Suncus etruscus (white-toothed pygmy shrew): 126027293
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Entry
126027293 CDS
T09902
Symbol
CDH15
Name
(RefSeq) cadherin-15 isoform X1
KO
K06809
cadherin 15, M-cadherin
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
126027293 (CDH15)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
setr04515
]
126027293 (CDH15)
Cell adhesion molecules [BR:
setr04515
]
Cadherins
Major cadherins
126027293 (CDH15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
DUF3262
U79_P34
Motif
Other DBs
NCBI-GeneID:
126027293
NCBI-ProteinID:
XP_049642251
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All DBs
Position
14:39342372..39349942
Genome browser
AA seq
786 aa
AA seq
DB search
MDLILLLVLGLLVQQSPGLSWGAPGLGVPDTLYPWRHAPTQSRMRRAWVIPPISVSENYK
RLPYPLVQIKSDKQPLGGVIYSIQGPGVDEEPRGLFSIDKFSGRVFLNAVLDRELTDRFR
LRAFALDLGGSALEEPTDLEIVVVDQNDNRPVFRQQLFTGHVQEGAVPGTFVTRAEATDA
DDPETDNAVLRYSILEQGAPQLFSIDEVSGEIRTVQVGLDREGVAVYNLTLQVADMSGDG
LTATASAIITLEDINDNAPSFTREEFSMQATEAISGVDLGRLEVEDKDLPGSPNWVARFT
ILEGDPDRQFAIRTDPKTNEGVLSVVKPLDYESREQYHLRVGVQNEAPLQVATPRAERSQ
ARVSVRVLDVNEPPVFHENPLRTSLAEGAAPGTFVATFSAQDPDMNQLQRLRYTKDYDPG
DWLQVDGATGHIQTQRELSPHSPFLQGGWYRAIILVEDDASPPNTATGTLSIEILEVNDH
APELAPAGGSLCSAPDLGAGLLLGATDEDLPPHGAPFHFQLSPRMPGLAQNWTLSQINMS
HARLQLRHQVQEGLHRLSLLLRDSGQPPQQREQPLNVSVCHCSQDGTCLPGASALRADGA
GISLAALVVVLASLILLLILSLVAAFLARSRQRSWDKVALNGLRDDLRDNILNYDEQGGG
EEDQDAYDMDQLCHPAGLRALSVRLGRPLLRWDAPSNCGHPQPRHVLPADPAAIQDFINE
GLHAADSDPSVPPYDTALIYDYEGDGSVAGTLSSILSSHGDEDQDYSCLRDWGPRFARLA
DLYGPT
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atggacttgatactgcttctcgtgctggggttgctggtccagcagagcccaggcctgtcc
tggggggcccctggactgggcgtgccggacaccttgtacccttggcgccacgcacccacg
cagagccgcatgcgcagagcctgggtcattccacccatcagcgtgtcggagaactacaag
cgcctgccgtaccccctggtgcagatcaagtcggacaagcagcccctgggtggagtcatc
tacagcatccagggccctggcgtggatgaagagccgcgcggcctgttctccatcgacaag
ttctcggggcgggtattcctgaatgcagtgctggaccgggagctgacggaccgcttcagg
ctcagggcctttgctctggacctgggcggctctgccctggaggagcctacggacctagag
atcgtagttgtggaccagaatgacaataggccagtctttcgccagcagctgttcacaggc
cacgtgcaggagggtgctgtcccaggcacctttgtgaccagagctgaagccacagatgca
gacgaccctgagaccgacaatgcggtgctgcgttactccatcctcgagcagggcgcccca
cagctcttcagcattgatgaagtctcaggggagatccgaactgtgcaagtggggctggac
cgcgagggggtcgctgtgtacaatctgactcttcaggtggcagacatgtctggggatggc
ctcacggccactgcctcagccatcataacccttgaggacattaatgacaatgccccaagt
ttcaccagggaagagttctccatgcaggccactgaggccatcagcggtgtggacttaggg
cggctggaggtggaggacaaggacctgcctggctccccaaactgggtagctagattcacc
atcctggagggggacccagataggcagttcgccattcgcacggaccccaagactaatgaa
ggcgtgttgtctgtggtgaagcccctggactatgagagccgtgagcagtaccacctccga
gtcggggtgcagaatgaggcaccccttcaggtggccacacccagggctgaacgaagccag
gccagggtcagcgtgcgtgtgttggatgtgaatgagccccccgtgttccacgagaatccg
ctgcggaccagcctggctgagggcgcggccccggggacttttgtggccaccttctctgct
caagatcctgatatgaaccagctgcagagacttcgctataccaaggactatgatcctgga
gactggctacaagtagacggggccacgggccacattcagactcagagagagctgagccca
cattcacccttcctccagggcggatggtacagagctatcatactggtggaggatgatgct
tccccacccaacacggccactggaaccctgtccattgagatcctggaggtcaatgaccat
gcacctgagctggcaccagcagggggcagcctgtgcagtgcccctgatctgggtgctggc
ctccttcttggggccacggatgaggacctgcccccccacggagctcctttccacttccag
ctgagtcccaggatgccagggctggcccagaactggaccctcagccagattaacatgagc
catgcccgtctgcagctccggcaccaggtccaggaggggttgcaccgcctcagcctactg
ctccgggactcggggcagcccccgcaacagcgtgagcagcccctgaatgtgagcgtgtgt
cactgcagccaggatggcacctgcctgcctggggcctcggcgctgcgggcagacggcgca
ggcatcagtttggctgccctggtggtggtgctggccagcctcatcctattgctcatcctc
tccctagttgctgccttcttggcccgctcccggcagaggtcgtgggacaaggtggctctg
aatggactccgagatgatcttcgggataacatcctcaactatgacgagcagggaggcggg
gaggaggaccaggatgcctatgacatggaccagctctgccaccctgctgggctccgggcc
ttgagtgtgcgcctgggacggcctctactccgctgggatgcaccttccaactgtgggcac
ccccagcctagacatgtgctgcctgcagaccctgctgccatccaggacttcatcaatgaa
ggcctgcatgctgcggactcggaccccagtgttcccccatacgacacggcactcatctat
gattatgagggcgatggctctgtggcagggacgctgagctccatcctgtcaagccatggg
gatgaggaccaggactacagctgcctacgggactgggggccccgcttcgctcgcctggcc
gatctgtacggcccaacgtga
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