Suncus etruscus (white-toothed pygmy shrew): 126026872
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Entry
126026872 CDS
T09902
Symbol
CHRNE
Name
(RefSeq) LOW QUALITY PROTEIN: acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
126026872 (CHRNE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
setr04040
]
126026872 (CHRNE)
Ion channels [BR:
setr04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
126026872 (CHRNE)
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2460
Motif
Other DBs
NCBI-GeneID:
126026872
NCBI-ProteinID:
XP_049641942
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Position
1:153087098..153092115
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AA seq
501 aa
AA seq
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MAAWGSKSYPAYLFQANSSYKDQVCGIGEGNREELRLYHHLLDNYDNSHRPVKRPEETVT
ITLKVTLTNLISLNEKEETLTTSVWIGIDWYDYRLNYSKNDFEGIEIMRVPANLVWLPEI
VLENNIDGQFDVAYDCNVLIYEGGYVSWLPPAIYRSTCAVEVTYFPFDWQNCSLVFRSQT
YSAEEVEFIFASDDDGQVINQLYIDTEAYTENGEWAIDYCPGVIHHTDSGTADGQGSIEV
IYTLIIRRKPLFYIINIIVPCVLISGLVLLAYFLPAQAGGQKCTVSINVLLAQTVFLFLI
AQKIPETSLSVPLLGRFLIFVMVVATLIVMNCVIVLNVSLRTPSTHAASPRLRHVLLTSC
PLLPRLXGSAAPPAAPQPASAPRRASSVGLLLRAEELILKKPRAKLVFEGQRHRPRAALC
QSLGAGPPEIRSCVDALNFIAXEHAEREAAEEEVSDWVRMGKALDNLCFWAALVLFGVGS
SLIFLGAYFNRVPELPYPPCM
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttggggttccaagtcctaccctgcttacctgttccaggccaactccagttat
aaggatcaggtctgtggcataggtgaaggcaatagagaggagttgcgtctgtatcatcat
ctcttggacaactatgacaattcacacaggcctgtgaagaggcctgaggaaactgtcact
atcacactcaaggttaccctgaccaacctcatttcactgaatgagaaagaggagaccctg
accacgagcgtctggattggaattgactggtatgattaccgactcaactacagcaagaac
gattttgagggtatagagatcatgcgggtccctgcaaatctcgtgtggctaccagagatt
gtgctggaaaataatattgacggccagttcgatgtggcctacgattgcaacgttctcatc
tatgaaggcggctatgtaagctggttgcccccagccatctaccgcagcacctgcgccgtg
gaggtcacctatttccccttcgactggcagaactgctcgctagtatttcgctcacagaca
tacagtgctgaagaggtggagttcatctttgcctcggatgatgatggccaggtcattaac
caactctatatagacactgaggcctatactgaaaacggcgaatgggccatcgactactgt
ccaggggtgatccaccacacagacagtggcacggctgatggccaaggaagcatcgaggtc
atctacacgctcatcattcgtcggaagccgctcttctacatcattaatatcattgtcccc
tgtgtgctcatctctggcctggtgctgcttgcctactttctgcctgcacaggccggaggc
cagaaatgcaccgtctccatcaatgtcctactcgcccagacagtcttcttgttcctaatt
gcccagaaaatcccagagacctctctgagtgtgccgctgctgggcaggttcctcatcttc
gtcatggtggtcgccacgctcatcgtcatgaactgcgtcatcgtgctcaacgtgtctcta
aggacgcccagcacgcacgccgccagcccgcgcctgcgccacgtgctgctgacctcctgc
ccgctcctgccccgcctcnntggctcggccgcgcccccggctgccccccagcccgcctcg
gccccccggcgcgcctcgtccgtcggcctcctgctgcgggccgaggagctgatcctcaag
aagccgcgcgcgaagctcgtgttcgagggccagcggcaccggccacgcgctgccctgtgc
cagagcctgggcgccggcccgcccgagatccgcagctgcgtggacgccttgaacttcatc
gcctgagagcacgcggaacgggaggccgccgaggaggaggtgtccgactgggtccgcatg
ggcaaggccctcgacaacctgtgcttctgggccgccctggtgctcttcggcgtgggctcc
agcctcatcttcctcggcgcctacttcaaccgagtgcccgagctgccctacccgccctgc
atgtga
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