Suncus etruscus (white-toothed pygmy shrew): 126026189
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Entry
126026189 CDS
T09902
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04360
Axon guidance
setr04724
Glutamatergic synapse
setr04726
Serotonergic synapse
setr04929
GnRH secretion
setr04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
126026189 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
126026189 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
126026189 (TRPC1)
04726 Serotonergic synapse
126026189 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
126026189 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126026189 (TRPC1)
Ion channels [BR:
setr04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
126026189 (TRPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
RIN1
Motif
Other DBs
NCBI-GeneID:
126026189
NCBI-ProteinID:
XP_049641852
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Position
13:complement(24347520..24396372)
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AA seq
794 aa
AA seq
DB search
MMAALYPSTDLSGASSSSLPSSPGSSASPHEVMALKDVREVKEENSLHEKLFLLACDKGD
YYMVKKILEENSSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAID
SEVVGAVDILLNHRPKRASRPTIVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLL
KQDVSLPKPHAVGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFE
LSADLKELSLVEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRG
LLEERMNLSRLKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLAVGI
FWPVLSLCYLIAPKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPA
LERIDYLLILWIIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNK
FHDFADRKDWDAFHPTLVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQDFGK
FLGMFLLVLFSFTIGLTQLYDKGYTSKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIF
SLAHVAIFVTRFSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKE
WKFARAKLWLSYFDDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKLKRQNSLKE
WRNLKQKRDENYQKVMCCLVHRYLTSMRQRMQSTDQATVENLNELRQDLSKFRNEIRDLL
GFRTSKYAMFYPRN
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagcgctgtacccgagcaccgacctctcgggcgcctcctcctcctccctgccg
tcctccccgggctcctcggcgtcgccccacgaggtgatggcgctcaaggatgtgcgggag
gtgaaggaggagaacagcctgcacgagaagcttttcttgctggcgtgcgacaagggtgac
tattatatggttaaaaagattttggaggaaaacagttcaggtgacttgaacataaattgc
gtagatgtgcttgggagaaatgctgttaccattactattgagaacgaaaacttggatata
ctgcagcttcttttggactacggttgtcagtccgcagatgcacttttggtggcaatcgac
tcggaagtagtgggagctgttgatatactacttaatcatcggcccaaacgcgcatccaga
cctaccatagtaaagctaatggaaagaattcaaaatcctgagtattcaacaacgatggat
gtagcaccagtcattttagctgctcatcgaaacaactatgagattcttacaatgctactg
aaacaggatgtctctttgcccaaaccccatgcggttggttgtgaatgtacattgtgctct
gcaaaaaacaaaaaggacagccttcggcattccaggtttcgtcttgatatatatcgctgt
ttggccagtccagctctaatcatgctaacagaagaggatcccattctcagagcatttgaa
cttagtgctgatttaaaagaactaagccttgtggaggttgaattcaggaatgattatgag
gaacttgcccggcagtgtaaaatgtttgctaaagatttgcttgcccaagcccggaattca
cgagaactggaagtcatcctgaaccatacgtcgagtgatgagcctcttgacaaacgggga
ttactagaagagagaatgaatttgagtcgtctgaaacttgctatcaaatataaccaaaag
gagtttgtctctcaatctaactgccagcagttcctcaacactgtttggttcggacagatg
tctggctaccggcgcaagcccacctgtaagaagataatgactgttttggccgttggcatt
ttttggccagttttgtcactctgttatttaatagctcccaaatctcaatttggcagaatc
attcatacaccttttatgaaatttattattcatggagcttcctatttcacatttctgctg
ttactaaacctatattccttggtttataatgaggataagaaaaacaccatgggaccagcc
ctggaaagaatagattatcttcttatactgtggattattgggatgatttggtcagatatt
aaaagactctggtatgaagggttggaagactttctagaagaatctcgtaaccaactcagt
tttgtcatgaattcactttatctggcaactttcgccctcaaagtggtggctcacaacaag
tttcatgattttgctgatcggaaggactgggacgcatttcacccaactctggtggcagaa
ggactttttgcctttgcaaatgttctgagttaccttcgtctcttttttatgtatacaaca
agttctatcttgggtccattacagatttcaatgggacagatgctacaggattttggaaaa
ttccttgggatgttccttcttgttttgttttctttcacaattggattgacacagctgtat
gataaaggttacacttcaaaagagcagaaggactgtgttggcatcttctgtgaacagcag
agcaatgatactttccactcgttcattggcacatgctttgctttgttctggtatattttc
tctttagcacatgtggccatttttgtcacaagattcagctatggggaggagctacagtcc
tttgttggggctgtcatcgtgggcacctacaatgtggtggtggtaatcgtgctcaccaag
ctgctagtggccatgctgcacaaaagcttccagcttattgccaatcatgaagacaaagag
tggaagtttgcacgagccaagttgtggcttagctactttgatgacaagtgtacattgcct
ccacctttcaatatcattccttcccctaagactatctgctatatgattagtagtctcagc
aaatggatttgctctcatacatcgaaaggcaaacttaagcggcaaaacagcttaaaggag
tggagaaacctgaagcaaaagagagatgaaaactaccagaaagtcatgtgctgcttggtg
catcgatacctgacctccatgaggcagaggatgcagagcacagaccaggcgactgtggag
aatctcaatgagctgcgccaagatctctcaaaattccgtaatgaaatacgggatttacta
ggctttcggacttccaagtatgctatgttttatccaagaaactaa
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