Suncus etruscus (white-toothed pygmy shrew): 126025971
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Entry
126025971 CDS
T09902
Symbol
ALCAM
Name
(RefSeq) CD166 antigen isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
126025971 (ALCAM)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126025971 (ALCAM)
04090 CD molecules [BR:
setr04090
]
126025971 (ALCAM)
Cell adhesion molecules [BR:
setr04515
]
Immunoglobulin superfamily
Other
126025971 (ALCAM)
CD molecules [BR:
setr04090
]
Proteins
126025971 (ALCAM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
C2-set_2
Ig_2
I-set
ig
V-set
C1-set
C2-set_3
Ig_PDGFR_d4
DUF6377
FixQ
Podoplanin
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
126025971
NCBI-ProteinID:
XP_049641639
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All DBs
Position
13:85718260..85934831
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AA seq
583 aa
AA seq
DB search
MASKATPSCRLVFSLLITAAVLRPGLGLYTVNSAYGDTIILPCRLDVPQNLMFGKWKYEK
PDGSPVFIAFRSSTKKSVHYDNVPEYKDRLSLSENYTLSISNARIGDEKRFVCMLVTEDN
VFEAPTVVKVFKQPSKPEIVSKASFLETEQLKKLGDCVSEDSYPDGNITWYRNGKVLQPL
ERAVVIIFTKQMDPVTQLYTMTSSLEYKATKADIQMPFTCSVTYYGPSGQNTLYSEQAVF
DIYYPTEQVTMQVLPPKNAIKEGDNITLKCLGNGNPPPEEFLFYLPGQPEGIRSSNTYSL
ADVRRNATGDYKCSLIDKKSMIASTVITVHYLDLSLNPKGEVTKQIGDTLPVSCTISASR
NATVVWMKDNIKLRSSPTFSSLHYQDAGNYVCETALQEVEGLKKRESLTLIVEGKPQIKM
TKKTDPSGLSKTIICHVEGFPKPAIQWTITGSGSVINQTEESPYINGRYYSKIIISPEEN
VTLTCTAENQLERTVNSLNVSAISIPEHDEADEISDENREKVNDQAKLIVGIVVGLLLAA
LVAGVVYWLYMKKSKSASKHVNKDLGNMEENKKLEENNHKAEA
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaaggcaaccccctcctgccgtctggtcttcagcctcttgatcacagctgct
gtcctcaggccaggccttggattgtatactgtaaattcagcatatggagataccattatc
ttgccttgccgactggatgtacctcagaatctcatgtttggcaagtggaaatatgagaag
cccgatggctcccctgtatttattgccttcagatcctctacaaagaaaagtgtacattat
gacaatgtgccagaatacaaagacagattgagcctctcagaaaactacactttatctatc
agtaatgcaagaatcggtgatgaaaagagatttgtgtgcatgctagtaactgaggacaac
gtgtttgaggcgcctacagtcgtaaaggtgttcaagcagccatccaaacctgaaattgta
agcaaagcgtcatttcttgaaacagagcagctgaaaaagttgggagactgtgtttctgaa
gacagttatccagatggcaatatcacatggtacagaaatggaaaagttctgcaacctctt
gaaagagcagtggttataatatttacaaaacaaatggacccagtgactcagctatatacc
atgacttcatccctggaatataaagcaactaaggctgacatccaaatgccattcacctgc
tctgtgacatattatgggccatctggccagaacacactttattctgaacaagcagttttt
gatatttactatccaacagaacaagtgacaatgcaagtattgccaccaaaaaatgccatc
aaagaaggggacaacatcactcttaaatgtttgggaaatggtaaccctcctcctgaggag
tttttattttacttgccaggacagcctgaaggaataagaagctcaaatacttactcattg
gcagatgtgaggcgcaatgccacaggagactacaaatgctctctgatagacaaaaaaagc
atgattgcttcaacagtcatcacagttcactatttggatttgtctttaaacccaaaaggg
gaagtgactaaacagattggtgatactctgcccgtgtcatgcacaatatctgctagtagg
aatgcaactgtggtctggatgaaagataacatcaagcttagatcaagtcctacattctcc
agtcttcattatcaggatgctggaaactatgtctgtgaaacagctcttcaggaggttgaa
ggactaaagaaaagagagtctttgactctcattgtagaaggaaagcctcaaatcaaaatg
acaaagaaaactgatcccagtggactgtctaaaacaataatctgccatgtggaaggtttt
ccaaagccagccatacagtggacaattactggcagtggaagcgtcataaaccaaactgag
gaatcaccttatattaatggcaggtattatagtaaaattatcatttcccctgaagaaaat
gttacattaacttgcacagcagaaaaccagctggagagaacagtaaactccttgaatgtc
tctgctataagtattccagaacacgatgaggcagacgagataagtgatgaaaatagagaa
aaggtgaatgaccaggcaaaattaattgtgggcatcgttgttggcctcctccttgctgct
cttgttgctggtgttgtctactggctctacatgaagaaatcaaaatctgcatcaaaacat
gtaaacaaggaccttggtaacatggaggaaaacaaaaagttagaagaaaacaatcacaag
gcagaagcttaa
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