Suncus etruscus (white-toothed pygmy shrew): 126026177
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Entry
126026177 CDS
T09902
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04145
Phagosome
setr04148
Efferocytosis
setr04151
PI3K-Akt signaling pathway
setr04510
Focal adhesion
setr04512
ECM-receptor interaction
setr04810
Regulation of actin cytoskeleton
setr04820
Cytoskeleton in muscle cells
setr05165
Human papillomavirus infection
setr05205
Proteoglycans in cancer
setr05410
Hypertrophic cardiomyopathy
setr05412
Arrhythmogenic right ventricular cardiomyopathy
setr05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
126026177 (ITGB5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
126026177 (ITGB5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
126026177 (ITGB5)
04148 Efferocytosis
126026177 (ITGB5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
126026177 (ITGB5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
126026177 (ITGB5)
04810 Regulation of actin cytoskeleton
126026177 (ITGB5)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
126026177 (ITGB5)
09172 Infectious disease: viral
05165 Human papillomavirus infection
126026177 (ITGB5)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
126026177 (ITGB5)
05412 Arrhythmogenic right ventricular cardiomyopathy
126026177 (ITGB5)
05414 Dilated cardiomyopathy
126026177 (ITGB5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
setr04131
]
126026177 (ITGB5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126026177 (ITGB5)
Membrane trafficking [BR:
setr04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
126026177 (ITGB5)
Cell adhesion molecules [BR:
setr04515
]
Integrins
Integrin beta subunits
126026177 (ITGB5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_2
I-EGF_1
EGF_Teneurin
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
126026177
NCBI-ProteinID:
XP_049641839
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Position
13:26991905..27123265
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AA seq
799 aa
AA seq
DB search
MPRVPCLLPCLLGLCALVPGLAGLNICTSGSATSCEECLLIHPKCAWCSKEDFGSPRAMM
SRCDLKTNLVRNGCGSKLESPASSTQVLRNLPLSTKGSSPSGSDVIQMTPQKMAMSLRPG
DKTAFQLQVRQVEDYPVDLYYLMDLSLSMKDDLDSIRNLGTKLAEEMRKLTSNFRLGFGS
FVDKNISPFSYTAPRYQTNPCIGYKLFPNCLPSFGFRHLLPLTDRVDSFNEEVRKQRVSR
NRDAPEGGFDAILQAAVCKEKIGWRKDALHLLVFTTDDVPHIALDGKLGGLVQPHDGQCH
LNEANEYTASSQMDYPSLALLGEKLAENNINLIFAVTKNHYMLYKNFTALIPGTTVEILH
GDSKNIIQLIINAYNSIRSKVELSVWDQPEDLNLFFTATCQDGISYPGQRKCEGLKIGDT
ASFEVSVEARNCPSGPTEHRFTLRPVGFRDSLEVGVTYNCKCSCSFESQPDSVQCSGNGT
FVCGLCECNPNHLGTRCECQEGESPRVFQNLCREAEGKPLCSGRGECNCNQCSCYESEFG
KIYGPFCECDNFSCARNKGVLCSGHGECHCGECKCQAGYIGDNCNCSTDTSTCWAKNGQI
CSGRGHCVCGQCQCTEPGAFGETCEKCPTCPDACSSKRECVDCLLLHSRNPADNHTCQAP
CKDEVVTWTDAIGKDDQEAVLCFYKTAKDCVMLFTYAELPSGRTNLTVLREPECGTAPNA
MTILLAVVGSILLVGLALLAIWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST
HTVDFTFNKFNKSYNGTVD
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgccacgggtcccctgtctgctcccctgtctgctcgggctctgcgcgctcgtgccggga
ctcgcaggcctcaacatctgcactagtggaagtgccacctcttgtgaagaatgtctcctt
atccaccccaagtgtgcctggtgctccaaagaggacttcggcagcccaagggcaatgatg
tcccgatgtgacctgaagacaaacctggtgcgcaacggctgcggaagcaagttggagagc
ccagctagcagcacgcaggttctgcggaatctgcccctcagcaccaagggctccagcccc
tcgggctctgatgtcattcagatgaccccccagaagatggccatgagcctgcgacccggg
gacaagacagccttccaactacaagttcggcaagtagaggattatcctgtggacttgtac
tacctaatggacctctccctgtccatgaaggatgacctggacagtatccggaaccttggc
actaagctggcagaggaaatgaggaaactcaccagcaatttccggctgggctttgggtcc
tttgtagacaagaacatttctcctttctcttacacagcaccgaggtaccagaccaaccca
tgcattggttacaagttgtttccaaactgcctcccctccttcggcttccgccacctgctg
cccctcacagacagagtcgacagcttcaatgaagaagttcggaagcagagggtgtcccgg
aaccgcgatgcccctgagggaggctttgacgcaatactacaggctgctgtgtgcaaggag
aagattggctggcggaaggatgcgctgcacttgctggtgtttaccacagacgacgtaccc
cacatcgcactggatggcaagctggggggtctggtgcagccacatgatggccaatgccac
ctgaacgaggccaatgagtatacagcatccagccagatggactatccatcccttgccttg
cttggagagaaactggcagagaacaacatcaacctcatttttgcagtgacgaagaaccat
tacatgctctacaagaattttacagccttgatccctggaacaacagtggagattttacat
ggagattccaaaaatatcattcagctgattatcaacgcatacaatagcatccgatcaaag
gtagagctgtcggtgtgggatcaaccagaggatctgaacctcttcttcactgctacctgc
caagatggtatatcctaccctggtcagaggaagtgtgagggcctgaagatcggggacacg
gcatcctttgaggtgtcagtggaggcgcggaactgcccaagcgggcccacagaacacaga
ttcaccctgcgacctgtggggttccgggacagcctagaggtgggtgtgacctacaactgc
aagtgcagctgcagctttgagtcccagccggacagtgtccagtgcagcgggaacgggaca
tttgtgtgtggcctgtgcgagtgcaaccccaaccaccttggcaccaggtgtgagtgccag
gaaggtgagagtccacgagtgttccagaacctgtgccgggaggcagaaggcaagccacta
tgcagcggacgaggtgagtgcaactgcaaccagtgctcctgctacgagagtgagtttggg
aagatctacggacctttctgcgagtgtgacaacttctcctgcgccaggaataaaggagtc
ctctgctcaggtcatggtgaatgtcactgtggagaatgcaagtgccaagcaggttacatt
ggggacaactgtaactgttcaacggataccagcacctgctgggccaagaatggccagatc
tgcagtggccgcggacactgtgtctgtgggcagtgtcagtgcacagagccgggagccttt
ggggagacatgtgagaagtgccctacctgccctgatgcctgcagcagcaagagagagtgt
gtggattgtttgctgctacactccagaaatccagctgacaaccacacctgtcaggctcca
tgcaaggatgaggtggtcacgtggacagatgccattgggaaagatgaccaagaggcagtg
ctttgcttctacaaaactgctaaagactgtgtcatgctgttcacctatgcagagctcccc
agtgggcggaccaatctgacagtcctcagggaaccagaatgtggaaccgcccccaatgcc
atgaccattctactggccgtggtaggcagcatcctgctggtggggcttgctctactggcc
atctggaagcttcttgtcaccatccatgacaggagagagtttgccaagttccagagcgag
agatccagggcccgctatgaaatggcctccaacccgctgtacagaaaacccatctccaca
cacaccgtggatttcaccttcaacaagttcaacaaatcctacaatgggactgtggactga
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integrated database retrieval system
