Suncus etruscus (white-toothed pygmy shrew): 126027104
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Entry
126027104 CDS
T09902
Symbol
SIAH1
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04115
p53 signaling pathway
setr04120
Ubiquitin mediated proteolysis
setr04137
Mitophagy - animal
setr04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
126027104 (SIAH1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
126027104 (SIAH1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
126027104 (SIAH1)
09143 Cell growth and death
04115 p53 signaling pathway
126027104 (SIAH1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
setr04121
]
126027104 (SIAH1)
Enzymes [BR:
setr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126027104 (SIAH1)
Ubiquitin system [BR:
setr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
126027104 (SIAH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
126027104
NCBI-ProteinID:
XP_049642043
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All DBs
Position
14:complement(42067266..42105714)
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AA seq
290 aa
AA seq
DB search
MQKRSVGEMSRQTATALPTGTSKCTPSQRVPALTGTTASNNDLASLFECPVCFDYVLPPI
LQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEITLPHT
EKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINL
PGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRR
RLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaagaagtgtaggagaaatgagccgtcaaactgccacagcattacctactgga
acttcgaagtgtacaccatcccagagggtgcctgctctgactggcacaactgcatccaac
aatgacttggcgagtctttttgagtgtccagtctgctttgactatgtgttaccacccatt
cttcagtgtcagagtggccatcttgtttgtagcaactgtcgcccaaagctcacatgttgt
ccaacttgccggggcccgttgggatccattcgcaacttggctatggagaaagtggccaat
tcagtacttttcccttgtaaatatgcctcttctggatgtgaaataactctgccacacaca
gaaaaagcagaccatgaagagctctgtgagtttaggccttattcctgtccgtgccctggt
gcttcctgtaaatggcaaggctctttggatgctgtaatgccccatctgatgcatcagcat
aagtccattacaacccttcagggagaggatatagtttttcttgctacagacattaatctt
cctggtgctgttgactgggtgatgatgcagtcctgttttggctttcacttcatgttagtt
ttggagaaacaggaaaaatatgatggtcaccagcagttctttgcgattgtacagctgata
ggaacacgcaaacaagcggaaaattttgcttatcgacttgagctaaatggtcataggcgg
cgattgacttgggaagcgactcctcgatctattcatgagggaattgcaacagccattatg
aatagtgactgcctagtctttgataccagcattgcacagcttttcgcagaaaatggcaat
ttaggcatcaatgtaactatttccatgtgttga
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