Suncus etruscus (white-toothed pygmy shrew): 126025915
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Entry
126025915 CDS
T09902
Symbol
AIRE
Name
(RefSeq) autoimmune regulator
KO
K10603
autoimmune regulator
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04120
Ubiquitin mediated proteolysis
setr05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126025915 (AIRE)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
126025915 (AIRE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
setr03000
]
126025915 (AIRE)
04121 Ubiquitin system [BR:
setr04121
]
126025915 (AIRE)
Transcription factors [BR:
setr03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
126025915 (AIRE)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126025915 (AIRE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
zf-HC5HC2H
PHDvar_NSD
zf-HC5HC2H_2
PHD_2
Motif
Other DBs
NCBI-GeneID:
126025915
NCBI-ProteinID:
XP_049641591
LinkDB
All DBs
Position
13:98531641..98538028
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AA seq
534 aa
AA seq
DB search
MAGDGHPGGDSVLRHLLRRHRTEIAVAVDSAFPLLHALADHDVVPDHKLQETLRLQERDG
CPRAVHALLSWLLTQDAPAVLGFWKVLFKDYNLERYKGLQRVLEGFPRDVDLSQPRKGRK
PPAAAPKASVPAPRPPAKRKAAEEPGATPPVAPAPGPSPGAHTKAKPPRKPESGADTPVL
PPGNGIQTVASVQRARGAVEGIVIQQVFESGGSKCVQVGGEFYGPGPLEEPGGGGGGGGK
SKARGGVGGHGGLKTVARARGPSGPASGGGDPGAAALPGEPSLHQKNEDECAVCRDGGEL
LCCDGCPRAFHLACLSPPLRGIPSGTWRCAGCLQRGGLWELPRTQEPSEGPTSTPVSLAL
RPVGEEPKSHPGDPRDATGTYRHLLTSTTPLTLLEPSALRPLLCGGPERLQGPSGARCGV
CGDGGNALRCALCAAAFHWHCHFPGAAPRPGAALRCKSCAPETGLAPGDRDGVPLPAPMA
PTPTKVGDEPAAQEPALHRDDLETMLSEHTFDGILQWAIQSMTRPLTETPTFPS
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggctggggacgggcaccccggaggggactcagtgctgcgtcatctgctaagacgtcac
cgcaccgagatcgccgtggccgtggacagcgccttccccttgctgcacgcgctggccgac
cacgacgtggtcccggaccacaagctccaggagaccctgcgcctgcaggagagggacggc
tgcccccgggccgtgcacgcgctcctgtcctggctgctcacccaggacgcacctgccgtc
ctgggcttctggaaggttctcttcaaggactacaacctggagcgctacaagggcctgcag
cgcgtcctggaggggttcccccgagacgtggacctgagccagccccggaaggggaggaag
ccccctgccgccgcccccaaggcctccgtgccggccccccggccccctgccaagaggaag
gccgccgaggagcctggggccaccccacccgttgcaccggccccagggcccagcccaggc
gcccacaccaaagccaagccccccaggaagccggagagcggcgcagacacgcccgtcctc
cctccgggcaacgggatccagaccgtggcctcggtccagagagcccgcggggcggtggag
ggcatcgtcatccagcaggtgttcgagtcaggcggctccaagtgcgtccaggtgggcggc
gagttctacggccccggcccgctcgaggagcccggcggcggcggcggcggcggcggcaag
agcaaggcccgcggcggcgtgggcggccacggcggcctgaagacggtggcccgagcccgg
gggccctcggggcccgcttccggcggaggtgaccccggggcggccgcgctccccggcgag
ccctcgctgcaccagaagaacgaggacgagtgcgccgtctgccgcgacggcggggagctg
ctctgctgcgacggctgcccgcgcgccttccacctggcctgcctgtcgcccccgctgcgc
ggcatccccagcggaacgtggaggtgtgcaggatgcctgcagagaggaggcctgtgggag
ctgccacggacccaggaaccctccgaggggccaacaagcaccccggtgagcctagcattg
aggccggtgggtgaggagcccaagagccaccccggggacccccgggatgctacggggact
taccggcacctgctgacctccacgaccccactgactctcctggagccctcggcacttcgg
cccctgttatgcgggggccctgaaaggctgcagggtccatcaggcgcacgctgcggggtg
tgcggggacggcgggaatgccctgcgctgtgccctctgtgctgctgcctttcactggcat
tgccacttcccaggagctgccccccggccgggggctgccctgcgctgcaaatcctgtgcc
ccagaaacaggcttggcccccggagacagagatggagtgcccctgcctgcccccatggcc
cccacgcccaccaaggtgggggacgagcctgcagctcaggagccagctttgcatagggac
gacctggagactatgctgagcgagcacactttcgacggaattttgcagtgggccatccag
agcatgacgcggcccctgactgagacacccaccttcccctcctga
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