Suncus etruscus (white-toothed pygmy shrew): 126026037
Help
Entry
126026037 CDS
T09902
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
setr03021
]
126026037 (SCAF4)
03041 Spliceosome [BR:
setr03041
]
126026037 (SCAF4)
Transcription machinery [BR:
setr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
126026037 (SCAF4)
Spliceosome [BR:
setr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
126026037 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
126026037
NCBI-ProteinID:
XP_049641705
LinkDB
All DBs
Position
13:44520294..44583690
Genome browser
AA seq
1154 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSDVPQTTTNSIAAVPQLP
SSDAFAAVAQLFQSTQSQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAMTAQLKTAPAQT
PDQKAALPAPEQKTTFDKKLLDRFDYDDEPEAMEESKKEDAAASTAPVATGPPVLATAMP
AAATAPATSPPQAPYGFPGDGMQQPAYAQPQAMDHFQPRMMPVQQDPVHHQVWEVVPPNG
QMPGFGLLAAPPFPTMAQPVIPPPPVQPPFQASFQAQNEPLTQKAHQEMEVEQPCIQEVK
RHISDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDRE
KERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGC
AYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYVPWD
KVKPEELESFCEGGILDSDTLNPDWKGISKKPENEVAQNGGAEPSHTEPVSPIPKPLPVP
VPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPAFTPPMGIPPPGFGPGVPPPPPPPPFL
RPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPI
PTVVSGARGNAESGDSAKMYGSAAPPAAPTNLPTPPVTQPVSLLGTQGVGPGPGPGPGPG
PGPVVGIQAPSTGLLGARPGLIPLQRPPGMPPPHLQRFPMMPPRPMPPHMMHRGPPPGPG
GFGMPPPHGMKGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQPPPQQQQQPPPPQP
QQPPPTQQPPTQQPQQQQQQQPPPPPPQGFRNEGRQQFSAGRDQERFGRRSFGNRVENDR
DRYGNRNDDRENSTRDRREWGRRTPDRDRHRDLEDRNRRCSSHRDRERDSRDRESRREKE
ENRGKEKSEVTDRAAANKTLEPPPRPAGPVDPIPELAKGEAEAAGVKPTEEPPVAATSSI
DPEKDSSSVAEAPR
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcactcatggatatgaaacctccc
atctctcgagccaagatgatacttataacaaaagctgctattaaggctattaagctttat
aagcatgtagttcaaatagtagagaagttcatcaaaaagtgtaagcctgaatataaagtt
ccaggattatatgtaattgactcaattgtacgacagtctcgtcatcaatttggaactgat
aaagatgtttttgggccaagattctctaaaaatataaccgccacattccaatatttgtat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctaaacctctggcagaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggcagcaggaaccagtaat
gctgccccagtagcagaaaatgtgactaataatgaaggttcaccgccacctccagttaaa
gtttcttctgacgtcccacaaaccactacgaactctatagcagcagtaccacagctgccc
agttctgatgcttttgctgctgtagctcaactgtttcagtcaacacaaagccaacagctt
cagcagatccttcagacttttcagcagcctccaaaaccacagtctcctgctattgacaat
gctgtgatggctcaggttcaggcaatgacagctcagttgaagacagctcctgcacaaaca
ccagaccagaaggctgctctccctgctcctgaacagaaaaccacctttgacaagaagcta
cttgataggtttgattatgatgatgagccagaagctatggaagagtccaagaaagaagat
gctgctgccagcactgcgcctgttgctactgggcctcctgttctggcgactgctatgcct
gctgctgccacagcacctgccacttctcctccacaggcaccatatgggtttcctggagat
ggcatgcagcaaccagcatatgcacagccgcaagctatggatcattttcagcctcgaatg
atgccggtacagcaggatccagtacaccatcaggtatgggaagtggttcctcctaatgga
cagatgccagggtttggccttcttgcagcacctccatttcctaccatggcccagcctgtg
attccccctccacctgtgcaaccacctttccaggcttcttttcaagcacagaatgaacca
cttacgcagaaggcacatcaggaaatggaagtggaacaaccttgcatccaagaggttaag
cgacatatatctgataatagaaagtcaagatctaggtcagcatcgaggtcaccaaaaagg
aggcggtcccgatcaggttctagatcacgaaggtctcgacatcgacgttctagatctcga
tccagggatagacgcagacattctcctagatctcgatcccaagaaagacgggatcgagaa
aaagaaagagaacgccgacagaaaggccttcctcaaatcaaaccagaaactgctagtgtg
tgtagcactacactttgggtgggacagctggacaaaaggactacccaacaggacgttgcc
agtctattggaagagttcggtccaattgaatcaattaatatgattcctcccagaggttgt
gcctatattgttatggttcataggcaagatgcctatcgtgccctgcagaaattgagccga
ggaaattataaagtgaaccagaaatctataaagattgcctgggccttaaacaaaggaatc
aaggcagattataagcagtattgggatgtagaacttggtgttacttatgttccatgggac
aaagtcaagcctgaagaactggagagcttttgtgaaggaggaattttagacagtgataca
cttaatccagattggaaaggaatttccaagaaacccgaaaatgaggttgctcagaatgga
ggagcagaaccctcgcacactgaaccagtatcacctatccctaaacctttacctgtgcct
gtccctcctatcccagttcctgcacctataacagtccctcctccacaggtcccaccacat
cagccaggcccacctgtcgttggtgctctccaaccaccagctttcacgcctccaatggga
attccccctcctggctttggccctggtgtccctccgccaccgccccctccaccatttttg
cgtccaggattcaatccaatgcatttgccaccaggttttcttcctcctggacccccacct
cctataactccaccagtatccattcctcctcctcacactcctccaataagcatcccaaac
tccactatcgctggtataaatgaagacactacaaaagacttatctattggaaatcccatt
ccaacagtggtatctggggctagaggaaatgccgaatctggtgacagtgcgaaaatgtat
ggttctgctgcgccacctgctgcacccacgaatctgcccaccccgcctgtaacccagcct
gtttcgcttcttggtactcaaggagttggacctggacccggacccggacccggacctgga
cctggacccgtcgttggaatccaggccccatctaccggtcttctcggtgcacggcctggc
ctcatcccactccagcgccctccgggaatgcctccccctcacctacagcgcttccctatg
atgccacctcggcccatgccaccacacatgatgcatcgaggtccacctccgggtcctggg
ggcttcggcatgcctccccctcatggaatgaaagggcccttcccaccccatggccctttc
gtcagacccggtggcatgccggggctcggaggcccagggcccggtcctggtggtcctgaa
gacagggacggccggcagccaccacctcaacagcagcagcagccgccaccaccacagcca
caacagccgccaccaactcagcaaccaccaacgcagcagccacagcaacaacagcagcag
cagccgccgccaccaccaccacaaggatttcgaaatgaaggcaggcagcaattcagtgca
gggagagaccaggagaggttcggccgcagatcattcgggaatcgggtggagaacgaccgt
gaccggtatgggaaccggaatgatgaccgagagaacagcacgcgtgaccggagagaatgg
ggaaggcggacccccgaccgggacaggcacagagacttggaggacaggaacagacgctgt
agcagccaccgagaccgagaaagagattcgagagatcgagagtctcgtagagagaaggag
gagaaccgagggaaggaaaagtcagaggtgacagacagggcagctgctaacaaaaccctc
gagcctcctcctcgcccagcaggccctgtcgaccctatccctgaactggccaagggggag
gccgaggcggcgggtgtcaagcccaccgaagagcctcctgttgcggctacctcctccatt
gatcccgagaaggattccagttccgtagctgaagctccacgctag
DBGET
integrated database retrieval system
