctttaagggacaccttagtggctgacaacttagaccaagccaccagagta
gcatatcaaggcaagcagcgctggagagttgtgaccttgcaaggccagatcatcgagcag
tcaggtactatgacaggtggtggcagcagagtgacaaaaggcaggatggggtcttcagtc
atcatggaggtctccgaagagcaggtaaataaaatggaattacagttacagaaagattct
ctaaaagcgacacaaatccaagaacagaaagtccaactggaagaaacagtacttaagtta
cagcagagtgagagagatatgaggaatacgctggagaagttcactgcgagcatccagcat
ttatcagagcaagaagaatatctgactgtacaagttaaagaacttgaagctaatgtacta
gctacagcccctgacaaaaagaagcagaaattactagaagaaaatgtcagcgctttcaaa
atagagtatgacagcgttgctaagagagctggtaaagtagaggctgaagttaaaaggtta
catgatctcatcattgaaatcaataaccataaactcaaggcacaacaagacaaactggat
aaaataaataagcagctggatgaatgtgcttcttccattactaaagcccaagtatcgatc
aagactgcagacagaaatcttaaaaaagcacaagacaccgtgtctcgcacagagaaagaa
ataaaagatactgagaaggaagttaatgatttaacagcagaactaaaaagtattgaagac
aaagcagcagaagtcatacaagataccaattctgccgaggaatctttaccagagatccag
aaagaatatcgcaatcttcttcaagaactgaaattgattcaagaaaatgaacatgctctt
caaaaagatgcactcagtattaagttgaaacttgaacaattaaatggtcatattgctgag
cataactctaaaataaaatattggcaaaaagagatttcaaaaatatcactgcatcccatt
gaaaataatcctgtcgaggaaatttcagttctaagcccagaggaccttgaagccatcaag
aaccctgattctatcacaagtcagattgcacttttggaagcccagtgtcatgaaatgaag
cccaacctcggtgccattgccgagtataggaagaaggaagaattatatttacaacgagta
gctgagttggacaaaattacttgtgaaagagatcatttcagacaggcatatgaagatctt
cggaagcaaaggcttaatgagtttatggcaggtttttatataataacaaacaaactaaag
gaaaattaccagatgctcactctggggggcgatgctgagctagaactagtggacagtttg
gaccctttctctgaaggcatcatgttcagtgttcggccaccaaagaaaagttggaagaag
atctttaacctttcaggaggagagaaaacactcagttcattggcattagtctttgctctt
caccattacaaacccacacccttgtacttcatggatgagattgatgcagcccttgatttt
aaaaatgtgtccattgttgcattttacatctatgaacaaacaaaaaatgctcagttcatc
atcatctcccttcgaaataatatgtttgagatttcagatagacttattggaatttacaaa
acatacaatataacaaaaagtgttgcagttaacccaaaagaaattgcatctaaaggacta
tgttaa
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