Suncus etruscus (white-toothed pygmy shrew): 126027345
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Entry
126027345 CDS
T09902
Symbol
AARS1
Name
(RefSeq) alanine--tRNA ligase, cytoplasmic
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
setr
Suncus etruscus (white-toothed pygmy shrew)
Pathway
setr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
setr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
126027345 (AARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
setr01007
]
126027345 (AARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
setr03016
]
126027345 (AARS1)
Enzymes [BR:
setr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
126027345 (AARS1)
Amino acid related enzymes [BR:
setr01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
126027345 (AARS1)
Transfer RNA biogenesis [BR:
setr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
126027345 (AARS1)
Prokaryotic type
126027345 (AARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
BAR
STX6_10_61_N
Peptidase_M13_N
Motif
Other DBs
NCBI-GeneID:
126027345
NCBI-ProteinID:
XP_049642298
LinkDB
All DBs
Position
14:67803026..67830018
Genome browser
AA seq
968 aa
AA seq
DB search
MDSTLTASEIRQRFIDFFKRNEHTYVHSSATIPLDDPTLLFANAGMNQFKPIFLNTIDPS
HPMAKLSRAANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGSWSFGDYFKELACKMALE
LLTQEFGIPVERLYVTYFGGDEAAGLEPDLECKQIWQNLGLDENKILPGNMKDNFWEMGD
TGPCGPCSEIHYDRIGGRDAAHLVNQDDPNVLEIWNLVFIQYNREADGVLKPLPKKSIDT
GMGLERLVSVLQNKMSNYDTDLFIPYFEAIQKGTGARPYTGKVGADDVDGIDMAYRVLAD
HARTITVALADGGRPDNTGRGYVLRRILRRAVRYSHEKLNASRGFFATLVDVVVQSLGDA
FPELKKDPDMVKDIINEEEVQFLKTLSRGRRILDRKIQSLGDCKTIPGDTAWLLYDTYGF
PVDLTGLIAEEKGMLVDMDGFEEERKLAQLKSQGKGAGGEDLIMLDIYAIEELREKGLQA
TDDSPKYNYHSDSSGSYEFESTTATVMALRRDKMFVDEVSTGQECGVVLDKTCFYAEQGG
QIYDEGYLVKLDDSSEDKTEFTVKNTQVRGGYVLHVGTIYGSLRVGDHVRLFVDEPRRRP
VMSNHTATHILNFALRSVLGEADQRGSLVAPDRLRFDFTAKGAMSTAQIKKAEEIANGMI
EDAKPVYTQDCPLAAAKAIQGLRAVFDETYPDPVRVVSIGVPVAKLLDDPLGPAGSLTSV
EFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVGVTGAEAQKALRKAESLKNSLLDMEAK
VKAQTAPNKDVQKEIADLGEALATAVIPQWQKDEFRESLKALKKVMDDLDRASKADVQKR
VLEKTKQLIDSNPNQPLVILEMESGASAKALNEALKLFKTHSPQTSAMLFTVDNEAGKIT
CLCQVPQNAANRGLKASEWVQQVSGLMDGKGGGKDMSAQATGKNVGCLQEALQLATSFAQ
LRLGEVKN
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atggactcaaccctaacagcaagtgaaatccggcagcggttcattgatttcttcaagaga
aatgagcacacgtatgtccactcatctgccaccattcctctagatgaccccacgttgctc
tttgccaatgctggcatgaaccagtttaaacccatcttcctgaacaccattgatccctca
cacccaatggcaaagctgagcagagctgctaatacccagaaatgcatccgagctggtggc
aagcacaatgaccttgatgacgtgggcaaggatgtctaccaccacaccttttttgaaatg
ttgggctcttggtcttttggagattattttaaggaattggcctgcaagatggcactggaa
cttctcacccaagagtttgggattccagtggaaagactttatgttacttactttggtggc
gatgaagcagctggcttagagccagacttagagtgcaaacagatctggcagaacctgggg
cttgatgaaaacaaaatccttcctggaaatatgaaggacaacttctgggagatgggtgac
acaggcccctgcggtccttgcagtgagatccactacgaccggattggtggccgggatgcc
gcccaccttgtcaaccaggatgatcccaacgtgctggagatctggaaccttgtgttcatc
cagtataacagggaggctgatggcgttctgaagccacttcccaagaagagcatcgacaca
ggaatgggtctggaacggctggtgtctgtgctgcagaacaaaatgtccaactacgacact
gatcttttcatcccttactttgaagccattcaaaagggcacaggggcccggccttacaca
gggaaagttggggctgacgatgttgacgggatcgacatggcctatcgggtgctggctgac
catgctcggaccatcactgtggcacttgcagatggcggccggcctgacaacacagggcgg
gggtatgtgctgagacggattctccgccgggcagttcgctattcccatgagaaactcaat
gccagcagggggttcttcgccaccttggtagatgtggtcgtccagtctctgggagatgct
ttccctgagctaaagaaggacccagatatggtcaaggacatcattaacgaagaggaagtg
caatttctcaagactctcagcagagggcggcgtatcctggaccggaagattcagagtctt
ggagactgcaagaccattcccggagacactgcttggcttctttatgacacttatgggttc
ccagtggacctcacgggactcattgctgaggagaaaggcatgttggtagatatggatggc
tttgaagaggagcggaaactggcccagctgaaatcccagggcaagggagctgggggagaa
gacctcatcatgctggacatttacgccatcgaggagctccgggagaaaggtctccaggca
acagatgattccccaaagtacaattaccactcggactccagcggtagttatgagtttgag
agcaccacggcaacagtgatggctctgcgcagggataagatgttcgtggatgaagtgtcc
acaggccaagagtgtggtgtggtgctagacaagacctgcttctatgccgagcaaggaggg
cagatctacgacgaaggctacctggtcaagctggatgacagcagtgaggataaaacagag
tttacggtgaagaacactcaggtgcgaggagggtatgtgctgcatgttggaaccatctac
ggcagcctgcgggtgggcgaccatgtccggctctttgtcgatgagccccgccggagaccc
gtcatgagcaaccacacagccacccacatactcaacttcgccctgcgctctgtgctcggg
gaggccgaccaacgaggatcgctggtggcacccgaccgcctgcggtttgacttcactgcc
aagggagccatgtccaccgcacagatcaagaaagccgaggagattgctaatgggatgatt
gaagatgccaagcctgtctacacccaggattgtcctttggcagcagcaaaagccatccag
ggcctgcgggctgtgtttgatgaaacttaccctgatcctgtgcgtgttgtctccattggg
gtccccgtggccaagttgttggatgaccccttgggtcctgctggctccctcacttctgtg
gagttctgtggaggaacgcacctgcagaattcaagtcacgcaggcgcttttgtgattgtg
agtgaagaggccattgccaagggcatccgacggatagtgggtgtcacgggtgcggaagct
cagaaggccctccggaaagcagagagcctgaagaattctctcttggacatggaggccaaa
gtgaaggcccagactgcaccaaacaaggatgtgcagaaggaaattgcagaccttggtgag
gctctggccaccgccgtcatcccccagtggcagaaagatgagttccgggaaagcctcaaa
gccctgaagaaagtcatggatgacctagaccgtgccagcaaagctgatgtccagaagcga
gtgttggagaagaccaagcagctcatcgacagcaatcccaaccaacccctggtcatcctg
gagatggagagcggcgcttcagccaaggccttgaatgaagccctgaagctcttcaagaca
cactcccctcagacatctgcaatgctctttactgtggataatgaggctggcaagatcaca
tgcttgtgtcaagtcccccagaatgcagccaaccggggcctgaaagccagcgagtgggta
cagcaggtgtctggcctgatggatggcaaaggtggtggcaaagatatgtccgctcaggcc
acgggcaaaaatgtgggctgcctgcaggaggcgctgcagttggccacttcttttgcccag
ctccgcctaggagaagtcaagaactga
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