Suncus etruscus (white-toothed pygmy shrew): 126027074
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Entry
126027074 CDS
T09902
Symbol
CHD9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
setr03036
]
126027074 (CHD9)
Chromosome and associated proteins [BR:
setr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
126027074 (CHD9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HDA2-3
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
126027074
NCBI-ProteinID:
XP_049642006
LinkDB
All DBs
Position
14:47334177..47578737
Genome browser
AA seq
2902 aa
AA seq
DB search
MTDPMMDFFDDANLFGETLEGLSDDAFVQPGPVSLVDELNLGAEFEPLHIDPLNHVQGTP
THQKMTDYEQLNQFDSMKFHQVNQSFGSPAEHVLSPHSQFNCSPIHPQNQPNGLFPDVTD
GSPMWGHQTATSISNQNGSPFHQQGHSHSMHQNKSFVSHHEFALFQANEQQTQCTSLRSQ
QNRSNLNPGQNSLSQTKNFMDVNVSGPHRVSVNHPSQITNASTSQQSLSMQQFSQTSNPS
VHFLKCSSHQDASFNGPSPNMTSCSVSNSQQFSSHYSFSSNHVSPNNLLQSSAVLAPNHT
NQSLSDFTGNNSFSPHRGLKQESTQHMLNPNTSLNSNFQMLHSSHPQGNYSNSKLSPVHM
NFPDPVDSGTQMGHFNDHVETNGFSSLEENLLHQVESQTEPFPGLDPDDLLQEGLLPQFD
ESTFGQDNANHVLDHDLDRHFTSHLITRPSDMTQIQLHGQSRSWHSSLSNHQHLHDRSRL
CLQRQPPSSKKNDGSGTYTKLQNTQVRIMSEKKQRKKVESESKQEKANRIISEAIAKAKE
RGERNIPRVMSPENFPSASVEGKEEKKGRRMKSKPKDKESKKPKTCSKLKEKTKIGKLII
TLGKKQKRKNDSTDDISDVEQMTQHTLKGEDSQKRRSNRQIKRKKYAEDAEGKQSEEEVK
GSIRIKKNSAPLPGEQPLQLFVENPSEEDAAIVDKILSSRIVKKEISLGVMIDTEEYFVK
YKNYSYLHCEWATEQQLLKDKRIQQKIKRFKLRQAQRAHFFADMEEEPFNPDYVEVDRVL
EVSFCEDKDTGEPIIYYLVKWCSLPYEDSTWELKEDVDLAKIEEFEQLQAARPDTRHLDR
PPSNIWKKIEQSREYKNGNQLREYQLEGLNWLLFNWYNRRNCILADEMGLGKTIQSITFL
YEILLTGIRGPFLIIAPLSTIANWEREFRTWTDINVVVYHGSMISRQMIQQYEMYFRDSQ
GHIIRGAYRFQAIITTFEMILGGCGELNAIEWRCVIIDEAHRLKNKNCKLLEGLKLMNLE
HKVLLTGTPLQNTVEELFSLLHFLEPLRFPSESTFMQEFGDLKTEEQVQKLQAILKPMML
RRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILEKNFSFLSKGAGQTNVPNLVNTMME
LRKCCNHPYLIKGAEEKILGEFRDTYNPAASDFHLQAMIQSAGKLVLIDKLLPKMKAGGH
KVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTR
AGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQNKAVKVYRLVTRNSYEREMFDR
ASLKLGLDKAVLQSMSGREGSVGGIQQLSKKEIEDLLRRGAYGAIMEEEDEGSKFCEEDI
DQILLRRTKTITIESEGRGSTFAKASFVASGNRTDISLDDPNFWQKWAKKAEIDIDALSC
RNSLVIDTPRIRKQTRPFSATKDELAELSEPESEGEEKPKLRRPCDRSNGYGRTECFRVE
KNLLVYGWGRWREILSHGRFKRQLNEHDVEIICRALLAYCLVHYRGDEKIKGFIWDLITP
TEDGQTRELQNHLGLSAPVPRGRKGKKVKTQTSSFDIQKAEWLRKYNPEQLLQDEGYKKH
IKHHCNKVLLRVRMLYYLKQEVIGNEWQKVFDGVDASDIDVWVPEPDHSEVPAEWWDFDA
DKSLLIGVFKHGYEKYNTIRADPALCFLERVGKPDEKAVAAEQRANDFMDGDVEDPEYKP
APALFKDDIEDDVSSPGDLVIADGDGQLMEGDKVYWPTQSALTTRLRRLITAYQRTNKNR
QIQQIQPSFSVPASVMQPLYEEATLNPKMAAKIERQQRWTRREEADFYRVVSTFGVVFDP
NRGQFDWTKFRAMARLHKKTDDSLEKYLYAFMSMCRRVCRLPSKEELVDPNILIQPITEE
RASRTLYRIELLRKVREQALRHPQLFERLKLCHPNPDLPVWWECGPHDRDLLIGAAKHGV
SRTDYHILRDPELSFMAAQRNYSQSKMAHSRTSTPLLQQYQVALSASPLTSLPRLLDAKG
ILEDMKVKSENLKEEPPSSEEESMSSEETRTLIKSEPVSPKNGVLPPATGDQKSGGKGET
DRHMVAARTEPLTPNPTSKKQQTHKRSESSSESDSDSERSSCSSRSSSSSSSSSSCSHSR
SGSSSSSSSSCSSASSSSSSSSSSSSSSSSSTSEESDSEEEEAQKRAEGTPHIKAYDEES
VASLSTTQDETQDSFQMNNGTPESAYILQGGYMLAASYWPKDRVMINRLDSICQTVLKGK
WPAARRSYDANTVASFYTTKLLDSPGAATEYSEPSVPTPPGAGVKEEHDQSTQMSKVKKH
VREKEFTVKIKDEGGLKLTFQKQGLAQKRPLGSEDSAPGQQQYLTRLRELQSASETSLTN
FPKSLAVSGTSIQSNLGANGVILDNQPIVKKRRGRRKNVEGVDILFFNRNKPPNHVNLGL
ATSQISAGINPALSFTRSQGIPYAENPVPVINLKDGTRLAGDDAPKRKDLEKWLKEHPGY
VEDLGAFIPRVQLHEGRPKQKRHRCRNPNKLDVNSLTGEERVQLINRRNARKVGGAFAPP
LKDLCRFLKENSEYGVAPEWGDVVKQSGFLPENMYERILTGPVVREEVSRRGRRPKSGIA
KATAAAAAAAATASSVSSSPLLANGLLPGVDLTTLQALQQNLQNLQSLQVTAGLMGMPAS
LSSGGEAKNIAAMFPMLLSGMAGLPNLLGMGGLLTKPTESGTEDKKGNDSKELEGKKDRT
ESQNAENGGENSVSGSPATSSTAALNTAAAANPLALNPLLLSNILYPGMLLTPGLNLHIP
TLSQSNTFDVQKNKNDDLGSSKTVEVKEEDSRVRDQEDKRGTEPSPLNENSTDEGSEKAD
ASSGSDSTSSSSSEDSDSSNED
NT seq
8709 nt
NT seq
+upstream
nt +downstream
nt
atgacagatccaatgatggacttttttgatgatgccaatctttttggtgagaccttagaa
ggcttgtcagatgatgcatttgtacaaccaggacctgtttcactagttgatgaattgaac
ttgggtgcagaatttgaacctttgcatatagatccactgaaccatgttcaaggtactcca
acacatcagaagatgactgattatgaacagttaaatcaatttgattccatgaaattccac
caagttaatcagtcttttggtagcccagctgaacacgtgttatctccacactctcagttt
aattgttctccaattcaccctcaaaaccaacccaatggtttgtttccagatgtaacagat
ggcagtccaatgtggggtcatcaaacagctactagcatttcaaatcaaaatgggtctcct
tttcatcaacaaggacattctcactctatgcatcagaataaaagctttgtgtcacaccat
gaatttgccttatttcaggccaatgaacagcaaacacagtgcacttcactacgctcccaa
caaaacagaagtaatcttaacccagggcaaaattctcttagccagactaaaaattttatg
gatgttaatgtttctggtcctcacagagtcagtgttaatcacccatcacaaattactaat
gcatctacttcacaacagtctctttcaatgcagcaattttctcagacatcaaatccttca
gtacatttcctcaagtgtagtagtcatcaagatgcaagttttaatggaccttctccaaat
atgacttcttgttctgtcagtaattctcaacagttttcttcacattattccttttccagt
aatcacgtatcaccaaacaatcttcttcagtcctctgcagttcttgcacctaatcataca
aatcagagtttatctgattttactggaaacaattccttttcgcctcatagaggactcaag
caagaatccactcagcatatgttaaatcccaatacatcattgaattcaaatttccaaatg
ttgcattcatcacatcctcagggtaattatagcaattcaaaattatcacctgtgcacatg
aactttccagatcctgttgactcaggaactcaaatgggccatttcaatgatcatgtagaa
actaatggcttttcatctttagaagagaatttacttcatcaagtggaatctcagactgag
ccattcccaggacttgacccagatgacctccttcaggagggtctccttccccaatttgat
gagtcaacatttgggcaagataatgcaaatcatgttttagatcatgaccttgaccggcac
tttacttcacatcttataacacggccttctgatatgactcaaattcagttgcatggtcag
tctcggagctggcattcatcactttctaatcatcagcatttacatgacagaagtcgcctg
tgtttacagcgacagcctccatcttccaagaagaacgatggttctgggacatatactaag
ttgcagaatacccaggtgaggatcatgtctgagaagaagcagagaaaaaaggtggaatca
gaaagcaagcaagaaaaggctaatcgaataatatcagaagccatagcaaaagcaaaggag
cgtggggaacgcaatattccacgagtaatgagccctgaaaactttcctagtgcttcagtt
gaaggaaaagaggaaaagaaaggcagaaggatgaaatccaagccaaaggacaaagagagt
aaaaaaccaaaaacttgttctaagttaaaagagaagacaaaaattggcaaactcattatt
acattgggtaaaaaacaaaaaagaaagaatgattctacagatgatatatctgatgtggag
cagatgacacagcacacactcaaaggggaagactctcaaaaaagaagatcaaatcgacaa
attaaaaggaaaaaatatgcagaagatgctgaaggaaagcaatctgaagaagaggttaaa
ggctcaataagaataaaaaagaattcagctcctttacctggagaacagcctttacaatta
tttgtggagaatcccagtgaagaagatgctgcaattgtagacaaaattctatcttccaga
attgtaaaaaaggaaatatcacttggagtgatgattgacacagaagaatattttgtaaaa
tataaaaattactcctatcttcactgtgaatgggccacagagcagcagcttttgaaagat
aaaaggatacagcagaagatcaaaagattcaaactgagacaagcacaaagagcacatttt
tttgcagatatggaagaagaaccattcaacccagactatgttgaagtagacagagtttta
gaagtctctttttgtgaagataaagatactggtgagcctattatttactacttagtaaag
tggtgttcattaccatatgaagatagtacttgggaattaaaagaagatgtagatcttgca
aaaatagaggagtttgaacaattgcaagctgcaaggcctgacacaagacatttggatcgt
cctccctctaatatttggaaaaaaatagaacaatccagggagtataaaaatggcaatcaa
ctcagggaataccaactggaaggactcaactggctcttgttcaattggtataatagacga
aactgcattttagcagatgaaatgggtcttggcaaaaccattcagtcaattacattcctt
tacgaaatccttctgactggtataagaggacctttcctaattattgctccactttctact
attgcaaactgggaaagagaatttcgtacgtggacagatattaatgttgtggtttatcat
gggagcatgattagcaggcagatgatacagcaatatgagatgtatttcagggattcacag
gggcatataattcgcggagcttacagattccaggctatcataaccacatttgaaatgatt
cttggaggctgtggagaacttaatgcaattgaatggagatgtgtgattattgatgaagca
catagattaaaaaataaaaattgtaaacttctagaaggtctaaaactcatgaacttggaa
cacaaagtgcttttgactggtacacctctccaaaacacagttgaagaactgttcagtctt
ctacactttctagagcccttgaggtttccttctgaatcaacatttatgcaagaatttgga
gatctgaaaacagaggaacaggtgcaaaaacttcaggctattctgaaaccgatgatgttg
cgtcgattgaaagaagatgtggaaaagaagttagcaccaaaggaagaaaccattattgaa
gtggaacttactaacattcaaaagaaatactaccgggctatattggagaagaacttttca
tttttgtccaaaggagcagggcagactaatgtaccaaatttagtaaataccatgatggag
ctcagaaaatgctgtaatcatccatatcttatcaaaggtgctgaggagaaaatacttgga
gaatttagagacacatataatccagctgcttctgattttcatcttcaagcaatgattcaa
tctgctggtaaattggtcctgattgataaattacttcccaaaatgaaagcagggggtcat
aaagtgctcatcttctctcaaatggtacgctgtcttgacattctggaggactatcttatt
cataaaagatatttatatgagcgaattgatggaagagtcagagggaatcttcgacaagct
gctatagatagatttagtaaacctgattcagatcgatttgttttccttctatgtacccga
gctggtgggttgggcatcaacttaactgcagctgatacatgtataatttttgattctgat
tggaatcctcaaaatgaccttcaggctcaagctcgttgccacagaattggccagaataaa
gcagttaaagtctaccgactagtaactcgtaactcatacgagagagaaatgtttgaccga
gccagtctgaaactgggcttagataaggctgtgttacagagcatgagtggacgagaaggc
agtgttggtggtattcagcaactttccaaaaaggaaatagaagatctgcttcgaagaggt
gcctatggtgccattatggaagaagaagatgaaggttcaaagttctgtgaggaggacatt
gatcagatcttactacgtcgcactaaaaccattactattgagtctgaaggacgtgggtca
acatttgccaaggcaagttttgtggcatctggaaaccgaacggatatttctttagatgat
cccaacttctggcagaaatgggctaaaaaggcagaaatagatattgatgccctcagttgc
agaaacagtttggttattgacacaccaagaattaggaagcaaaccagacccttcagtgcc
acaaaagatgagttggcagagttatctgaaccagagagtgaaggtgaagaaaagcccaaa
ctcaggagaccctgtgaccgctccaacggctatggtagaactgaatgctttcgagtagag
aaaaacctgctagtctatgggtggggccgatggagagagattctctctcatggccgtttt
aaaaggcaactaaatgagcatgatgtcgagataatttgccgtgccctcttagcatattgc
cttgttcattaccgaggagatgagaaaattaaaggctttatatgggatcttatcactcca
actgaagatgggcagacacgagagctacaaaaccatctaggtttatccgcacctgtacct
cgaggtcgaaaagggaagaaagtaaagactcaaacaagttcatttgatatacagaaagca
gaatggcttcggaaatataatcctgagcagttacttcaagatgagggctacaaaaaacat
ataaaacaccactgcaacaaggttttgcttcgtgtaagaatgctgtattatctaaagcaa
gaagttattggaaatgaatggcagaaagtatttgatggagttgatgcaagtgatattgat
gtttgggtcccagaaccagaccattcagaagttcctgccgaatggtgggattttgatgct
gataagtcactcctaataggagtgtttaaacatggttatgaaaaatacaacactatccga
gcagacccagcattatgcttcttggaaagagtgggaaaacctgatgagaaggcagttgca
gcagaacagagggcgaatgattttatggatggagatgtggaagatccagaatataagcct
gccccagctctctttaaagatgatatagaggatgatgtttcttcacctggagatcttgtt
atagcagatggagatggtcagctgatggagggggataaagtttattggcctactcagtca
gctttaaccacacgtttaaggcgtctcatcacagcttatcaacgtactaataaaaacaga
caaatccagcaaatacaacctagtttctcagtgcctgccagtgtaatgcagcctctttat
gaagaagctactcttaatcctaaaatggcagccaagatagaaagacagcaaagatggaca
agaagagaagaagctgacttttatagagttgtctctacatttggagtggtatttgatccc
aacagagggcaatttgattggacaaaatttagagctatggctagactgcataagaaaact
gatgatagtttggagaagtatttgtatgcgttcatgtctatgtgtcggagagtctgtcgt
cttccttccaaagaagaattggtagacccaaatattttaatccagccaattacagaagaa
cgggcatctaggactttgtatcgcattgaacttctaagaaaagtaagggaacaggccctc
agacatccacaattgtttgaacgcttaaagctttgccatccaaatccagacttaccggtt
tggtgggaatgtggccctcatgacagggacttgctcattggagctgctaaacacggggta
agccgaacagactatcacattcttcgtgatcctgaactctcatttatggcagctcaaagg
aactacagtcaaagtaagatggctcattcaaggacttctaccccacttttacagcaatat
caagtagcactttctgcttctcctcttacctctctacctaggctcctagatgccaaaggt
attctagaggacatgaaagttaaaagtgaaaaccttaaagaggagcctccatcttctgaa
gaagaatctatgtcttctgaggaaaccaggacattaataaagtctgagcctgtaagtcca
aagaatggtgttttgccaccggctactggcgaccagaaatctggtggaaaaggtgaaaca
gacaggcacatggtggcagccagaacagaacccctaactccaaacccaacctctaagaag
cagcaaacccacaaaagatccgaatctagttcggaatctgattctgattctgaaagatca
tcctgttcttccagatcatcgtcatcttcatcttcttcctcttcttgttcccactcacgg
tcaggctctagttcctcttcatcctcctcttgttcttcagcctcctcttcatcctcgtcc
tcgtcctcatcctcgtcctcatcgtcttcatctacatcagaagagagtgacagtgaagaa
gaggaagcccaaaagcgagcagaaggtacccctcatataaaagcttatgatgaagaaagt
gttgcgtctctgagcactacccaggatgagacccaggacagttttcagatgaacaatggg
acaccagagtcagcttatatcttacaaggtggatacatgttggcagcttcctattggcca
aaggatcgtgtgatgatcaaccggttggacagtatttgtcaaacagttctgaaagggaag
tggcctgcagctcgaagaagttacgatgccaacacagttgcttctttctataccacaaaa
ctgctggacagccctggagcagccacagaatatagtgaacccagtgtcccaactcctcca
ggcgccggggttaaagaagagcatgaccagtcaacacagatgtcaaaggtgaagaagcat
gtacgagaaaaggagtttacagtgaaaatcaaagacgaaggtggcttgaagctgacattt
cagaagcaaggacttgctcagaaaagaccactcggcagtgaagacagtgctccagggcag
cagcagtacctcactcgccttcgggagctacagagcgcttcggagacaagcctcaccaat
tttccaaagtccttggcagtatcaggtacttccattcagtcaaacctcggtgccaatgga
gttatattagacaaccagcctatagtcaaaaaacggcgagggagaagaaagaatgtagaa
ggtgttgacatcctcttttttaacagaaataaaccacctaatcatgttaatttgggatta
gccacctcacagatttctgcagggataaatccagcactatcctttactcggtctcaagga
attccttatgcagaaaatcccgttccagttattaatcttaaagatggcacaagacttgca
ggtgatgatgcaccaaagagaaaagatttggaaaaatggcttaaggaacacccaggttat
gtagaagatttgggagcttttattcctagagtgcaacttcatgagggaagacccaaacaa
aaaagacatcgttgtagaaatcccaataaactagatgttaacagtctcacaggagaagaa
cgtgttcaactgataaacagaagaaatgccagaaaggttggaggtgcgttcgctccccct
ttgaaagatctctgtagatttctcaaagaaaattcagaatatggagtggctcctgagtgg
ggagatgttgttaagcaatctggatttcttccagaaaatatgtatgaacgtattctcact
ggtcctgtcgtaagagaagaagtaagcaggcgagggagacggcctaagagtggaattgca
aaggcaacagcagcagcggcagcagcagctgcaacagcctctagtgtttccagtagtcct
ttgttagccaatggcttgcttccaggtgtggatctcacaactcttcaggccttacaacaa
aacctgcagaacttgcagtcgctgcaagtaaccgcggggctgatgggaatgcctgccagc
ctttcttctggaggagaagctaaaaacattgctgcaatgttccccatgctattgtcagga
atggccggattaccaaatcttttgggcatgggaggactcttgacaaagcctacagagtct
ggaacagaagacaagaagggaaatgactctaaggagctagaggggaaaaaagacaggaca
gaaagtcaaaatgcagagaatggtggagaaaactcggtgtcaggttctcctgcaacatcc
tctactgctgcattaaatacagctgcagctgccaacccgttagctcttaacccgctgtta
ctatctaatatactttatccagggatgcttctcactccaggccttaatcttcatattcca
acattgtcccagtccaatacttttgatgtacagaaaaacaaaaacgatgacttgggctca
tctaagactgtagaagtaaaagaagaagattccagagtcagagatcaggaagacaaaagg
ggaactgaaccaagtcctctcaatgaaaacagcacagatgagggttcagagaaagccgat
gcttcgtctgggtctgatagtacatcgtcgtcatcatctgaggattcagattctagtaac
gaagactga
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integrated database retrieval system
