Suncus etruscus (white-toothed pygmy shrew): 126027091
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Entry
126027091 CDS
T09902
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04137
Mitophagy - animal
setr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126027091 (AMFR)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126027091 (AMFR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126027091 (AMFR)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
126027091 (AMFR)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126027091 (AMFR)
Multi subunit type E3
ERAD complex
126027091 (AMFR)
LMBR1L-GP78-UBAC2 complex
126027091 (AMFR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
G2BR
zf-RING_2
zf-C3HC4_2
CUE
zf-C3HC4
zf-RING_11
zf-C3HC4_3
zf-RING_UBOX
zf-ANAPC11
zf-rbx1
zf-RING_5
zf-RING_16
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
126027091
NCBI-ProteinID:
XP_049642027
LinkDB
All DBs
Position
14:complement(50571877..50615651)
Genome browser
AA seq
645 aa
AA seq
DB search
MPLLFLERFPWPSLRTYAGLSGLALLATIVSAYRALSQPEAGPASPPDLLQPLADDPEPG
EAARPSGAPRARDVAHYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLK
DKFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTP
MSSHGRVLSLLIAMLLSCCGLAVVCCVTGYNHGMHTLAFMAAESLLVTVRTAHVILRYVI
HLWDLNHEGTWEGKGTYVYYTDFGMELTLLSLDLMHHIHMLLFGSIWLSMASLVIFMQLR
YLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHL
FHNSCLRSWLEQDTSCPTCRMSLNIVDNNRAREDHQGENLDENLVPVAAAEGRPRLNQHN
HFFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQD
LQLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPVERPIGDQEEGETSAQNEHMSL
DLSPRLEETLDFGEMEAERFEEEDFEARGSRFSKSAEERQRMLVQRKDDLLQQARKRFLN
KSSEDDSASESLTLPSEGATSDPVTLRRRMLAAAAERRLQKQQTS
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgctcttcctcgagcgcttcccctggcccagcctgcgcacctacgcgggcctc
agcggcctggcgctgctcgccaccatcgtcagcgcctaccgcgccctcagccagcccgag
gccgggcccgcgtcgccgccggacctgctgcagccgctcgccgacgacccggagcccggc
gaggctgcgcggccgtccggggcgccccgggcccgcgacgtggcccactacctgctgtcc
gacagcctgttcgtctgggttctagtaaacactgcttgctgtgttttgatgttggtggct
aaactaatccagtgtattgtatttggccctcttcgagtgagcgaaagacaacacctcaag
gacaaattttggaattttattttctacaagttcattttcatttttggtgtgctgaatgtc
cagaccgtggaggaggtggtcatgtggtgcctgtggtttgctggacttgtatttctgcat
ctgatggtccagctctgtaaggatcgatttgaatatctttctttttctcccaccacaccg
atgagtagccatggccgggttctgtctctgttgattgccatgctgctctcctgctgtggc
ctagcagttgtgtgctgtgttactggctataatcatggaatgcacacgttggcgttcatg
gctgcagagtctcttcttgtgacagtgaggactgctcatgtgattttacgctatgtaatt
cacctctgggaccttaaccatgaagggacatgggaaggcaaaggaacgtatgtctactac
acagattttggcatggagctcactctcttgtccttggatctcatgcatcatattcatatg
ttgttgtttggcagcatctggttatccatggccagcttggtcatctttatgcagctacgt
tacctgttccatgaggtacaacgccgaattcgccggcacaagaactatttgcgtgtggtc
gggaacatggaagccaggtttgcagtcgccactccagaggagcttgcagtcaataacgat
gactgtgccatctgttgggactcaatgcaggctgccaggaagcttccctgtggacatctc
tttcacaattcctgtcttcgttcctggttagagcaagacacctcctgcccaacgtgcaga
atgtctcttaatatcgtggacaataatcgtgcccgggaagaccatcaaggagagaacttg
gatgagaatttggttcctgtagcagcagctgaaggcagacctcgcttaaaccaacacaat
cacttcttccactttgatggttcacggattgcaagttggctgccgagtttttcagtggaa
gtgatgcacaccaccaacattctgggcataacacaggccagcaactctcagcttaatgcc
atggctcatcagattcaagaaatgtttccccaggtcccttatcatctcgtacttcaagac
ctgcaactaacacgttctgttgaaataacaacagacaatattttagaaggacggattcaa
gtacctttccccacacagcggtcagagagcattagacctgcactgaacagtcctgtggaa
agacccattggtgaccaggaggagggagaaacctctgctcagaatgagcatatgtccctg
gatctcagtcctcgattggaggagaccttggactttggtgagatggaagcggagcgcttc
gaggaagaagactttgaggctcgagggagccgcttttctaagtctgctgaggagagacag
cgcatgctagtccagaggaaggacgacctgctgcagcaagcaaggaagcgtttcttgaat
aagagttctgaagatgactcagcctccgagagtctgacgctcccttcggaaggcgcgacc
tctgaccctgtgaccctgcgacgcaggatgctggcggctgcggcagagcggagacttcag
aagcagcagacctcctag
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integrated database retrieval system
