Suncus etruscus (white-toothed pygmy shrew): 126026048
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Entry
126026048 CDS
T09902
Symbol
APP
Name
(RefSeq) amyloid-beta precursor protein isoform X1
KO
K04520
amyloid beta A4 protein
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04726
Serotonergic synapse
setr05010
Alzheimer disease
setr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
126026048 (APP)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126026048 (APP)
05022 Pathways of neurodegeneration - multiple diseases
126026048 (APP)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
setr01002
]
126026048 (APP)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
setr00535
]
126026048 (APP)
00536 Glycosaminoglycan binding proteins [BR:
setr00536
]
126026048 (APP)
Peptidases and inhibitors [BR:
setr01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
126026048 (APP)
Proteoglycans [BR:
setr00535
]
Cell surface proteoglycans
Others
126026048 (APP)
Glycosaminoglycan binding proteins [BR:
setr00536
]
Heparan sulfate / Heparin
Others
126026048 (APP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
Kunitz_BPTI
Insulin_TMD
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
126026048
NCBI-ProteinID:
XP_049641719
LinkDB
All DBs
Position
13:51470354..51780619
Genome browser
AA seq
751 aa
AA seq
DB search
MLPALALVVLAAWTARALEVPTDSNAGLLAEPQVAMFCGKLNMHMNVQNGKWESDPSKTK
TCIGTKEGILQYCQEVYPELQITNVVEANQPVTIQNWCKKGGKQCKTHPHIVIPYRCLVG
EFVSDALLVPDKCKFLHQERMDVCETHLHWHAVAKETCSKKSTNLHDFGMLLPCGIDKFR
GVEFVCCPLAEESDNIDSADAEEDDSDVWWGGADTDYADGSEDKVVEVTEEEEVADVEEE
EAEDDEDDEDGDEVEEEAEEPYEEATERTTSIATTTTTTTESVEEVVREVCSEQAETGPC
RAMISRWYYDVSEGKCAPFFYGGCGGNRNNFDTEEYCLAVCGSVIPTTAASTPDAVDKYL
ETPGDENEHAHFQKAKERLEAKHRERMSQVMREWEEAERQAKNLPKADKKAVIQHFQEKV
ESLEQEAANERQQLVETHMARVEAMLNDRRRQALENYVTALQAVPPRPRHVFNLLKKYVR
AEQKDRQHTLKHFEHVRMVDPKKAAQIRSQVMTHLRVIYERMNQSLSLLYNVPAVAEEIQ
DEVDELLQKEQNYSDDVLANMISEPRISYGNDALMPSLTETKTTVELLPVNGEFSLDDLQ
PWHPFGVDSVPANTENEVEPVDARPAADRGLTTRPGSGLTNIKTEEISEVKMDTEFRHDA
GYEVHHQKLVFFAEDVGSNKGAIIGLMVGGVVIATVIVITLVMLKKKQYTSIHHGVVEVD
AAVTPEERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgctgcccgccttggcactggtcgtgctggccgcctggacggctcgagcgctggaggtg
cccactgacagcaatgctggcctgcttgcagagcctcaagtggccatgttctgtggcaag
ctgaacatgcacatgaatgtacagaatgggaaatgggagtctgatccctccaagaccaaa
acttgtattggcaccaaggaaggcatcctgcaatactgccaagaagtctaccctgaactg
cagatcaccaatgtggttgaagccaaccagcctgtgactatccagaactggtgcaagaag
ggaggcaaacagtgcaagacccatccccacattgtgatcccctaccgctgcctggttggc
gagtttgtaagtgatgcccttcttgttcctgacaagtgcaaattcttacaccaggagagg
atggatgtgtgtgaaacccaccttcactggcacgccgtcgccaaagagacctgtagtaaa
aagagtaccaacttgcatgactttggcatgttgctgccctgtggaatcgacaagtttcga
ggggtggagtttgtgtgttgcccactggcagaggagagtgataatattgactcagcagat
gcagaagaggatgactctgatgtctggtggggtggagccgatacagactatgcagatggg
agtgaagacaaagtagtggaagtcacagaggaagaggaagtggctgatgttgaggaagag
gaagctgaagatgatgaggatgatgaagatggtgatgaggtggaggaagaggctgaggaa
ccctacgaagaggctacagaaagaaccaccagtattgccaccaccaccaccaccaccaca
gagtctgtggaagaggtggtccgagaggtgtgctccgaacaagccgagacggggccatgc
cgagcaatgatctcccgctggtactatgatgtgagtgaagggaagtgcgcacccttcttt
tacggcggatgtggaggcaaccgaaacaactttgacacggaggagtactgcctggccgtg
tgtggcagcgtcattccgactacagcggccagcacccctgacgctgtcgataagtacctg
gagacacctggagatgagaatgaacatgcccatttccagaaagccaaggagaggctggag
gccaagcaccgtgagagaatgtcccaggtcatgagagaatgggaagaagcagaacgtcaa
gcaaagaacttgcctaaagctgataagaaagcagttatccagcatttccaagagaaagta
gaatctctggagcaggaagccgccaatgagagacagcagttggtggagacacatatggcc
cgagtggaagccatgctcaatgaccgccgtcgccaggccctggaaaactacgtcactgcc
ctacaggctgtccctcctcggcctcgtcatgtgttcaacctgctgaagaaatatgtccgt
gctgaacagaaagacagacagcacaccctcaagcactttgagcatgttcgcatggtggac
ccaaagaaagctgctcagatccggtcccaggtcatgacgcacctccgtgtgatttatgag
cgcatgaaccagtctctctccctgctctacaatgtacctgcagtggccgaggagattcag
gatgaagttgatgagctgctccagaaagaacaaaactactcggatgatgtcttggccaat
atgatcagtgaaccaagaatcagctatggaaatgatgctcttatgccatctttgaccgag
acgaaaaccactgtggagcttcttccggtgaatggagagtttagcctggatgatctccag
ccctggcatccttttggggtcgactcggtgcctgccaatacggaaaatgaagtcgagccc
gttgacgcccgccctgctgccgaccgaggactgaccacccgaccaggttcaggactgaca
aacatcaagacagaagagatctcggaagtgaaaatggataccgagttccgacacgacgca
ggatatgaagttcatcatcaaaagttggtattctttgcagaagatgtgggttcaaacaaa
ggtgcaatcattggactcatggtgggtggcgtcgtcatagcaacagtgattgttatcacc
ttggtgatgttgaagaaaaaacaatacacgtccatccatcacggcgtggtggaggttgac
gctgctgtgaccccagaagagcgtcacctctccaagatgcagcagaatggctacgaaaac
ccaacttacaaattcttcgagcagatgcagaactaa
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